Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_741 and PfGW456L13_742 are separated by 532 nucleotides PfGW456L13_742 and PfGW456L13_743 are separated by 180 nucleotides
PfGW456L13_741 - sodium/alanine transporter, at 844,241 to 845,692
_741
PfGW456L13_742 - Aspartate ammonia-lyase (EC 4.3.1.1), at 846,225 to 847,649
_742
PfGW456L13_743 - Transcriptional regulator, at 847,830 to 848,741
_743
Position (kb) 846
847
848 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.307 kb on + strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.308 kb on - strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.310 kb on + strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.311 kb on - strand, within PfGW456L13_741 at 845.355 kb on + strand, within PfGW456L13_741 at 845.355 kb on + strand, within PfGW456L13_741 at 845.355 kb on + strand, within PfGW456L13_741 at 845.356 kb on - strand, within PfGW456L13_741 at 845.356 kb on - strand, within PfGW456L13_741 at 845.356 kb on - strand, within PfGW456L13_741 at 845.575 kb on + strand at 845.575 kb on + strand at 845.575 kb on + strand at 845.575 kb on + strand at 845.575 kb on + strand at 845.575 kb on + strand at 845.575 kb on + strand at 845.576 kb on - strand at 845.576 kb on - strand at 845.576 kb on - strand at 845.576 kb on - strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.622 kb on + strand at 845.623 kb on - strand at 845.623 kb on - strand at 845.623 kb on - strand at 845.623 kb on - strand at 845.654 kb on + strand at 845.654 kb on + strand at 845.654 kb on + strand at 845.654 kb on + strand at 845.697 kb on + strand at 845.697 kb on + strand at 845.698 kb on - strand at 845.698 kb on - strand at 845.718 kb on + strand at 845.718 kb on + strand at 845.719 kb on - strand at 845.719 kb on - strand at 845.753 kb on + strand at 845.753 kb on + strand at 845.753 kb on + strand at 845.754 kb on - strand at 845.820 kb on + strand at 845.821 kb on - strand at 845.821 kb on - strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.823 kb on + strand at 845.824 kb on - strand at 845.824 kb on - strand at 845.824 kb on - strand at 845.889 kb on + strand at 845.890 kb on - strand at 845.890 kb on - strand at 845.892 kb on - strand at 845.892 kb on - strand at 845.979 kb on + strand at 846.028 kb on + strand at 846.035 kb on + strand at 846.035 kb on + strand at 846.035 kb on + strand at 846.035 kb on + strand at 846.036 kb on - strand at 846.036 kb on - strand at 846.036 kb on - strand at 846.104 kb on + strand at 846.105 kb on - strand at 846.105 kb on - strand at 846.105 kb on - strand at 846.105 kb on - strand at 846.207 kb on + strand at 846.207 kb on + strand at 846.207 kb on + strand at 846.207 kb on + strand at 846.208 kb on - strand at 846.208 kb on - strand at 846.208 kb on - strand at 846.208 kb on - strand at 846.208 kb on - strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.213 kb on + strand at 846.214 kb on - strand at 846.214 kb on - strand at 846.214 kb on - strand at 846.214 kb on - strand at 846.214 kb on - strand at 846.214 kb on - strand at 846.391 kb on + strand, within PfGW456L13_742 at 846.392 kb on - strand, within PfGW456L13_742 at 846.609 kb on - strand, within PfGW456L13_742 at 846.895 kb on - strand, within PfGW456L13_742 at 846.911 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.548 kb on - strand at 847.548 kb on - strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.579 kb on + strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.653 kb on - strand at 847.747 kb on - strand at 847.802 kb on + strand at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.277 kb on + strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.427 kb on + strand, within PfGW456L13_743 at 848.502 kb on + strand, within PfGW456L13_743 at 848.503 kb on - strand, within PfGW456L13_743
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 845,307 + PfGW456L13_741 0.73 -0.4 845,307 + PfGW456L13_741 0.73 +0.7 845,307 + PfGW456L13_741 0.73 +0.9 845,307 + PfGW456L13_741 0.73 +0.4 845,307 + PfGW456L13_741 0.73 +0.5 845,307 + PfGW456L13_741 0.73 +0.6 845,307 + PfGW456L13_741 0.73 +0.2 845,307 + PfGW456L13_741 0.73 -0.1 845,307 + PfGW456L13_741 0.73 -0.0 845,307 + PfGW456L13_741 0.73 -1.0 845,307 + PfGW456L13_741 0.73 +0.3 845,307 + PfGW456L13_741 0.73 -0.7 845,307 + PfGW456L13_741 0.73 -0.2 845,308 - PfGW456L13_741 0.73 -0.2 845,308 - PfGW456L13_741 0.73 +0.6 845,308 - PfGW456L13_741 0.73 -0.4 845,308 - PfGW456L13_741 0.73 -1.8 845,308 - PfGW456L13_741 0.73 +0.3 845,308 - PfGW456L13_741 0.73 +0.1 845,308 - PfGW456L13_741 0.73 -0.2 845,308 - PfGW456L13_741 0.73 +0.3 845,308 - PfGW456L13_741 0.73 +0.2 845,308 - PfGW456L13_741 0.73 +0.3 845,308 - PfGW456L13_741 0.73 +0.6 845,308 - PfGW456L13_741 0.73 +0.5 845,308 - PfGW456L13_741 0.73 +0.1 845,308 - PfGW456L13_741 0.73 +1.0 845,310 + PfGW456L13_741 0.74 +0.2 845,310 + PfGW456L13_741 0.74 -0.4 845,310 + PfGW456L13_741 0.74 -1.0 845,310 + PfGW456L13_741 0.74 -0.3 845,310 + PfGW456L13_741 0.74 -0.6 845,310 + PfGW456L13_741 0.74 +0.2 845,311 - PfGW456L13_741 0.74 -0.5 845,311 - PfGW456L13_741 0.74 -0.8 845,311 - PfGW456L13_741 0.74 -0.6 845,311 - PfGW456L13_741 0.74 +0.2 845,311 - PfGW456L13_741 0.74 -0.1 845,311 - PfGW456L13_741 0.74 -0.4 845,355 + PfGW456L13_741 0.77 +1.2 845,355 + PfGW456L13_741 0.77 -0.4 845,355 + PfGW456L13_741 0.77 -1.0 845,356 - PfGW456L13_741 0.77 +1.1 845,356 - PfGW456L13_741 0.77 +0.9 845,356 - PfGW456L13_741 0.77 +0.5 845,575 + -0.6 845,575 + -0.4 845,575 + +0.6 845,575 + -0.8 845,575 + -0.0 845,575 + -0.0 845,575 + +0.5 845,576 - +0.4 845,576 - +0.7 845,576 - -0.0 845,576 - +0.1 845,622 + -0.7 845,622 + -1.3 845,622 + -0.2 845,622 + -1.3 845,622 + +0.7 845,622 + +0.2 845,622 + -0.5 845,622 + +0.4 845,622 + -1.0 845,622 + +0.4 845,623 - -0.3 845,623 - -0.2 845,623 - +1.0 845,623 - +0.1 845,654 + +0.5 845,654 + -1.7 845,654 + +0.4 845,654 + -0.6 845,697 + +0.2 845,697 + -0.2 845,698 - -1.0 845,698 - -0.4 845,718 + +0.6 845,718 + -1.6 845,719 - -0.6 845,719 - -0.8 845,753 + +0.4 845,753 + +0.4 845,753 + +0.3 845,754 - -1.5 845,820 + -0.2 845,821 - -0.6 845,821 - -1.3 845,823 + -0.8 845,823 + +0.2 845,823 + +0.3 845,823 + +0.0 845,823 + +0.2 845,823 + +0.5 845,823 + -0.9 845,823 + -1.3 845,823 + -0.4 845,824 - +0.4 845,824 - -1.4 845,824 - -0.7 845,889 + -0.6 845,890 - -2.3 845,890 - -1.7 845,892 - -0.4 845,892 - -2.6 845,979 + +0.2 846,028 + +0.1 846,035 + +0.8 846,035 + -0.7 846,035 + +1.0 846,035 + +0.6 846,036 - +0.7 846,036 - +0.3 846,036 - +0.6 846,104 + +0.2 846,105 - -1.9 846,105 - -1.1 846,105 - -0.6 846,105 - -1.5 846,207 + -0.8 846,207 + +0.7 846,207 + -2.0 846,207 + +0.2 846,208 - -1.2 846,208 - +0.9 846,208 - +0.0 846,208 - -0.3 846,208 - -0.2 846,213 + +0.2 846,213 + -0.6 846,213 + -0.4 846,213 + -0.8 846,213 + +1.0 846,213 + +0.1 846,213 + -0.5 846,214 - +1.0 846,214 - -1.6 846,214 - +0.2 846,214 - -0.8 846,214 - +0.0 846,214 - -0.7 846,391 + PfGW456L13_742 0.12 +0.3 846,392 - PfGW456L13_742 0.12 -1.7 846,609 - PfGW456L13_742 0.27 -2.4 846,895 - PfGW456L13_742 0.47 -2.0 846,911 - PfGW456L13_742 0.48 -1.1 847,256 - PfGW456L13_742 0.72 -0.2 847,256 - PfGW456L13_742 0.72 -1.7 847,256 - PfGW456L13_742 0.72 -1.4 847,262 - PfGW456L13_742 0.73 -1.9 847,262 - PfGW456L13_742 0.73 -2.6 847,548 - -1.0 847,548 - -2.6 847,576 + +1.2 847,576 + -0.9 847,576 + +1.2 847,576 + -0.6 847,576 + -0.6 847,577 - -0.2 847,577 - -1.2 847,577 - -1.9 847,577 - -2.1 847,577 - -0.9 847,577 - -0.8 847,579 + -3.1 847,580 - +0.1 847,580 - -1.6 847,580 - +1.8 847,653 - -0.7 847,747 - +0.6 847,802 + +0.4 848,068 + PfGW456L13_743 0.26 +0.1 848,068 + PfGW456L13_743 0.26 +1.2 848,068 + PfGW456L13_743 0.26 -0.4 848,069 - PfGW456L13_743 0.26 +0.3 848,069 - PfGW456L13_743 0.26 -0.3 848,069 - PfGW456L13_743 0.26 -0.3 848,069 - PfGW456L13_743 0.26 -0.2 848,069 - PfGW456L13_743 0.26 +0.2 848,069 - PfGW456L13_743 0.26 +1.6 848,069 - PfGW456L13_743 0.26 -0.6 848,069 - PfGW456L13_743 0.26 +0.6 848,277 + PfGW456L13_743 0.49 +0.3 848,278 - PfGW456L13_743 0.49 +0.3 848,278 - PfGW456L13_743 0.49 -1.0 848,427 + PfGW456L13_743 0.65 -0.3 848,502 + PfGW456L13_743 0.74 -1.5 848,503 - PfGW456L13_743 0.74 +0.3
Or see this region's nucleotide sequence