Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4192 and PfGW456L13_4193 are separated by 3 nucleotides PfGW456L13_4193 and PfGW456L13_4194 are separated by 181 nucleotides PfGW456L13_4194 and PfGW456L13_4195 are separated by 207 nucleotides
PfGW456L13_4192 - Septum site-determining protein MinD, at 4,703,697 to 4,704,509
_4192
PfGW456L13_4193 - Cell division topological specificity factor MinE, at 4,704,513 to 4,704,767
_4193
PfGW456L13_4194 - Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70), at 4,704,949 to 4,705,584
_4194
PfGW456L13_4195 - Aspartyl aminopeptidase, at 4,705,792 to 4,707,081
_4195
Position (kb) 4704
4705
4706 Strain fitness (log2 ratio) -1
0
1
2 at 4704.840 kb on + strand at 4704.840 kb on + strand at 4704.841 kb on - strand at 4704.861 kb on + strand at 4704.894 kb on + strand at 4704.894 kb on + strand at 4704.894 kb on + strand at 4704.894 kb on + strand at 4704.895 kb on - strand at 4704.895 kb on - strand at 4704.895 kb on - strand at 4704.934 kb on + strand at 4704.935 kb on - strand at 4705.214 kb on - strand, within PfGW456L13_4194 at 4705.465 kb on + strand, within PfGW456L13_4194 at 4705.466 kb on - strand, within PfGW456L13_4194 at 4705.466 kb on - strand, within PfGW456L13_4194 at 4705.466 kb on - strand, within PfGW456L13_4194 at 4705.754 kb on + strand at 4705.754 kb on + strand at 4705.759 kb on + strand at 4705.760 kb on - strand at 4705.760 kb on - strand at 4705.760 kb on - strand at 4705.786 kb on + strand at 4705.786 kb on + strand at 4705.786 kb on + strand at 4705.787 kb on - strand at 4705.787 kb on - strand at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.948 kb on + strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4705.949 kb on - strand, within PfGW456L13_4195 at 4706.117 kb on - strand, within PfGW456L13_4195 at 4706.434 kb on + strand, within PfGW456L13_4195 at 4706.435 kb on - strand, within PfGW456L13_4195 at 4706.515 kb on + strand, within PfGW456L13_4195 at 4706.516 kb on - strand, within PfGW456L13_4195 at 4706.516 kb on - strand, within PfGW456L13_4195
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 4,704,840 + +0.1 4,704,840 + -0.9 4,704,841 - +1.0 4,704,861 + -0.2 4,704,894 + +1.4 4,704,894 + -0.2 4,704,894 + +0.4 4,704,894 + +0.4 4,704,895 - +2.0 4,704,895 - -0.1 4,704,895 - -0.9 4,704,934 + +0.9 4,704,935 - +1.2 4,705,214 - PfGW456L13_4194 0.42 +0.9 4,705,465 + PfGW456L13_4194 0.81 -0.6 4,705,466 - PfGW456L13_4194 0.81 +1.4 4,705,466 - PfGW456L13_4194 0.81 +0.2 4,705,466 - PfGW456L13_4194 0.81 +1.1 4,705,754 + -0.2 4,705,754 + +1.0 4,705,759 + -0.4 4,705,760 - +1.5 4,705,760 - -0.1 4,705,760 - +0.3 4,705,786 + -0.4 4,705,786 + +0.5 4,705,786 + +0.6 4,705,787 - +1.6 4,705,787 - -0.1 4,705,948 + PfGW456L13_4195 0.12 +0.2 4,705,948 + PfGW456L13_4195 0.12 +0.2 4,705,948 + PfGW456L13_4195 0.12 -1.6 4,705,948 + PfGW456L13_4195 0.12 +0.6 4,705,948 + PfGW456L13_4195 0.12 -0.5 4,705,948 + PfGW456L13_4195 0.12 -0.3 4,705,948 + PfGW456L13_4195 0.12 +1.0 4,705,948 + PfGW456L13_4195 0.12 +0.0 4,705,949 - PfGW456L13_4195 0.12 -0.0 4,705,949 - PfGW456L13_4195 0.12 -0.1 4,705,949 - PfGW456L13_4195 0.12 -0.0 4,705,949 - PfGW456L13_4195 0.12 -0.1 4,705,949 - PfGW456L13_4195 0.12 +0.1 4,705,949 - PfGW456L13_4195 0.12 -0.4 4,705,949 - PfGW456L13_4195 0.12 +1.4 4,706,117 - PfGW456L13_4195 0.25 +0.3 4,706,434 + PfGW456L13_4195 0.50 +0.3 4,706,435 - PfGW456L13_4195 0.50 -0.4 4,706,515 + PfGW456L13_4195 0.56 +0.2 4,706,516 - PfGW456L13_4195 0.56 +1.4 4,706,516 - PfGW456L13_4195 0.56 +0.6
Or see this region's nucleotide sequence