Experiment: Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_413 and PfGW456L13_414 are separated by 448 nucleotides PfGW456L13_414 and PfGW456L13_415 are separated by 433 nucleotides PfGW456L13_415 and PfGW456L13_416 are separated by 84 nucleotides
PfGW456L13_413 - ATP-dependent DNA helicase, RecQ family, at 475,517 to 477,451
_413
PfGW456L13_414 - hypothetical protein, at 477,900 to 478,190
_414
PfGW456L13_415 - hypothetical protein, at 478,624 to 478,923
_415
PfGW456L13_416 - Transcriptional regulator, Cro/CI family, at 479,008 to 479,298
_416
Position (kb) 477
478
479 Strain fitness (log2 ratio) -2
-1
0
1
2 at 476.986 kb on - strand, within PfGW456L13_413 at 476.986 kb on - strand, within PfGW456L13_413 at 477.003 kb on + strand, within PfGW456L13_413 at 477.003 kb on + strand, within PfGW456L13_413 at 477.019 kb on + strand, within PfGW456L13_413 at 477.019 kb on + strand, within PfGW456L13_413 at 477.020 kb on - strand, within PfGW456L13_413 at 477.020 kb on - strand, within PfGW456L13_413 at 477.074 kb on + strand, within PfGW456L13_413 at 477.075 kb on - strand, within PfGW456L13_413 at 477.075 kb on - strand, within PfGW456L13_413 at 477.075 kb on - strand, within PfGW456L13_413 at 477.075 kb on - strand, within PfGW456L13_413 at 477.311 kb on + strand at 477.312 kb on - strand at 477.318 kb on + strand at 477.319 kb on - strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.451 kb on + strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.452 kb on - strand at 477.547 kb on + strand at 477.547 kb on + strand at 477.547 kb on + strand at 477.547 kb on + strand at 477.548 kb on - strand at 477.548 kb on - strand at 477.664 kb on - strand at 477.670 kb on + strand at 477.693 kb on - strand at 477.743 kb on - strand at 477.765 kb on + strand at 477.765 kb on + strand at 477.765 kb on + strand at 477.765 kb on + strand at 477.765 kb on + strand at 477.766 kb on - strand at 477.766 kb on - strand at 477.769 kb on + strand at 477.769 kb on + strand at 477.769 kb on + strand at 477.769 kb on + strand at 477.770 kb on - strand at 477.770 kb on - strand at 477.774 kb on + strand at 477.774 kb on + strand at 477.775 kb on - strand at 477.775 kb on - strand at 477.775 kb on - strand at 477.824 kb on + strand at 477.824 kb on + strand at 477.825 kb on - strand at 477.825 kb on - strand at 477.826 kb on + strand at 477.826 kb on + strand at 477.826 kb on + strand at 477.827 kb on - strand at 477.827 kb on - strand at 478.027 kb on + strand, within PfGW456L13_414 at 478.027 kb on + strand, within PfGW456L13_414 at 478.027 kb on + strand, within PfGW456L13_414 at 478.027 kb on + strand, within PfGW456L13_414 at 478.027 kb on + strand, within PfGW456L13_414 at 478.060 kb on - strand, within PfGW456L13_414 at 478.120 kb on - strand, within PfGW456L13_414 at 478.288 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.308 kb on + strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.309 kb on - strand at 478.330 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.378 kb on + strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.379 kb on - strand at 478.380 kb on + strand at 478.381 kb on - strand at 478.381 kb on - strand at 478.381 kb on - strand at 478.438 kb on + strand at 478.438 kb on + strand at 478.439 kb on - strand at 478.439 kb on - strand at 478.453 kb on + strand at 478.453 kb on + strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.454 kb on - strand at 478.485 kb on + strand at 478.486 kb on - strand at 478.486 kb on - strand at 478.601 kb on + strand at 478.616 kb on + strand at 478.616 kb on + strand at 478.616 kb on + strand at 478.616 kb on + strand at 478.620 kb on + strand at 478.621 kb on - strand at 478.621 kb on - strand at 478.657 kb on + strand, within PfGW456L13_415 at 478.657 kb on + strand, within PfGW456L13_415 at 478.657 kb on + strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.661 kb on + strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.847 kb on - strand, within PfGW456L13_415 at 478.921 kb on + strand at 478.953 kb on + strand at 478.953 kb on + strand at 478.953 kb on + strand at 478.954 kb on - strand at 478.979 kb on - strand at 479.004 kb on - strand at 479.127 kb on + strand, within PfGW456L13_416 at 479.133 kb on - strand, within PfGW456L13_416 at 479.166 kb on - strand, within PfGW456L13_416
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.032 mg/ml remove 476,986 - PfGW456L13_413 0.76 +0.3 476,986 - PfGW456L13_413 0.76 +0.6 477,003 + PfGW456L13_413 0.77 +0.8 477,003 + PfGW456L13_413 0.77 -0.2 477,019 + PfGW456L13_413 0.78 +0.0 477,019 + PfGW456L13_413 0.78 +1.2 477,020 - PfGW456L13_413 0.78 -0.2 477,020 - PfGW456L13_413 0.78 +0.0 477,074 + PfGW456L13_413 0.80 +0.4 477,075 - PfGW456L13_413 0.81 +0.2 477,075 - PfGW456L13_413 0.81 +1.2 477,075 - PfGW456L13_413 0.81 +0.6 477,075 - PfGW456L13_413 0.81 -0.2 477,311 + +0.2 477,312 - -0.0 477,318 + +2.2 477,319 - +0.0 477,451 + -0.4 477,451 + +0.6 477,451 + -2.0 477,451 + +0.8 477,451 + -0.1 477,451 + -0.6 477,451 + +0.2 477,451 + -0.2 477,451 + -0.3 477,452 - +0.5 477,452 - +0.1 477,452 - +0.2 477,452 - -0.1 477,452 - +0.3 477,452 - +0.3 477,452 - +0.6 477,452 - +0.1 477,452 - -0.5 477,547 + +0.4 477,547 + +0.1 477,547 + -0.9 477,547 + +0.2 477,548 - +0.7 477,548 - +0.5 477,664 - -0.1 477,670 + +0.4 477,693 - -0.3 477,743 - -0.6 477,765 + +0.3 477,765 + -0.5 477,765 + +0.6 477,765 + -1.2 477,765 + +0.5 477,766 - +0.0 477,766 - +0.2 477,769 + +0.6 477,769 + -0.0 477,769 + +0.6 477,769 + +0.3 477,770 - +0.7 477,770 - +1.8 477,774 + -2.0 477,774 + -1.6 477,775 - -1.2 477,775 - +0.4 477,775 - -0.3 477,824 + -0.6 477,824 + -0.9 477,825 - -1.1 477,825 - +1.2 477,826 + -0.4 477,826 + +0.2 477,826 + +0.5 477,827 - +0.2 477,827 - -0.2 478,027 + PfGW456L13_414 0.44 +1.3 478,027 + PfGW456L13_414 0.44 +0.6 478,027 + PfGW456L13_414 0.44 +0.9 478,027 + PfGW456L13_414 0.44 -0.4 478,027 + PfGW456L13_414 0.44 +0.2 478,060 - PfGW456L13_414 0.55 -0.5 478,120 - PfGW456L13_414 0.76 +0.7 478,288 + +0.9 478,308 + +0.4 478,308 + -1.7 478,308 + -0.6 478,308 + -1.0 478,308 + -0.1 478,308 + +0.1 478,308 + -0.5 478,308 + -0.0 478,308 + +0.2 478,308 + +0.1 478,308 + -0.7 478,309 - -0.8 478,309 - +0.1 478,309 - -0.5 478,309 - -0.8 478,309 - +0.7 478,309 - -2.7 478,309 - -0.1 478,309 - +0.6 478,330 + +0.0 478,378 + -0.1 478,378 + -0.1 478,378 + -0.5 478,378 + +0.1 478,378 + +0.2 478,378 + +0.3 478,378 + -0.7 478,379 - +1.0 478,379 - -0.2 478,379 - -1.3 478,379 - -1.4 478,379 - +0.1 478,379 - +0.2 478,379 - -0.3 478,380 + +0.2 478,381 - +0.2 478,381 - +0.9 478,381 - +1.1 478,438 + -0.5 478,438 + +0.0 478,439 - -0.1 478,439 - +0.5 478,453 + -0.7 478,453 + +0.7 478,454 - -0.0 478,454 - +0.3 478,454 - +0.2 478,454 - -0.9 478,454 - -1.5 478,454 - +0.1 478,454 - +1.4 478,454 - +0.4 478,485 + +0.0 478,486 - -0.6 478,486 - -0.3 478,601 + +0.2 478,616 + -1.7 478,616 + +0.0 478,616 + -0.1 478,616 + -1.1 478,620 + +0.2 478,621 - -0.9 478,621 - +0.1 478,657 + PfGW456L13_415 0.11 -0.6 478,657 + PfGW456L13_415 0.11 +0.6 478,657 + PfGW456L13_415 0.11 +0.2 478,658 - PfGW456L13_415 0.11 +0.8 478,658 - PfGW456L13_415 0.11 -0.1 478,658 - PfGW456L13_415 0.11 -0.1 478,658 - PfGW456L13_415 0.11 -0.4 478,661 + PfGW456L13_415 0.12 +1.3 478,662 - PfGW456L13_415 0.13 +0.1 478,662 - PfGW456L13_415 0.13 -1.4 478,662 - PfGW456L13_415 0.13 +0.4 478,662 - PfGW456L13_415 0.13 -0.0 478,662 - PfGW456L13_415 0.13 +0.6 478,846 + PfGW456L13_415 0.74 -0.6 478,846 + PfGW456L13_415 0.74 -0.5 478,846 + PfGW456L13_415 0.74 -0.5 478,847 - PfGW456L13_415 0.74 +0.5 478,921 + -0.4 478,953 + +0.6 478,953 + +0.3 478,953 + +0.6 478,954 - -0.2 478,979 - +0.3 479,004 - -0.1 479,127 + PfGW456L13_416 0.41 -0.1 479,133 - PfGW456L13_416 0.43 +0.5 479,166 - PfGW456L13_416 0.54 +0.5
Or see this region's nucleotide sequence