Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1083

Experiment: Paraquat dichloride 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.032 mg/ml
1,201,536	-		PfGW456L13_1082	0.58	-1.4
1,201,536	-		PfGW456L13_1082	0.58	-0.6
1,201,634	+		PfGW456L13_1082	0.64	-0.3
1,201,867	-		PfGW456L13_1082	0.77	-3.5
1,201,874	+		PfGW456L13_1082	0.78	-3.4
1,201,874	+		PfGW456L13_1082	0.78	-2.4
1,201,875	-		PfGW456L13_1082	0.78	-4.1
1,201,892	+		PfGW456L13_1082	0.79	-2.1
1,201,934	+		PfGW456L13_1082	0.81	-2.2
1,201,935	-		PfGW456L13_1082	0.81	-0.7
1,201,935	-		PfGW456L13_1082	0.81	-1.2
1,201,958	+		PfGW456L13_1082	0.83	-0.2
1,201,958	+		PfGW456L13_1082	0.83	-2.8
1,201,958	+		PfGW456L13_1082	0.83	-1.4
1,201,958	+		PfGW456L13_1082	0.83	-1.7
1,201,958	+		PfGW456L13_1082	0.83	-2.3
1,201,958	+		PfGW456L13_1082	0.83	-2.5
1,201,958	+		PfGW456L13_1082	0.83	-1.6
1,201,959	-		PfGW456L13_1082	0.83	-1.9
1,201,959	-		PfGW456L13_1082	0.83	-0.8
1,201,959	-		PfGW456L13_1082	0.83	-1.5
1,201,959	-		PfGW456L13_1082	0.83	-2.4
1,201,959	-		PfGW456L13_1082	0.83	-2.7
1,201,959	-		PfGW456L13_1082	0.83	-1.3
1,202,054	+		PfGW456L13_1082	0.88	-3.4
1,202,054	+		PfGW456L13_1082	0.88	-1.4
1,202,055	-		PfGW456L13_1082	0.88	-2.3
1,202,066	+		PfGW456L13_1082	0.89	-2.1
1,202,129	+				-2.7
1,202,231	+				-1.9
1,202,231	+				-1.9
1,202,232	-				-1.0
1,202,232	-				-1.9
1,202,232	-				-2.3
1,202,232	-				-2.9
1,202,369	+				-1.9
1,202,452	+				-0.6
1,202,452	+				-2.1
1,202,453	-				+2.2
1,202,456	+				-1.1
1,202,456	+				-0.7
1,202,456	+				-2.0
1,202,456	+				-1.7
1,202,456	+				-2.6
1,202,456	+				-1.1
1,202,456	+				-1.9
1,202,456	+				-2.5
1,202,457	-				+2.2
1,202,457	-				+2.7
1,202,457	-				+2.4
1,202,457	-				+2.8
1,202,457	-				+2.7
1,202,457	-				+2.6
1,202,457	-				-1.7
1,202,471	+				-2.0
1,202,471	+				-2.5
1,202,471	+				-1.6
1,202,472	-				-1.2
1,202,472	-				-3.7
1,202,472	-				-2.2
1,202,561	+				-1.9
1,202,736	-		PfGW456L13_1083	0.19	-1.0
1,202,736	-		PfGW456L13_1083	0.19	-2.3
1,202,910	-		PfGW456L13_1083	0.31	-2.9
1,202,910	-		PfGW456L13_1083	0.31	-2.4
1,202,910	-				-0.9
1,203,089	+		PfGW456L13_1083	0.43	-2.8
1,203,089	+		PfGW456L13_1083	0.43	-2.6
1,203,090	-		PfGW456L13_1083	0.43	-2.5
1,203,090	-		PfGW456L13_1083	0.43	-1.0
1,203,353	+		PfGW456L13_1083	0.61	-1.7
1,203,353	+		PfGW456L13_1083	0.61	-1.7
1,203,353	+		PfGW456L13_1083	0.61	-0.7
1,203,354	-		PfGW456L13_1083	0.61	-3.4
1,203,354	-		PfGW456L13_1083	0.61	-1.9
1,203,468	-		PfGW456L13_1083	0.69	-1.9
1,203,468	-		PfGW456L13_1083	0.69	-2.6
1,203,519	-		PfGW456L13_1083	0.72	-2.0
1,203,519	-		PfGW456L13_1083	0.72	-1.2
1,203,568	+		PfGW456L13_1083	0.76	-0.9
1,203,581	+		PfGW456L13_1083	0.76	-2.3
1,203,582	-		PfGW456L13_1083	0.77	-0.7
1,203,582	-		PfGW456L13_1083	0.77	-0.8
1,203,582	-		PfGW456L13_1083	0.77	-2.3
1,203,584	+		PfGW456L13_1083	0.77	-1.0
1,203,584	+		PfGW456L13_1083	0.77	-2.3
1,203,584	+		PfGW456L13_1083	0.77	-1.7
1,203,620	+		PfGW456L13_1083	0.79	-2.6
1,203,804	+				-1.7
1,203,899	+				-1.6
1,203,899	+				-1.2
1,203,899	+				-1.1
1,203,900	-				-1.3
1,203,900	-				-0.6
1,203,927	+				-0.9
1,203,928	-				-1.0
1,203,928	-				-0.4
1,203,928	-				-0.0
1,203,947	+				-0.9
1,203,947	+				-2.9
1,203,947	+				-0.2
1,203,947	+				-1.9
1,203,947	+				-0.6
1,203,947	+				-1.7
1,203,947	+				-3.6
1,203,947	+				-1.0
1,203,948	-				-2.9
1,203,948	-				+0.4
1,203,948	-				-1.0
1,203,948	-				-0.1
1,203,948	-				-1.1
1,203,948	-				-1.5
1,203,948	-				-2.8
1,203,948	-				-1.2
1,203,948	-				+0.0
1,203,948	-				-1.2
1,203,948	-				-1.7
1,203,948	-				-0.8
1,203,980	+				-3.2
1,203,980	+				-3.2
1,203,980	+				-0.3
1,203,980	+				-1.1
1,203,980	+				-0.7
1,203,980	+				-1.0
1,203,981	-				-1.7
1,203,981	-				-1.9
1,203,981	-				-1.0
1,203,991	+				-1.3
1,203,991	+				-4.4
1,203,992	-				-0.4
1,203,992	-				+1.1
1,204,017	-				-0.9
1,204,024	+				-1.6
1,204,025	-				+3.7
1,204,025	-				-2.7
1,204,025	-				-2.1
1,204,025	-				-4.1
1,204,025	-				-3.7
1,204,025	-				-0.2
1,204,030	+				-1.0
1,204,030	+				-2.3
1,204,030	+				-2.9
1,204,030	+				-1.3
1,204,031	-				+0.1
1,204,031	-				-3.9
1,204,183	+		PfGW456L13_1084	0.32	-3.3
1,204,183	+		PfGW456L13_1084	0.32	-3.9
1,204,438	+		PfGW456L13_1084	0.75	-3.8
1,204,439	-		PfGW456L13_1084	0.76	-2.8
1,204,439	-		PfGW456L13_1084	0.76	-1.1
1,204,439	-		PfGW456L13_1084	0.76	-3.0
1,204,598	+				-2.4
1,204,645	+				-1.4
1,204,645	+				-1.7
1,204,645	+				-0.4
1,204,645	+				-2.8
1,204,646	-				+3.5
1,204,646	-				+3.1
1,204,722	-				+3.7
1,204,727	+				-2.7
1,204,727	+				-0.2
1,204,727	+				-4.8
1,204,727	+				-3.2
1,204,727	+				-2.7
1,204,727	+				-2.4
1,204,728	-				+0.6
1,204,728	-				+3.7
1,204,728	-				+3.6
1,204,728	-				+3.7
1,204,728	-				+4.3
1,204,728	-				+3.4
1,204,728	-				+3.4
1,204,728	-				+3.5
1,204,728	-				+3.0
1,204,728	-				+3.4
1,204,728	-				+3.7
1,204,728	-				+4.3
1,204,728	-				+3.3
1,204,766	+				-0.9
1,204,766	+				-2.4
1,204,768	+				-2.8
1,204,768	+				-1.4
1,204,769	-				+3.2
1,204,769	-				+3.7
1,204,814	+				-1.3
1,204,814	+				-3.4
1,204,814	+				-3.2
1,204,814	+				-1.4
1,204,814	+				-2.6
1,204,814	+				-4.2
1,204,814	+				-2.8
1,204,814	+				-3.1
1,204,814	+				-4.6
1,204,815	-				+4.1
1,204,815	-				+3.6
1,204,815	-				+3.4
1,204,815	-				+3.1
1,204,815	-				+3.1
1,204,816	+				-2.3
1,204,816	+				-5.1
1,204,817	-				+3.4
1,204,817	-				+3.6
1,204,817	-				+3.0
1,204,817	-				+4.0
1,204,858	-				+3.5
1,204,924	+				+2.8
1,204,927	+				+3.5