Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26180

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
5,851,119	-		PFLU_RS26175	0.45	-1.2
5,851,205	+		PFLU_RS26175	0.52	-0.8
5,851,206	-		PFLU_RS26175	0.52	+2.3
5,851,253	+		PFLU_RS26175	0.55	+1.5
5,851,253	+		PFLU_RS26175	0.55	-0.1
5,851,254	-		PFLU_RS26175	0.56	+1.0
5,851,277	-		PFLU_RS26175	0.57	+0.2
5,851,307	+		PFLU_RS26175	0.59	-2.0
5,851,307	+		PFLU_RS26175	0.59	-0.3
5,851,308	-		PFLU_RS26175	0.60	+0.9
5,851,364	-		PFLU_RS26175	0.64	+1.6
5,851,384	-		PFLU_RS26175	0.65	-0.5
5,851,583	+		PFLU_RS26175	0.80	+1.3
5,851,583	+		PFLU_RS26175	0.80	-0.6
5,851,583	+		PFLU_RS26175	0.80	+1.3
5,851,583	+		PFLU_RS26175	0.80	+0.1
5,851,583	+		PFLU_RS26175	0.80	-0.8
5,851,583	+		PFLU_RS26175	0.80	+0.7
5,851,721	+				-0.4
5,851,721	+				-0.0
5,851,722	-				-0.6
5,851,755	+				-1.9
5,851,755	+				+0.6
5,851,755	+				+0.4
5,851,755	+				+1.0
5,851,755	+				-0.0
5,851,755	+				+0.4
5,851,755	+				+1.2
5,851,756	-				-1.1
5,851,756	-				-0.4
5,851,756	-				-1.9
5,851,756	-				+1.2
5,851,756	-				+2.5
5,851,756	-				+0.7
5,851,759	+				+1.4
5,851,759	+				+1.4
5,851,759	+				+0.6
5,851,759	+				+1.2
5,851,759	+				+1.0
5,851,759	+				-1.4
5,851,760	-				+0.7
5,851,760	-				+0.9
5,851,760	-				-0.0
5,851,760	-				+1.0
5,851,760	-				+0.5
5,851,760	-				+0.0
5,851,760	-				-1.7
5,851,876	+				+0.5
5,851,877	-				+0.6
5,851,899	-				+0.7
5,851,964	+				-0.4
5,851,966	+				+0.6
5,851,967	-				-0.1
5,851,980	+				-0.3
5,852,017	+				-0.4
5,852,018	-				+0.9
5,852,023	+				-1.7
5,852,023	+				-2.1
5,852,023	+				-1.3
5,852,024	-				+2.6
5,852,024	-				+0.5
5,852,024	-				+0.4
5,852,024	-				-1.0
5,852,027	+				-0.3
5,852,027	+				+0.1
5,852,027	+				-1.4
5,852,028	-				+1.1
5,852,028	-				+0.9
5,852,128	+				+2.1
5,852,128	+				-0.1
5,852,128	+				-0.8
5,852,129	-				-0.3
5,852,169	+				+1.2
5,852,183	+				-1.5
5,852,184	-				+0.6
5,852,184	-				-0.6
5,852,192	+				-0.7
5,852,192	+				+0.4
5,852,192	+				+0.5
5,852,192	+				-1.4
5,852,192	+				-0.7
5,852,192	+				+1.6
5,852,192	+				-1.8
5,852,192	+				+0.4
5,852,192	+				-1.8
5,852,192	+				-0.9
5,852,192	+				+1.3
5,852,193	-				-0.4
5,852,193	-				-1.8
5,852,193	-				-1.0
5,852,193	-				+0.2
5,852,193	-				-0.3
5,852,193	-				-1.0
5,852,193	-				-0.9
5,852,196	+				+0.0
5,852,196	+				-2.4
5,852,196	+				+0.3
5,852,196	+				-0.9
5,852,196	+				+0.3
5,852,196	+				+0.4
5,852,196	+				+1.1
5,852,196	+				-2.2
5,852,196	+				-2.3
5,852,197	-				+0.9
5,852,197	-				-0.2
5,852,197	-				-0.8
5,852,197	-				-1.1
5,852,197	-				+0.6
5,852,197	-				-0.8
5,852,197	-				-0.8
5,852,197	-				-0.0
5,852,197	-				+1.3
5,852,197	-				+0.6
5,852,231	+				-1.6
5,852,232	-				+1.1
5,852,232	-				+1.0
5,852,492	+		PFLU_RS26180	0.23	-0.7
5,852,492	+		PFLU_RS26180	0.23	-1.3
5,852,492	+		PFLU_RS26180	0.23	-0.6
5,852,492	+		PFLU_RS26180	0.23	+0.1
5,852,492	+		PFLU_RS26180	0.23	+2.0
5,852,492	+		PFLU_RS26180	0.23	-1.2
5,852,492	+		PFLU_RS26180	0.23	+0.6
5,852,492	+		PFLU_RS26180	0.23	+0.2
5,852,492	+		PFLU_RS26180	0.23	+1.4
5,852,492	+		PFLU_RS26180	0.23	+0.7
5,852,492	+		PFLU_RS26180	0.23	-1.1
5,852,492	+		PFLU_RS26180	0.23	+0.5
5,852,492	+		PFLU_RS26180	0.23	+0.1
5,852,492	+		PFLU_RS26180	0.23	+0.7
5,852,492	+		PFLU_RS26180	0.23	+1.2
5,852,492	+		PFLU_RS26180	0.23	-2.3
5,852,493	-		PFLU_RS26180	0.23	-0.4
5,852,493	-		PFLU_RS26180	0.23	-0.1
5,852,493	-		PFLU_RS26180	0.23	+0.3
5,852,493	-		PFLU_RS26180	0.23	-0.1
5,852,493	-		PFLU_RS26180	0.23	+0.3
5,852,493	-		PFLU_RS26180	0.23	-1.4
5,852,493	-		PFLU_RS26180	0.23	-0.1
5,852,493	-		PFLU_RS26180	0.23	-0.5
5,852,493	-		PFLU_RS26180	0.23	+0.2
5,852,493	-		PFLU_RS26180	0.23	+0.3
5,852,493	-		PFLU_RS26180	0.23	+1.0
5,852,493	-		PFLU_RS26180	0.23	+0.1
5,852,493	-		PFLU_RS26180	0.23	-2.0
5,852,493	-		PFLU_RS26180	0.23	+2.2
5,852,493	-		PFLU_RS26180	0.23	+0.2
5,852,493	-		PFLU_RS26180	0.23	-0.1
5,852,493	-		PFLU_RS26180	0.23	-0.1
5,852,493	-		PFLU_RS26180	0.23	+0.9
5,852,493	-		PFLU_RS26180	0.23	-1.4
5,852,493	-		PFLU_RS26180	0.23	-0.2
5,852,493	-		PFLU_RS26180	0.23	+2.5
5,852,493	-		PFLU_RS26180	0.23	-0.6
5,852,496	+		PFLU_RS26180	0.23	-0.1
5,852,496	+		PFLU_RS26180	0.23	+0.6
5,852,497	-		PFLU_RS26180	0.23	-1.0
5,852,497	-		PFLU_RS26180	0.23	+1.7
5,852,497	-		PFLU_RS26180	0.23	-1.2
5,852,513	+		PFLU_RS26180	0.24	-0.5
5,852,513	+		PFLU_RS26180	0.24	+0.7
5,852,513	+		PFLU_RS26180	0.24	+0.6
5,852,514	-		PFLU_RS26180	0.24	-0.9
5,852,514	-		PFLU_RS26180	0.24	+0.0
5,852,514	-		PFLU_RS26180	0.24	-1.0
5,852,514	-		PFLU_RS26180	0.24	-0.8
5,852,514	-		PFLU_RS26180	0.24	-0.9
5,852,688	+		PFLU_RS26180	0.35	-0.6
5,852,774	+		PFLU_RS26180	0.40	+0.6
5,852,837	+		PFLU_RS26180	0.44	+0.2
5,852,837	+		PFLU_RS26180	0.44	-1.2
5,852,837	+		PFLU_RS26180	0.44	-1.9
5,852,837	+		PFLU_RS26180	0.44	+0.1
5,852,837	+		PFLU_RS26180	0.44	+0.7
5,852,837	+		PFLU_RS26180	0.44	+2.5
5,852,837	+		PFLU_RS26180	0.44	-2.6
5,852,837	+		PFLU_RS26180	0.44	-1.2
5,852,837	+		PFLU_RS26180	0.44	-1.4
5,852,837	+		PFLU_RS26180	0.44	-0.7
5,852,837	+		PFLU_RS26180	0.44	-0.3
5,852,837	+		PFLU_RS26180	0.44	-0.8
5,852,838	-		PFLU_RS26180	0.44	-0.6
5,852,838	-		PFLU_RS26180	0.44	-1.9
5,852,838	-		PFLU_RS26180	0.44	-0.1
5,853,041	+		PFLU_RS26180	0.56	+1.3
5,853,041	+		PFLU_RS26180	0.56	-0.5
5,853,041	+		PFLU_RS26180	0.56	-1.2
5,853,041	+		PFLU_RS26180	0.56	+0.1
5,853,041	+		PFLU_RS26180	0.56	+1.9
5,853,041	+		PFLU_RS26180	0.56	-1.3
5,853,041	+		PFLU_RS26180	0.56	+2.4
5,853,042	-		PFLU_RS26180	0.56	-0.8
5,853,042	-		PFLU_RS26180	0.56	-0.8
5,853,042	-		PFLU_RS26180	0.56	+2.1
5,853,054	-		PFLU_RS26180	0.57	+1.1
5,853,054	-		PFLU_RS26180	0.57	+0.1
5,853,204	+		PFLU_RS26180	0.66	-0.9
5,853,205	-		PFLU_RS26180	0.66	-1.2
5,853,449	+		PFLU_RS26180	0.81	+0.4
5,853,449	+		PFLU_RS26180	0.81	-0.8
5,853,449	+		PFLU_RS26180	0.81	+0.9
5,853,449	+		PFLU_RS26180	0.81	+0.3
5,853,514	+		PFLU_RS26180	0.85	-0.1
5,853,514	+		PFLU_RS26180	0.85	-0.5
5,853,514	+		PFLU_RS26180	0.85	+2.9
5,853,514	+		PFLU_RS26180	0.85	+1.0
5,853,515	-		PFLU_RS26180	0.85	+2.9
5,853,515	-		PFLU_RS26180	0.85	-1.7
5,853,515	-		PFLU_RS26180	0.85	-0.7
5,853,554	+		PFLU_RS26180	0.87	+2.3
5,853,555	-		PFLU_RS26180	0.87	-0.3
5,853,699	+				+0.3
5,853,761	+				+1.7
5,853,761	+				-1.6
5,853,761	+				+0.6
5,853,761	+				+0.4
5,853,761	+				-1.2
5,853,762	-				+0.3
5,853,762	-				+1.3
5,853,762	-				+0.6
5,853,762	-				-0.8
5,853,762	-				-0.4
5,853,762	-				+1.0
5,853,762	-				+0.9
5,853,762	-				+0.9
5,853,762	-				-1.3
5,853,762	-				-0.6
5,853,762	-				-2.0
5,853,762	-				+0.1
5,853,762	-				+1.1
5,853,805	+				+0.7
5,853,805	+				-1.5
5,853,805	+				+0.3
5,853,805	+				+1.3
5,853,805	+				-0.7
5,853,805	+				+1.5
5,853,805	+				+0.3
5,853,806	-				+1.1
5,853,806	-				+0.1
5,853,806	-				+0.1
5,853,806	-				-1.6
5,853,806	-				-1.9
5,853,806	-				+1.8
5,853,806	-				+0.9
5,853,806	-				-0.7
5,853,806	-				+0.5
5,853,809	+				+0.6
5,853,809	+				-2.4
5,853,809	+				-0.4
5,853,809	+				+1.0
5,853,809	+				+1.2
5,853,809	+				-1.1
5,853,809	+				+0.4
5,853,809	+				+1.3
5,853,809	+				-0.4
5,853,810	-				-1.0
5,853,810	-				+1.2
5,853,810	-				-1.3
5,853,825	+				+1.2
5,853,825	+				-0.2
5,853,825	+				+1.4
5,853,826	-				+1.4
5,853,826	-				+1.4
5,853,826	-				+1.0
5,853,826	-				-0.4
5,853,829	+				+0.3
5,853,829	+				+0.2
5,853,829	+				+2.1
5,853,829	+				+0.2
5,853,829	+				+0.8
5,853,829	+				-0.4
5,853,829	+				+1.4
5,853,829	+				+0.3
5,853,829	+				+2.3
5,853,829	+				-0.1
5,853,829	+				+0.1
5,853,829	+				-3.0
5,853,829	+				-1.2
5,853,829	+				+0.1
5,853,829	+				+0.6
5,853,829	+				+0.1
5,853,829	+				-0.0
5,853,829	+				+1.0
5,853,829	+				+1.0
5,853,829	+				+1.3
5,853,829	+				-2.3
5,853,829	+				+0.9
5,853,829	+				-1.6
5,853,829	+				+0.1
5,853,829	+				-0.6
5,853,829	+				-0.3
5,853,830	-				-0.9
5,853,830	-				+0.2
5,853,830	-				-0.7
5,853,830	-				+1.6
5,853,830	-				-2.0
5,853,830	-				-1.4
5,853,830	-				-1.1
5,853,830	-				-0.2
5,853,830	-				-0.9
5,853,830	-				-0.3
5,853,830	-				-1.8
5,853,830	-				-0.4
5,853,830	-				+2.7
5,853,830	-				+0.5
5,853,830	-				-1.5
5,853,830	-				+0.9
5,853,830	-				+1.1
5,853,830	-				-0.9
5,853,830	-				+1.7
5,853,830	-				-1.3
5,853,830	-				+0.2
5,853,830	-				-0.4
5,853,830	-				-0.7
5,853,830	-				-0.3
5,853,830	-				+0.5
5,853,830	-				-2.0
5,853,830	-				+0.2
5,853,830	-				+0.7
5,853,830	-				+1.0
5,853,830	-				-0.5
5,853,830	-				-0.0
5,853,830	-				-2.1
5,853,830	-				+0.3
5,853,856	+				+0.7
5,853,856	+				-0.1
5,853,856	+				+0.3
5,853,856	+				+0.7
5,853,856	+				+0.7
5,853,856	+				+0.4
5,853,856	+				+1.3
5,853,856	+				-0.9
5,853,856	+				+1.5
5,853,857	-				+0.5
5,853,857	-				-0.0
5,853,857	-				-0.6
5,853,857	-				+0.2
5,853,857	-				+2.1
5,853,857	-				+1.7
5,853,857	-				-0.0
5,853,857	-				-0.3
5,853,857	-				-0.3
5,853,857	-				-2.2
5,853,880	+				-1.0
5,853,880	+				+0.3
5,853,880	+				-0.9
5,853,881	-				-1.2
5,853,881	-				-1.9
5,853,881	-				+0.2
5,853,881	-				-1.7
5,853,881	-				+0.7
5,853,881	-				-2.2
5,853,887	+				-1.6
5,853,887	+				-0.5
5,853,887	+				-1.1
5,853,888	-				+0.1
5,853,888	-				+0.3
5,853,888	-				+0.9
5,853,888	-				-0.4
5,853,888	-				-0.2
5,853,888	-				-1.0
5,853,972	+				+1.1
5,853,999	+		PFLU_RS26185	0.10	+0.6
5,853,999	+		PFLU_RS26185	0.10	+1.1
5,854,000	-		PFLU_RS26185	0.11	+0.3
5,854,015	-		PFLU_RS26185	0.13	+0.4
5,854,015	-		PFLU_RS26185	0.13	+1.1
5,854,015	-		PFLU_RS26185	0.13	-1.7
5,854,067	+		PFLU_RS26185	0.22	+0.5
5,854,067	+		PFLU_RS26185	0.22	+1.3
5,854,067	+		PFLU_RS26185	0.22	+1.2
5,854,068	-		PFLU_RS26185	0.22	+0.4
5,854,068	-		PFLU_RS26185	0.22	+4.9
5,854,080	+		PFLU_RS26185	0.24	+0.1
5,854,080	+		PFLU_RS26185	0.24	-1.1
5,854,080	+		PFLU_RS26185	0.24	-1.6
5,854,081	-		PFLU_RS26185	0.24	-2.1
5,854,081	-		PFLU_RS26185	0.24	-0.3
5,854,094	+		PFLU_RS26185	0.26	+2.1
5,854,163	+		PFLU_RS26185	0.37	-0.7
5,854,163	+		PFLU_RS26185	0.37	-0.2
5,854,164	-		PFLU_RS26185	0.37	+2.2
5,854,164	-		PFLU_RS26185	0.37	+0.6
5,854,181	+		PFLU_RS26185	0.40	-1.4
5,854,182	-		PFLU_RS26185	0.40	-0.4
5,854,337	+		PFLU_RS26185	0.66	+0.1
5,854,337	+		PFLU_RS26185	0.66	-0.9
5,854,337	+		PFLU_RS26185	0.66	-0.9
5,854,337	+		PFLU_RS26185	0.66	-1.3
5,854,337	+		PFLU_RS26185	0.66	-2.4
5,854,337	+		PFLU_RS26185	0.66	+0.3
5,854,337	+		PFLU_RS26185	0.66	-0.3
5,854,337	+		PFLU_RS26185	0.66	-1.5
5,854,338	-		PFLU_RS26185	0.66	-0.8
5,854,338	-		PFLU_RS26185	0.66	-0.5
5,854,338	-		PFLU_RS26185	0.66	+1.2
5,854,338	-		PFLU_RS26185	0.66	+2.4
5,854,338	-		PFLU_RS26185	0.66	+0.5
5,854,374	+		PFLU_RS26185	0.72	+1.7
5,854,427	+		PFLU_RS26185	0.80	+1.6
5,854,544	+				-0.8
5,854,544	+				+1.3
5,854,544	+				-0.1
5,854,544	+				-1.6
5,854,544	+				+0.7
5,854,545	-				+2.9
5,854,616	+				+1.9
5,854,617	-				+2.9
5,854,617	-				-1.5
5,854,618	+				+0.2
5,854,618	+				+0.5
5,854,618	+				+1.5
5,854,618	+				-0.7
5,854,618	+				-0.3
5,854,618	+				+0.9
5,854,619	-				-1.2
5,854,619	-				-0.5
5,854,619	-				-0.1
5,854,619	-				-0.4
5,854,619	-				-1.2
5,854,619	-				-2.6
5,854,619	-				-0.3
5,854,704	+				-1.9
5,854,704	+				+0.1
5,854,704	+				+0.4