Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS23185

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
5,209,397	+		PFLU_RS23175	0.37	-0.1
5,209,398	-		PFLU_RS23175	0.37	+2.3
5,209,398	-		PFLU_RS23175	0.37	+1.8
5,209,599	-		PFLU_RS23175	0.82	+1.0
5,209,652	+				+0.9
5,209,652	+				+0.1
5,209,655	+				-0.9
5,209,656	-				-1.3
5,209,656	-				+0.5
5,209,681	+				+0.3
5,209,681	+				-0.4
5,209,681	+				-2.8
5,209,682	-				-0.3
5,209,682	-				+0.9
5,209,682	-				+0.9
5,209,682	-				+0.5
5,209,682	-				-0.7
5,209,724	+		PFLU_RS23180	0.11	+0.2
5,209,725	-		PFLU_RS23180	0.11	+1.2
5,209,769	-		PFLU_RS23180	0.22	+1.3
5,209,769	-		PFLU_RS23180	0.22	-0.2
5,209,834	+		PFLU_RS23180	0.38	-0.2
5,209,834	+		PFLU_RS23180	0.38	-0.1
5,209,835	-		PFLU_RS23180	0.38	-1.3
5,209,877	+		PFLU_RS23180	0.48	-0.9
5,209,877	+		PFLU_RS23180	0.48	+1.2
5,209,878	-		PFLU_RS23180	0.49	-1.0
5,209,878	-		PFLU_RS23180	0.49	+0.3
5,209,878	-		PFLU_RS23180	0.49	+0.0
5,209,878	-		PFLU_RS23180	0.49	+0.9
5,209,975	+		PFLU_RS23180	0.72	+1.2
5,209,975	+		PFLU_RS23180	0.72	+0.2
5,209,975	+		PFLU_RS23180	0.72	-0.1
5,209,975	+		PFLU_RS23180	0.72	+2.6
5,209,975	+		PFLU_RS23180	0.72	+0.1
5,209,975	+		PFLU_RS23180	0.72	+2.8
5,209,975	+		PFLU_RS23180	0.72	+0.3
5,209,975	+		PFLU_RS23180	0.72	+0.1
5,209,975	+		PFLU_RS23180	0.72	+0.4
5,209,976	-		PFLU_RS23180	0.73	-0.6
5,209,976	-		PFLU_RS23180	0.73	+0.7
5,209,976	-		PFLU_RS23180	0.73	-0.3
5,209,976	-		PFLU_RS23180	0.73	+1.2
5,209,976	-		PFLU_RS23180	0.73	+1.0
5,209,976	-		PFLU_RS23180	0.73	-0.5
5,209,976	-		PFLU_RS23180	0.73	-1.1
5,209,976	-		PFLU_RS23180	0.73	-0.7
5,209,976	-		PFLU_RS23180	0.73	+1.3
5,209,976	-		PFLU_RS23180	0.73	-0.1
5,210,100	+				+0.2
5,210,101	-				+0.4
5,210,101	-				-1.6
5,210,129	+				+1.0
5,210,132	-				-1.9
5,210,132	-				+0.2
5,210,165	-				-0.7
5,210,165	-				+1.0
5,210,166	+				+0.6
5,210,166	+				+0.6
5,210,166	+				+0.5
5,210,166	+				-0.4
5,210,166	+				+0.2
5,210,167	-				+2.2
5,210,329	+				-0.0
5,210,329	+				-2.2
5,210,329	+				+0.5
5,210,329	+				-0.6
5,210,329	+				+0.5
5,210,329	+				+1.2
5,210,329	+				+1.2
5,210,329	+				+0.6
5,210,329	+				-0.3
5,210,329	+				+1.9
5,210,329	+				-0.6
5,210,329	+				+0.6
5,210,329	+				-0.2
5,210,329	+				+0.1
5,210,329	+				-0.2
5,210,330	-				-0.3
5,210,330	-				+0.5
5,210,330	-				-0.3
5,210,330	-				-0.5
5,210,330	-				+0.5
5,210,330	-				-0.2
5,210,330	-				-1.0
5,210,330	-				+0.6
5,210,330	-				-0.6
5,210,330	-				+0.0
5,210,330	-				+0.7
5,210,333	+				+0.7
5,210,333	+				-0.1
5,210,333	+				-0.1
5,210,333	+				-0.4
5,210,333	+				+0.8
5,210,333	+				+0.9
5,210,333	+				+1.0
5,210,333	+				+1.3
5,210,333	+				+3.1
5,210,333	+				+1.0
5,210,333	+				+0.4
5,210,333	+				-0.4
5,210,333	+				-0.5
5,210,333	+				+0.8
5,210,333	+				+1.4
5,210,333	+				-0.4
5,210,333	+				-0.5
5,210,333	+				+0.0
5,210,333	+				-0.7
5,210,333	+				-2.4
5,210,333	+				-1.2
5,210,333	+				+0.9
5,210,333	+				+1.0
5,210,333	+				-2.0
5,210,333	+				+0.1
5,210,333	+				+0.0
5,210,333	+				+0.8
5,210,333	+				-0.3
5,210,333	+				-0.6
5,210,333	+				-2.3
5,210,333	+				+0.1
5,210,333	+				+0.3
5,210,333	+				+0.8
5,210,333	+				+1.0
5,210,333	+				-2.5
5,210,333	+				+0.7
5,210,333	+				-0.2
5,210,333	+				+0.4
5,210,333	+				-1.6
5,210,333	+				+0.9
5,210,333	+				-0.7
5,210,333	+				+0.3
5,210,333	+				-0.1
5,210,333	+				+0.7
5,210,333	+				+0.5
5,210,333	+				+0.0
5,210,333	+				+1.9
5,210,333	+				-1.7
5,210,333	+				-0.3
5,210,333	+				+0.6
5,210,333	+				-1.0
5,210,333	+				-0.3
5,210,333	+				+1.4
5,210,333	+				-2.1
5,210,333	+				-0.1
5,210,333	+				+1.4
5,210,333	+				-0.6
5,210,333	+				+0.6
5,210,333	+				-1.5
5,210,333	+				+0.4
5,210,333	+				+0.8
5,210,333	+				-1.3
5,210,333	+				-0.2
5,210,333	+				+0.9
5,210,333	+				+0.9
5,210,333	+				+1.5
5,210,333	+				+1.4
5,210,333	+				+0.7
5,210,333	+				-1.6
5,210,333	+				-0.9
5,210,333	+				-1.3
5,210,333	+				-1.6
5,210,333	+				+1.0
5,210,333	+				+0.3
5,210,333	+				-0.7
5,210,333	+				+1.5
5,210,333	+				-0.1
5,210,333	+				+0.2
5,210,333	+				-0.3
5,210,333	+				+1.5
5,210,333	+				+0.6
5,210,333	+				+0.8
5,210,334	-				+0.5
5,210,334	-				+0.8
5,210,334	-				-0.2
5,210,334	-				-0.6
5,210,334	-				-0.2
5,210,334	-				+1.4
5,210,334	-				-0.6
5,210,334	-				-1.5
5,210,334	-				+2.6
5,210,334	-				+0.1
5,210,334	-				+0.3
5,210,334	-				-0.4
5,210,334	-				-0.9
5,210,334	-				-2.1
5,210,334	-				-0.4
5,210,334	-				+0.6
5,210,334	-				-2.0
5,210,334	-				-0.1
5,210,334	-				-0.4
5,210,334	-				+0.0
5,210,334	-				+0.7
5,210,334	-				+0.1
5,210,334	-				-0.8
5,210,334	-				+0.3
5,210,334	-				+0.2
5,210,334	-				+0.7
5,210,334	-				+0.9
5,210,334	-				-0.3
5,210,334	-				+0.6
5,210,334	-				-0.6
5,210,334	-				-1.3
5,210,334	-				+0.2
5,210,334	-				+0.1
5,210,334	-				-1.2
5,210,334	-				+0.9
5,210,334	-				-0.1
5,210,334	-				+0.4
5,210,334	-				-1.0
5,210,334	-				+1.3
5,210,334	-				-1.8
5,210,334	-				+0.4
5,210,334	-				+1.0
5,210,334	-				+0.9
5,210,334	-				-1.6
5,210,334	-				-0.0
5,210,334	-				+0.5
5,210,334	-				-0.8
5,210,334	-				+1.5
5,210,334	-				+1.6
5,210,334	-				+2.3
5,210,334	-				+1.1
5,210,334	-				-0.0
5,210,334	-				-0.5
5,210,334	-				-1.1
5,210,334	-				-0.9
5,210,334	-				+1.9
5,210,334	-				-0.2
5,210,334	-				+0.2
5,210,334	-				+0.0
5,210,334	-				+1.2
5,210,334	-				+0.4
5,210,334	-				-0.0
5,210,334	-				-1.3
5,210,334	-				+0.7
5,210,334	-				-0.4
5,210,334	-				+0.4
5,210,334	-				+0.7
5,210,334	-				-1.2
5,210,334	-				-1.2
5,210,334	-				+0.2
5,210,334	-				-0.3
5,210,336	-				+0.3
5,210,336	-				-1.4
5,210,398	+				+0.2
5,210,398	+				+0.6
5,210,398	+				-0.5
5,210,398	+				-0.6
5,210,398	+				+0.4
5,210,399	-				-0.2
5,210,399	-				-0.4
5,210,399	-				-0.4
5,210,399	-				+1.0
5,210,410	+				-1.2
5,210,492	-		PFLU_RS23185	0.11	-1.8
5,210,557	+		PFLU_RS23185	0.19	-1.1
5,210,557	+		PFLU_RS23185	0.19	+0.6
5,210,557	+		PFLU_RS23185	0.19	-0.7
5,210,557	+		PFLU_RS23185	0.19	-0.6
5,210,557	+		PFLU_RS23185	0.19	+0.0
5,210,558	-		PFLU_RS23185	0.19	-2.5
5,210,558	-		PFLU_RS23185	0.19	-0.4
5,210,558	-		PFLU_RS23185	0.19	-0.6
5,210,558	-		PFLU_RS23185	0.19	+1.0
5,210,558	-		PFLU_RS23185	0.19	-2.3
5,210,558	-		PFLU_RS23185	0.19	-1.5
5,210,558	-		PFLU_RS23185	0.19	-1.6
5,210,558	-		PFLU_RS23185	0.19	-0.3
5,210,608	+		PFLU_RS23185	0.25	-2.2
5,210,608	+		PFLU_RS23185	0.25	-0.2
5,210,608	+		PFLU_RS23185	0.25	+1.0
5,210,609	-		PFLU_RS23185	0.26	-0.5
5,210,609	-		PFLU_RS23185	0.26	-1.2
5,210,609	-		PFLU_RS23185	0.26	+1.0
5,210,698	+		PFLU_RS23185	0.36	+1.9
5,210,698	+		PFLU_RS23185	0.36	-2.0
5,210,749	+		PFLU_RS23185	0.43	-0.1
5,210,750	-		PFLU_RS23185	0.43	-2.8
5,210,750	-		PFLU_RS23185	0.43	-1.3
5,210,820	+		PFLU_RS23185	0.51	-1.9
5,210,820	+		PFLU_RS23185	0.51	-1.6
5,210,939	+		PFLU_RS23185	0.65	-1.3
5,210,940	-		PFLU_RS23185	0.66	+1.6
5,210,940	-		PFLU_RS23185	0.66	-1.6
5,210,940	-		PFLU_RS23185	0.66	-0.2
5,210,980	+		PFLU_RS23185	0.70	-0.2
5,210,980	+		PFLU_RS23185	0.70	-2.3
5,210,980	+		PFLU_RS23185	0.70	+0.3
5,210,981	-		PFLU_RS23185	0.71	-1.3
5,210,981	-		PFLU_RS23185	0.71	-1.0
5,210,981	-		PFLU_RS23185	0.71	-2.9
5,211,072	+		PFLU_RS23185	0.82	-0.6
5,211,072	+		PFLU_RS23185	0.82	+0.5
5,211,073	-		PFLU_RS23185	0.82	-0.9
5,211,073	-		PFLU_RS23185	0.82	-0.2
5,211,139	+		PFLU_RS23185	0.90	-1.6
5,211,139	+		PFLU_RS23185	0.90	-1.6
5,211,139	+		PFLU_RS23185	0.90	-1.6
5,211,139	+		PFLU_RS23185	0.90	-0.9
5,211,139	+		PFLU_RS23185	0.90	+0.9
5,211,140	-		PFLU_RS23185	0.90	-1.2
5,211,140	-		PFLU_RS23185	0.90	-1.2
5,211,140	-		PFLU_RS23185	0.90	-1.8
5,211,140	-		PFLU_RS23185	0.90	-2.2
5,211,140	-		PFLU_RS23185	0.90	+0.6
5,211,140	-		PFLU_RS23185	0.90	-0.4
5,211,140	-		PFLU_RS23185	0.90	-1.4
5,211,140	-		PFLU_RS23185	0.90	-1.9
5,211,140	-		PFLU_RS23185	0.90	-1.7
5,211,140	-		PFLU_RS23185	0.90	-1.1
5,211,140	-		PFLU_RS23185	0.90	-2.4
5,211,140	-		PFLU_RS23185	0.90	-1.1
5,211,140	-		PFLU_RS23185	0.90	+0.5
5,211,140	-		PFLU_RS23185	0.90	-0.6
5,211,140	-		PFLU_RS23185	0.90	-1.2
5,211,162	+				+0.4
5,211,162	+				-2.2
5,211,162	+				-0.3
5,211,162	+				-1.0
5,211,163	-				+0.2
5,211,163	-				+1.6
5,211,213	-				-1.6
5,211,238	+				-0.5
5,211,239	-				-1.5
5,211,239	-				+1.7
5,211,245	+				-1.2
5,211,246	-				-3.0
5,211,246	-				-0.2
5,211,246	-				-0.0
5,211,246	-				+0.3
5,211,269	+				-1.0
5,211,269	+				-0.8
5,211,269	+				-0.4
5,211,270	-				-2.1
5,211,270	-				-1.0
5,211,382	+		PFLU_RS23190	0.12	+0.1
5,211,382	+		PFLU_RS23190	0.12	-0.8
5,211,383	-		PFLU_RS23190	0.12	+1.6
5,211,383	-		PFLU_RS23190	0.12	-0.1
5,211,383	-		PFLU_RS23190	0.12	-3.1
5,211,383	-		PFLU_RS23190	0.12	-0.7
5,211,383	-		PFLU_RS23190	0.12	-0.1
5,211,383	-		PFLU_RS23190	0.12	-1.4
5,211,383	-		PFLU_RS23190	0.12	+1.8
5,211,383	-		PFLU_RS23190	0.12	+1.1
5,211,383	-		PFLU_RS23190	0.12	+0.5
5,211,399	+		PFLU_RS23190	0.14	-0.8
5,211,399	+		PFLU_RS23190	0.14	-2.0
5,211,399	+		PFLU_RS23190	0.14	-1.8
5,211,399	+		PFLU_RS23190	0.14	-1.6
5,211,400	-		PFLU_RS23190	0.14	-1.1
5,211,400	-		PFLU_RS23190	0.14	+0.2
5,211,400	-		PFLU_RS23190	0.14	-0.2
5,211,400	-		PFLU_RS23190	0.14	-2.8
5,211,400	-		PFLU_RS23190	0.14	-0.4
5,211,400	-		PFLU_RS23190	0.14	-1.1
5,211,400	-		PFLU_RS23190	0.14	-1.3
5,211,400	-		PFLU_RS23190	0.14	-0.2
5,211,400	-		PFLU_RS23190	0.14	-0.3
5,211,400	-		PFLU_RS23190	0.14	+0.8
5,211,400	-		PFLU_RS23190	0.14	-1.1
5,211,400	-		PFLU_RS23190	0.14	-1.9
5,211,400	-		PFLU_RS23190	0.14	+1.6
5,211,411	+		PFLU_RS23190	0.15	+1.7
5,211,411	+		PFLU_RS23190	0.15	+0.1
5,211,411	+		PFLU_RS23190	0.15	+0.7
5,211,411	+		PFLU_RS23190	0.15	-1.4
5,211,442	+		PFLU_RS23190	0.19	-1.3
5,211,442	+		PFLU_RS23190	0.19	-1.6
5,211,442	+		PFLU_RS23190	0.19	+0.2
5,211,442	+		PFLU_RS23190	0.19	-2.0
5,211,442	+		PFLU_RS23190	0.19	+0.6
5,211,442	+		PFLU_RS23190	0.19	+1.2
5,211,442	+		PFLU_RS23190	0.19	+0.9
5,211,442	+		PFLU_RS23190	0.19	-1.1
5,211,442	+		PFLU_RS23190	0.19	+0.6
5,211,442	+		PFLU_RS23190	0.19	-0.1
5,211,443	-		PFLU_RS23190	0.19	+0.2
5,211,461	+		PFLU_RS23190	0.21	+0.1
5,211,461	+		PFLU_RS23190	0.21	-2.1
5,211,462	-		PFLU_RS23190	0.21	-0.9
5,211,543	+		PFLU_RS23190	0.29	-1.0
5,211,543	+		PFLU_RS23190	0.29	+0.3
5,211,544	-		PFLU_RS23190	0.30	-2.8
5,211,544	-		PFLU_RS23190	0.30	-1.6
5,211,544	-		PFLU_RS23190	0.30	+1.5
5,211,544	-		PFLU_RS23190	0.30	+0.9
5,211,544	-		PFLU_RS23190	0.30	+0.3
5,211,551	+		PFLU_RS23190	0.30	-1.3
5,211,551	+		PFLU_RS23190	0.30	+0.4
5,211,552	-		PFLU_RS23190	0.30	+1.7
5,211,659	-		PFLU_RS23190	0.42	+0.7
5,211,672	+		PFLU_RS23190	0.43	+1.2
5,211,672	+		PFLU_RS23190	0.43	-0.5
5,211,673	-		PFLU_RS23190	0.43	+2.7
5,211,673	-		PFLU_RS23190	0.43	-0.7
5,211,673	-		PFLU_RS23190	0.43	-1.0
5,211,673	-		PFLU_RS23190	0.43	+1.5
5,211,673	-		PFLU_RS23190	0.43	-2.1
5,211,673	-		PFLU_RS23190	0.43	-0.6
5,211,806	+		PFLU_RS23190	0.58	-0.3
5,211,806	+		PFLU_RS23190	0.58	-0.9
5,211,806	+		PFLU_RS23190	0.58	+0.3
5,211,807	-		PFLU_RS23190	0.58	+0.8
5,211,807	-		PFLU_RS23190	0.58	-0.6
5,211,807	-		PFLU_RS23190	0.58	+0.2
5,211,807	-		PFLU_RS23190	0.58	-1.6
5,211,911	+		PFLU_RS23190	0.69	-0.6
5,211,911	+		PFLU_RS23190	0.69	-2.2
5,211,911	+		PFLU_RS23190	0.69	-0.3
5,211,911	+		PFLU_RS23190	0.69	-0.6
5,211,911	+		PFLU_RS23190	0.69	-1.2
5,211,911	+		PFLU_RS23190	0.69	+1.1
5,211,912	-		PFLU_RS23190	0.69	-0.7
5,211,912	-		PFLU_RS23190	0.69	-2.0
5,211,912	-		PFLU_RS23190	0.69	-1.9
5,211,912	-		PFLU_RS23190	0.69	-0.2
5,211,912	-		PFLU_RS23190	0.69	+1.4
5,212,103	+		PFLU_RS23190	0.89	+0.7
5,212,103	+		PFLU_RS23190	0.89	+0.6
5,212,103	+		PFLU_RS23190	0.89	-0.5
5,212,103	+		PFLU_RS23190	0.89	-0.7
5,212,103	+		PFLU_RS23190	0.89	-2.1
5,212,103	+		PFLU_RS23190	0.89	+1.0
5,212,104	-		PFLU_RS23190	0.90	-1.9
5,212,104	-		PFLU_RS23190	0.90	-1.8
5,212,104	-		PFLU_RS23190	0.90	-1.1
5,212,104	-		PFLU_RS23190	0.90	+0.1
5,212,189	+				-1.8
5,212,189	+				+1.6
5,212,190	-				+0.4
5,212,190	-				+1.5
5,212,212	+				-0.4
5,212,212	+				-0.6
5,212,212	+				-2.1
5,212,217	+				+2.6
5,212,218	-				-1.3
5,212,218	-				+0.4
5,212,218	-				-1.0