Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22585

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
5,084,112	+		PFLU_RS22580	0.21	+1.5
5,084,112	+		PFLU_RS22580	0.21	-0.7
5,084,113	-		PFLU_RS22580	0.21	+0.1
5,084,159	+		PFLU_RS22580	0.25	+1.7
5,084,159	+		PFLU_RS22580	0.25	-0.1
5,084,160	-		PFLU_RS22580	0.25	+2.5
5,084,291	-		PFLU_RS22580	0.36	+1.3
5,084,291	-		PFLU_RS22580	0.36	-0.2
5,084,291	-		PFLU_RS22580	0.36	+0.1
5,084,459	+		PFLU_RS22580	0.50	-1.4
5,084,459	+		PFLU_RS22580	0.50	-0.8
5,084,459	+		PFLU_RS22580	0.50	+0.3
5,084,460	-		PFLU_RS22580	0.50	+0.1
5,084,508	-		PFLU_RS22580	0.54	-0.2
5,084,508	-		PFLU_RS22580	0.54	+1.5
5,084,559	-		PFLU_RS22580	0.58	-0.4
5,084,600	+		PFLU_RS22580	0.61	+1.7
5,084,601	-		PFLU_RS22580	0.61	+0.5
5,084,601	-		PFLU_RS22580	0.61	-0.1
5,084,603	+		PFLU_RS22580	0.62	+0.3
5,084,603	+		PFLU_RS22580	0.62	+0.1
5,084,603	+		PFLU_RS22580	0.62	-1.5
5,084,603	+		PFLU_RS22580	0.62	+0.5
5,084,603	+		PFLU_RS22580	0.62	-0.4
5,084,603	+		PFLU_RS22580	0.62	+1.3
5,084,603	+		PFLU_RS22580	0.62	-0.4
5,084,603	+		PFLU_RS22580	0.62	+3.5
5,084,604	-		PFLU_RS22580	0.62	+1.8
5,084,604	-		PFLU_RS22580	0.62	+0.4
5,084,604	-		PFLU_RS22580	0.62	+0.9
5,084,699	+		PFLU_RS22580	0.70	-2.3
5,084,699	+		PFLU_RS22580	0.70	-1.7
5,084,699	+		PFLU_RS22580	0.70	-0.1
5,084,699	+		PFLU_RS22580	0.70	+0.9
5,084,699	+		PFLU_RS22580	0.70	-1.2
5,084,699	+		PFLU_RS22580	0.70	+0.3
5,084,699	+		PFLU_RS22580	0.70	+1.1
5,084,699	+		PFLU_RS22580	0.70	+0.3
5,084,699	+		PFLU_RS22580	0.70	-1.8
5,084,699	+		PFLU_RS22580	0.70	+1.0
5,084,699	+		PFLU_RS22580	0.70	+1.4
5,084,699	+		PFLU_RS22580	0.70	+1.7
5,084,699	+		PFLU_RS22580	0.70	+0.2
5,084,699	+		PFLU_RS22580	0.70	-1.5
5,084,699	+		PFLU_RS22580	0.70	+0.4
5,084,699	+		PFLU_RS22580	0.70	+0.9
5,084,699	+		PFLU_RS22580	0.70	-2.1
5,084,700	-		PFLU_RS22580	0.70	-1.0
5,084,700	-		PFLU_RS22580	0.70	+2.1
5,084,700	-		PFLU_RS22580	0.70	-1.5
5,084,700	-		PFLU_RS22580	0.70	+0.0
5,084,700	-		PFLU_RS22580	0.70	+1.2
5,084,700	-		PFLU_RS22580	0.70	-0.5
5,084,700	-		PFLU_RS22580	0.70	+0.3
5,084,700	-		PFLU_RS22580	0.70	-1.2
5,084,700	-		PFLU_RS22580	0.70	+1.6
5,084,700	-		PFLU_RS22580	0.70	-0.1
5,084,706	+		PFLU_RS22580	0.70	+0.5
5,084,803	+		PFLU_RS22580	0.78	+1.3
5,084,804	-		PFLU_RS22580	0.78	+0.3
5,084,804	-		PFLU_RS22580	0.78	+0.5
5,084,804	-		PFLU_RS22580	0.78	+2.0
5,084,945	+		PFLU_RS22580	0.90	-1.3
5,084,946	-				-1.8
5,084,946	-				+1.4
5,085,178	+				-2.2
5,085,178	+				+1.0
5,085,178	+				-0.2
5,085,178	+				+0.5
5,085,178	+				-1.7
5,085,179	-				+0.9
5,085,179	-				+0.6
5,085,203	+				-1.0
5,085,204	-				-1.8
5,085,265	+		PFLU_RS22585	0.12	-0.8
5,085,265	+		PFLU_RS22585	0.12	-0.3
5,085,266	-		PFLU_RS22585	0.12	-1.4
5,085,268	+		PFLU_RS22585	0.12	+0.5
5,085,268	+		PFLU_RS22585	0.12	+0.4
5,085,600	+		PFLU_RS22585	0.32	-1.0
5,085,601	-		PFLU_RS22585	0.32	+2.2
5,085,794	+		PFLU_RS22585	0.44	+1.0
5,085,794	+		PFLU_RS22585	0.44	-0.6
5,085,794	+		PFLU_RS22585	0.44	-0.7
5,085,794	+		PFLU_RS22585	0.44	-0.9
5,085,794	+		PFLU_RS22585	0.44	+0.1
5,085,795	-		PFLU_RS22585	0.44	+1.9
5,085,854	+		PFLU_RS22585	0.47	+1.5
5,085,854	+		PFLU_RS22585	0.47	+1.0
5,085,855	-		PFLU_RS22585	0.47	-0.6
5,086,063	+		PFLU_RS22585	0.60	-0.6
5,086,063	+		PFLU_RS22585	0.60	-0.2
5,086,063	+		PFLU_RS22585	0.60	-0.0
5,086,063	+		PFLU_RS22585	0.60	+1.0
5,086,063	+		PFLU_RS22585	0.60	-0.9
5,086,064	-		PFLU_RS22585	0.60	-0.9
5,086,064	-		PFLU_RS22585	0.60	+0.7
5,086,064	-		PFLU_RS22585	0.60	+0.7
5,086,066	+		PFLU_RS22585	0.60	-0.5
5,086,066	+		PFLU_RS22585	0.60	+1.7
5,086,066	+		PFLU_RS22585	0.60	-1.2
5,086,066	+		PFLU_RS22585	0.60	+0.8
5,086,066	+		PFLU_RS22585	0.60	-0.6
5,086,066	+		PFLU_RS22585	0.60	-0.4
5,086,066	+		PFLU_RS22585	0.60	-0.3
5,086,066	+		PFLU_RS22585	0.60	+0.7
5,086,067	-		PFLU_RS22585	0.60	+0.3
5,086,067	-		PFLU_RS22585	0.60	-1.7
5,086,067	-		PFLU_RS22585	0.60	-1.0
5,086,067	-		PFLU_RS22585	0.60	+0.0
5,086,067	-		PFLU_RS22585	0.60	+1.0
5,086,067	-		PFLU_RS22585	0.60	+0.5
5,086,067	-		PFLU_RS22585	0.60	-1.1
5,086,067	-		PFLU_RS22585	0.60	-1.5
5,086,067	-		PFLU_RS22585	0.60	+0.1
5,086,067	-		PFLU_RS22585	0.60	+1.1
5,086,082	-		PFLU_RS22585	0.61	-0.3
5,086,122	+		PFLU_RS22585	0.63	-0.7
5,086,122	+		PFLU_RS22585	0.63	-0.5
5,086,122	+		PFLU_RS22585	0.63	+0.3
5,086,122	+		PFLU_RS22585	0.63	-0.3
5,086,123	-		PFLU_RS22585	0.63	+1.5
5,086,123	-		PFLU_RS22585	0.63	-0.5
5,086,123	-		PFLU_RS22585	0.63	-0.9
5,086,123	-		PFLU_RS22585	0.63	-0.6
5,086,123	-		PFLU_RS22585	0.63	-0.6
5,086,123	-		PFLU_RS22585	0.63	+0.4
5,086,123	-		PFLU_RS22585	0.63	-0.8
5,086,123	-		PFLU_RS22585	0.63	-0.3
5,086,123	-		PFLU_RS22585	0.63	+0.2
5,086,280	-		PFLU_RS22585	0.73	-1.3
5,086,313	+		PFLU_RS22585	0.75	-0.4
5,086,313	+		PFLU_RS22585	0.75	-0.6
5,086,313	+		PFLU_RS22585	0.75	+0.1
5,086,313	+		PFLU_RS22585	0.75	-0.0
5,086,313	+		PFLU_RS22585	0.75	-1.5
5,086,313	+		PFLU_RS22585	0.75	-1.0
5,086,313	+		PFLU_RS22585	0.75	+2.3
5,086,313	+		PFLU_RS22585	0.75	-0.4
5,086,314	-		PFLU_RS22585	0.75	-0.3
5,086,314	-		PFLU_RS22585	0.75	-0.7
5,086,314	-		PFLU_RS22585	0.75	+1.0
5,086,314	-		PFLU_RS22585	0.75	-0.3
5,086,323	+		PFLU_RS22585	0.75	+0.8
5,086,385	+		PFLU_RS22585	0.79	+1.1
5,086,385	+		PFLU_RS22585	0.79	-0.7
5,086,385	+		PFLU_RS22585	0.79	+2.1
5,086,385	+		PFLU_RS22585	0.79	+0.9
5,086,385	+		PFLU_RS22585	0.79	+0.1
5,086,385	+		PFLU_RS22585	0.79	-2.3
5,086,385	+		PFLU_RS22585	0.79	+0.5
5,086,385	+		PFLU_RS22585	0.79	-0.4
5,086,385	+		PFLU_RS22585	0.79	+1.2
5,086,385	+		PFLU_RS22585	0.79	-0.5
5,086,385	+		PFLU_RS22585	0.79	-0.6
5,086,386	-		PFLU_RS22585	0.79	+0.9
5,086,386	-		PFLU_RS22585	0.79	-0.2
5,086,386	-		PFLU_RS22585	0.79	+0.1
5,086,386	-		PFLU_RS22585	0.79	-0.0
5,086,386	-		PFLU_RS22585	0.79	-2.1
5,086,386	-		PFLU_RS22585	0.79	-0.8
5,086,386	-		PFLU_RS22585	0.79	+0.5
5,086,386	-		PFLU_RS22585	0.79	-0.3
5,086,386	-		PFLU_RS22585	0.79	-2.2
5,086,386	-		PFLU_RS22585	0.79	+0.7
5,086,386	-		PFLU_RS22585	0.79	+1.0
5,086,387	+		PFLU_RS22585	0.79	+1.2
5,086,387	+		PFLU_RS22585	0.79	-0.8
5,086,387	+		PFLU_RS22585	0.79	-0.0
5,086,387	+		PFLU_RS22585	0.79	-0.5
5,086,388	-		PFLU_RS22585	0.79	+0.3
5,086,388	-		PFLU_RS22585	0.79	+0.6
5,086,388	-		PFLU_RS22585	0.79	+1.5
5,086,388	-		PFLU_RS22585	0.79	+0.5
5,086,388	-		PFLU_RS22585	0.79	-0.2
5,086,388	-		PFLU_RS22585	0.79	+3.4
5,086,388	-		PFLU_RS22585	0.79	-0.5
5,086,389	+		PFLU_RS22585	0.79	-1.0
5,086,389	+		PFLU_RS22585	0.79	+1.2
5,086,389	+		PFLU_RS22585	0.79	-2.7
5,086,389	+		PFLU_RS22585	0.79	+3.0
5,086,390	-		PFLU_RS22585	0.79	-0.0
5,086,390	-		PFLU_RS22585	0.79	+1.2
5,086,390	-		PFLU_RS22585	0.79	+0.7
5,086,390	-		PFLU_RS22585	0.79	+0.7
5,086,390	-		PFLU_RS22585	0.79	-1.2
5,086,408	+		PFLU_RS22585	0.80	-0.7
5,086,408	+		PFLU_RS22585	0.80	-0.6
5,086,408	+		PFLU_RS22585	0.80	-0.2
5,086,408	+		PFLU_RS22585	0.80	+0.8
5,086,408	+		PFLU_RS22585	0.80	-1.3
5,086,408	+		PFLU_RS22585	0.80	-0.6
5,086,408	+		PFLU_RS22585	0.80	-0.3
5,086,408	+		PFLU_RS22585	0.80	-0.5
5,086,409	-		PFLU_RS22585	0.80	+0.6
5,086,409	-		PFLU_RS22585	0.80	+0.9
5,086,411	+		PFLU_RS22585	0.80	-1.9
5,086,411	+		PFLU_RS22585	0.80	-0.0
5,086,411	+		PFLU_RS22585	0.80	+1.5
5,086,412	-		PFLU_RS22585	0.80	-0.2
5,086,412	-		PFLU_RS22585	0.80	+0.8
5,086,412	-		PFLU_RS22585	0.80	+1.5
5,086,412	-		PFLU_RS22585	0.80	+0.6
5,086,412	-		PFLU_RS22585	0.80	+0.5
5,086,429	+		PFLU_RS22585	0.82	-0.5
5,086,567	+		PFLU_RS22585	0.90	-0.3
5,086,567	+		PFLU_RS22585	0.90	-0.5
5,086,568	-		PFLU_RS22585	0.90	-0.8
5,086,717	+				+0.9
5,086,717	+				-2.4
5,086,717	+				-1.2
5,086,717	+				+0.5
5,086,717	+				+0.8
5,086,718	-				+1.0
5,086,718	-				-1.4
5,086,718	-				+1.4
5,086,718	-				+0.2
5,086,718	-				-1.6
5,086,747	+				+0.1
5,086,748	-				+0.4
5,086,748	-				+0.5
5,086,748	-				+0.4
5,086,748	-				+0.3
5,086,748	-				+0.8
5,086,786	+				-1.6
5,086,787	-				+0.5
5,086,964	+		PFLU_RS22590	0.27	-1.4
5,086,965	-		PFLU_RS22590	0.27	-0.4
5,086,965	-		PFLU_RS22590	0.27	-0.6
5,086,965	-		PFLU_RS22590	0.27	-2.5
5,086,986	+		PFLU_RS22590	0.30	-0.5
5,086,987	-		PFLU_RS22590	0.30	+0.7
5,087,111	+		PFLU_RS22590	0.47	-0.3
5,087,262	+		PFLU_RS22590	0.67	+0.1
5,087,262	+		PFLU_RS22590	0.67	-1.0
5,087,262	+		PFLU_RS22590	0.67	+1.0
5,087,262	+		PFLU_RS22590	0.67	-0.4
5,087,262	+		PFLU_RS22590	0.67	+0.8
5,087,262	+		PFLU_RS22590	0.67	-1.4
5,087,262	+		PFLU_RS22590	0.67	-0.7
5,087,262	+		PFLU_RS22590	0.67	-1.0
5,087,262	+		PFLU_RS22590	0.67	-2.8
5,087,262	+		PFLU_RS22590	0.67	+1.5
5,087,262	+		PFLU_RS22590	0.67	-1.4
5,087,262	+		PFLU_RS22590	0.67	+0.7
5,087,262	+		PFLU_RS22590	0.67	-1.0
5,087,263	-		PFLU_RS22590	0.67	-1.5
5,087,263	-		PFLU_RS22590	0.67	-0.1
5,087,263	-		PFLU_RS22590	0.67	+1.5
5,087,263	-		PFLU_RS22590	0.67	+0.5
5,087,263	-		PFLU_RS22590	0.67	-0.9
5,087,263	-		PFLU_RS22590	0.67	-0.4
5,087,263	-		PFLU_RS22590	0.67	+0.4
5,087,263	-		PFLU_RS22590	0.67	-1.3
5,087,263	-		PFLU_RS22590	0.67	-2.1
5,087,263	-		PFLU_RS22590	0.67	-0.9
5,087,263	-		PFLU_RS22590	0.67	+0.5
5,087,263	-		PFLU_RS22590	0.67	-1.4
5,087,272	+		PFLU_RS22590	0.68	-0.4
5,087,328	-		PFLU_RS22590	0.76	-0.8
5,087,400	+		PFLU_RS22590	0.85	+0.2
5,087,400	+		PFLU_RS22590	0.85	-0.8
5,087,400	+		PFLU_RS22590	0.85	-1.3
5,087,400	+		PFLU_RS22590	0.85	-0.0
5,087,400	+		PFLU_RS22590	0.85	-1.3
5,087,400	+		PFLU_RS22590	0.85	+0.3
5,087,401	-		PFLU_RS22590	0.86	-0.3
5,087,401	-		PFLU_RS22590	0.86	-0.9
5,087,401	-		PFLU_RS22590	0.86	+1.5
5,087,401	-		PFLU_RS22590	0.86	+0.7
5,087,401	-		PFLU_RS22590	0.86	+0.3
5,087,401	-		PFLU_RS22590	0.86	-1.5
5,087,401	-		PFLU_RS22590	0.86	+2.3
5,087,401	-		PFLU_RS22590	0.86	+0.1
5,087,401	-		PFLU_RS22590	0.86	+0.5
5,087,481	+				-0.1
5,087,482	-				-0.8
5,087,482	-				+1.5
5,087,555	+				-0.3
5,087,565	+				-0.3
5,087,565	+				-2.0
5,087,565	+				-0.9
5,087,565	+				+1.1
5,087,566	-				+1.1
5,087,566	-				+0.2
5,087,566	-				+0.4
5,087,566	-				-0.8
5,087,569	+				-0.0
5,087,569	+				-0.8
5,087,569	+				+0.5
5,087,569	+				-0.6
5,087,570	-				-1.5
5,087,570	-				-0.2
5,087,598	+				+0.2
5,087,598	+				-0.8
5,087,668	-		PFLU_RS22595	0.10	-0.3
5,087,668	-		PFLU_RS22595	0.10	+0.2
5,087,718	-		PFLU_RS22595	0.15	-0.0