Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21405

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
4,811,065	+		PFLU_RS21395	0.76	-0.7
4,811,066	-		PFLU_RS21395	0.76	-0.1
4,811,299	+				-0.5
4,811,300	-				-0.8
4,811,316	-				-2.4
4,811,316	-				+1.2
4,811,444	+				+0.4
4,811,444	+				-0.8
4,811,796	+		PFLU_RS21400	0.61	+0.0
4,811,797	-		PFLU_RS21400	0.61	+0.8
4,811,842	+		PFLU_RS21400	0.70	+0.7
4,811,842	+		PFLU_RS21400	0.70	+0.4
4,811,842	+		PFLU_RS21400	0.70	-0.3
4,811,842	+		PFLU_RS21400	0.70	-0.2
4,811,842	+		PFLU_RS21400	0.70	-0.2
4,811,842	+		PFLU_RS21400	0.70	-0.9
4,811,842	+		PFLU_RS21400	0.70	-1.2
4,811,842	+		PFLU_RS21400	0.70	-0.7
4,811,842	+		PFLU_RS21400	0.70	+0.1
4,811,842	+		PFLU_RS21400	0.70	-0.6
4,811,842	+		PFLU_RS21400	0.70	-0.5
4,811,843	-		PFLU_RS21400	0.70	+0.1
4,811,843	-		PFLU_RS21400	0.70	-1.8
4,811,843	-		PFLU_RS21400	0.70	-0.2
4,811,843	-		PFLU_RS21400	0.70	-1.9
4,811,843	-		PFLU_RS21400	0.70	-0.7
4,811,846	+		PFLU_RS21400	0.71	-1.5
4,811,846	+		PFLU_RS21400	0.71	-1.4
4,811,846	+		PFLU_RS21400	0.71	-0.7
4,811,847	-		PFLU_RS21400	0.71	-1.2
4,811,847	-		PFLU_RS21400	0.71	-0.2
4,811,847	-		PFLU_RS21400	0.71	+0.7
4,811,847	-		PFLU_RS21400	0.71	+0.4
4,811,847	-		PFLU_RS21400	0.71	+0.3
4,811,847	-		PFLU_RS21400	0.71	-0.1
4,811,847	-		PFLU_RS21400	0.71	-1.2
4,811,933	-		PFLU_RS21400	0.88	-0.5
4,812,036	+				+1.0
4,812,037	-				+1.5
4,812,037	-				+1.4
4,812,131	+				-0.3
4,812,131	+				-1.4
4,812,131	+				+0.3
4,812,131	+				-0.6
4,812,132	-				+0.3
4,812,132	-				+0.0
4,812,132	-				+0.3
4,812,157	+				+1.5
4,812,157	+				+1.3
4,812,221	+		PFLU_RS21405	0.14	-1.1
4,812,221	+		PFLU_RS21405	0.14	-1.3
4,812,222	-		PFLU_RS21405	0.14	-1.0
4,812,222	-		PFLU_RS21405	0.14	-0.0
4,812,222	-		PFLU_RS21405	0.14	-0.9
4,812,222	-		PFLU_RS21405	0.14	-0.9
4,812,222	-		PFLU_RS21405	0.14	-0.4
4,812,293	+		PFLU_RS21405	0.19	+1.0
4,812,293	+		PFLU_RS21405	0.19	-0.5
4,812,293	+		PFLU_RS21405	0.19	-0.1
4,812,293	+		PFLU_RS21405	0.19	+0.4
4,812,293	+		PFLU_RS21405	0.19	-0.2
4,812,293	+		PFLU_RS21405	0.19	+0.3
4,812,293	+		PFLU_RS21405	0.19	-2.1
4,812,293	+		PFLU_RS21405	0.19	+1.4
4,812,338	+		PFLU_RS21405	0.23	-1.9
4,812,338	+		PFLU_RS21405	0.23	-0.2
4,812,356	+		PFLU_RS21405	0.24	+0.9
4,812,356	+		PFLU_RS21405	0.24	-1.5
4,812,356	+		PFLU_RS21405	0.24	+1.1
4,812,356	+		PFLU_RS21405	0.24	+0.1
4,812,357	-		PFLU_RS21405	0.24	-2.5
4,812,357	-		PFLU_RS21405	0.24	+1.0
4,812,357	-		PFLU_RS21405	0.24	-2.4
4,812,399	+		PFLU_RS21405	0.27	-0.8
4,812,399	+		PFLU_RS21405	0.27	-0.1
4,812,440	+		PFLU_RS21405	0.30	-1.2
4,812,440	+		PFLU_RS21405	0.30	+0.4
4,812,441	-		PFLU_RS21405	0.30	-0.9
4,812,561	-		PFLU_RS21405	0.40	-1.7
4,812,719	+		PFLU_RS21405	0.52	+1.0
4,812,719	+		PFLU_RS21405	0.52	-1.3
4,812,719	+		PFLU_RS21405	0.52	-0.8
4,812,719	+		PFLU_RS21405	0.52	+0.2
4,812,719	+		PFLU_RS21405	0.52	+0.0
4,812,719	+		PFLU_RS21405	0.52	-0.2
4,812,719	+		PFLU_RS21405	0.52	-0.9
4,812,719	+		PFLU_RS21405	0.52	+1.1
4,812,719	+		PFLU_RS21405	0.52	-1.5
4,812,719	+		PFLU_RS21405	0.52	+0.5
4,812,719	+		PFLU_RS21405	0.52	+1.3
4,812,719	+		PFLU_RS21405	0.52	-0.3
4,812,719	+		PFLU_RS21405	0.52	-1.7
4,812,719	+		PFLU_RS21405	0.52	-0.1
4,812,720	-		PFLU_RS21405	0.52	+1.7
4,812,720	-		PFLU_RS21405	0.52	+1.2
4,812,720	-		PFLU_RS21405	0.52	-1.2
4,812,720	-		PFLU_RS21405	0.52	-1.2
4,812,720	-		PFLU_RS21405	0.52	+0.8
4,812,720	-		PFLU_RS21405	0.52	-2.2
4,812,720	-		PFLU_RS21405	0.52	-0.0
4,812,720	-		PFLU_RS21405	0.52	-0.2
4,812,720	-		PFLU_RS21405	0.52	-2.0
4,812,773	+		PFLU_RS21405	0.56	+0.0
4,812,773	+		PFLU_RS21405	0.56	+0.1
4,812,773	+		PFLU_RS21405	0.56	+0.3
4,812,774	-		PFLU_RS21405	0.56	-2.0
4,812,785	+		PFLU_RS21405	0.57	-1.2
4,812,785	+		PFLU_RS21405	0.57	+1.2
4,812,786	-		PFLU_RS21405	0.57	-1.0
4,812,839	+		PFLU_RS21405	0.61	+1.5
4,812,839	+		PFLU_RS21405	0.61	-0.4
4,812,869	+		PFLU_RS21405	0.63	-2.2
4,812,869	+		PFLU_RS21405	0.63	-0.6
4,812,869	+		PFLU_RS21405	0.63	+0.4
4,812,870	-		PFLU_RS21405	0.63	+0.8
4,812,917	+		PFLU_RS21405	0.67	+1.1
4,812,918	-		PFLU_RS21405	0.67	-1.5
4,812,918	-		PFLU_RS21405	0.67	-0.3
4,812,918	-		PFLU_RS21405	0.67	-0.2
4,812,932	-		PFLU_RS21405	0.68	+1.2
4,813,134	+		PFLU_RS21405	0.84	+0.6
4,813,486	+				-0.2
4,813,487	-				+0.2
4,813,521	+				-0.0
4,813,521	+				-0.9
4,813,521	+				-1.9
4,813,522	-				-0.7
4,813,522	-				+0.5
4,813,522	-				-1.7
4,813,553	-				+1.4
4,813,619	-				-0.2
4,813,644	+				+0.7
4,813,644	+				-2.4
4,813,644	+				+1.0
4,813,644	+				-0.4
4,813,644	+				-0.8
4,813,645	-				+1.1
4,813,673	+				+1.3
4,813,945	+		PFLU_RS21410	0.30	+0.6
4,813,945	+		PFLU_RS21410	0.30	+1.0
4,814,067	+		PFLU_RS21410	0.39	-0.2
4,814,067	+		PFLU_RS21410	0.39	+1.3
4,814,067	+		PFLU_RS21410	0.39	-1.8
4,814,067	+		PFLU_RS21410	0.39	-0.9
4,814,067	+		PFLU_RS21410	0.39	+1.4
4,814,068	-		PFLU_RS21410	0.39	+0.3
4,814,141	+		PFLU_RS21410	0.44	-1.2
4,814,141	+		PFLU_RS21410	0.44	+1.7
4,814,142	-		PFLU_RS21410	0.45	+1.1
4,814,142	-		PFLU_RS21410	0.45	-1.9
4,814,142	-		PFLU_RS21410	0.45	-0.6
4,814,311	+		PFLU_RS21410	0.57	+0.4