Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10785

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
2,375,103	+				+0.9
2,375,125	+				+0.7
2,375,126	-				-2.8
2,375,140	-				-0.5
2,375,146	+				-0.3
2,375,147	-				+0.8
2,375,782	+				-0.6
2,375,782	+				-0.4
2,375,782	+				+0.1
2,375,782	+				+2.1
2,375,783	-				-1.1
2,375,783	-				+0.7
2,375,783	-				-2.6
2,376,004	+				+0.1
2,376,004	+				+0.8
2,376,004	+				-0.8
2,376,004	+				+2.2
2,376,004	+				+0.6
2,376,004	+				+0.1
2,376,004	+				-1.6
2,376,004	+				+0.9
2,376,004	+				+2.8
2,376,004	+				-0.5
2,376,004	+				-0.7
2,376,004	+				+0.5
2,376,004	+				+1.2
2,376,004	+				+0.4
2,376,004	+				+1.2
2,376,004	+				+1.3
2,376,005	-				+2.8
2,376,005	-				-0.6
2,376,005	-				+2.7
2,376,005	-				+0.3
2,376,005	-				-1.1
2,376,008	+				+0.7
2,376,008	+				-0.1
2,376,036	-				-1.3
2,376,040	+				-0.2
2,376,040	+				-0.3
2,376,040	+				+0.2
2,376,040	+				-0.8
2,376,041	-				+0.9
2,376,041	-				-0.5
2,376,041	-				+0.3
2,376,041	-				+0.7
2,376,041	-				-0.0
2,376,140	+		PFLU_RS10785	0.11	+0.1
2,376,140	+		PFLU_RS10785	0.11	+2.2
2,376,140	+		PFLU_RS10785	0.11	+1.4
2,376,141	-		PFLU_RS10785	0.12	+0.7
2,376,141	-		PFLU_RS10785	0.12	+0.8
2,376,146	+		PFLU_RS10785	0.13	+0.3
2,376,153	+		PFLU_RS10785	0.15	+0.3
2,376,178	+		PFLU_RS10785	0.23	-0.1
2,376,178	+		PFLU_RS10785	0.23	+0.5
2,376,179	-		PFLU_RS10785	0.23	+0.4
2,376,225	+		PFLU_RS10785	0.37	+2.2
2,376,225	+		PFLU_RS10785	0.37	+1.1
2,376,228	+		PFLU_RS10785	0.38	+0.4
2,376,228	+		PFLU_RS10785	0.38	+0.9
2,376,228	+		PFLU_RS10785	0.38	-1.1
2,376,228	+		PFLU_RS10785	0.38	-1.7
2,376,229	-		PFLU_RS10785	0.38	-0.1
2,376,322	+		PFLU_RS10785	0.66	+0.5
2,376,322	+		PFLU_RS10785	0.66	-0.5
2,376,323	-		PFLU_RS10785	0.66	+0.4
2,376,323	-		PFLU_RS10785	0.66	+1.2
2,376,323	-		PFLU_RS10785	0.66	+0.3
2,376,323	-		PFLU_RS10785	0.66	-0.2
2,376,336	-		PFLU_RS10785	0.70	+0.5
2,376,388	+		PFLU_RS10785	0.86	-0.4
2,376,388	+		PFLU_RS10785	0.86	+1.9
2,376,404	+				-0.5
2,376,429	+				-1.2
2,376,467	+				-0.8
2,376,482	+		PFLU_RS30655	0.11	+0.6
2,376,482	+		PFLU_RS30655	0.11	-1.4
2,376,482	+		PFLU_RS30655	0.11	+0.8
2,376,482	+		PFLU_RS30655	0.11	+0.8
2,376,482	+		PFLU_RS30655	0.11	-0.7
2,376,482	+		PFLU_RS30655	0.11	+0.4
2,376,483	-		PFLU_RS30655	0.12	+1.0
2,376,483	-		PFLU_RS30655	0.12	+0.2
2,376,483	-		PFLU_RS30655	0.12	-2.3
2,376,510	-		PFLU_RS30655	0.17	-1.6
2,376,526	+		PFLU_RS30655	0.21	+0.4
2,376,526	+		PFLU_RS30655	0.21	+1.2
2,376,526	+		PFLU_RS30655	0.21	-2.5
2,376,526	+		PFLU_RS30655	0.21	+0.8
2,376,526	+		PFLU_RS30655	0.21	+0.1
2,376,526	+		PFLU_RS30655	0.21	-0.0
2,376,527	-		PFLU_RS30655	0.21	+2.0
2,376,527	-		PFLU_RS30655	0.21	-1.5
2,376,551	+		PFLU_RS30655	0.26	+0.6
2,376,552	-		PFLU_RS30655	0.26	+0.7
2,376,552	-		PFLU_RS30655	0.26	-2.2
2,376,620	+		PFLU_RS30655	0.41	-1.2
2,376,620	+		PFLU_RS30655	0.41	-0.8
2,376,621	-		PFLU_RS30655	0.41	-0.8
2,376,760	+		PFLU_RS30655	0.70	+1.1
2,376,761	-		PFLU_RS30655	0.71	+0.7
2,376,761	-		PFLU_RS30655	0.71	+0.8
2,376,762	+		PFLU_RS30655	0.71	+2.5
2,376,762	+		PFLU_RS30655	0.71	+1.7
2,376,763	-		PFLU_RS30655	0.71	-2.5
2,376,763	-		PFLU_RS30655	0.71	+1.6
2,376,791	+		PFLU_RS30655	0.77	+0.2
2,376,797	+		PFLU_RS30655	0.78	-1.1
2,376,798	-		PFLU_RS30655	0.79	-0.2
2,376,798	-		PFLU_RS30655	0.79	-0.6
2,376,806	+		PFLU_RS30655	0.80	-0.8
2,376,807	-		PFLU_RS30655	0.80	-0.2
2,376,807	-		PFLU_RS30655	0.80	+0.8
2,376,807	-		PFLU_RS30655	0.80	-1.5
2,376,833	+		PFLU_RS30655	0.86	+1.2
2,376,834	-		PFLU_RS30655	0.86	-1.9
2,376,840	-		PFLU_RS30655	0.87	+0.7
2,376,840	-		PFLU_RS30655	0.87	-0.0
2,376,892	+				+0.5
2,376,898	+				+0.8
2,376,898	+				+1.1
2,376,898	+				+0.2
2,376,898	+				+1.0
2,376,898	+				-0.1
2,376,899	-				+0.0
2,376,899	-				+0.4
2,376,906	+				+2.0
2,376,906	+				-0.2
2,376,906	+				-1.3
2,376,906	+				-0.1
2,376,907	-				+0.9
2,376,907	-				+0.3
2,376,907	-				+3.2
2,376,918	+				-1.9
2,376,918	+				+0.0
2,376,918	+				+0.7
2,376,918	+				+2.1
2,376,918	+				-1.7
2,376,918	+				-0.3
2,376,918	+				+2.2
2,376,918	+				+1.5
2,376,918	+				+0.9
2,376,918	+				+0.5
2,376,918	+				+0.8
2,376,919	-				+1.1
2,376,919	-				+0.4
2,376,919	-				-0.6
2,376,919	-				-2.0
2,376,923	-				+2.7
2,376,995	+		PFLU_RS30660	0.39	-1.1
2,376,995	+		PFLU_RS30660	0.39	+2.2
2,377,102	-				+0.8
2,377,102	-				+2.6
2,377,109	-				-0.1
2,377,109	-				+0.9
2,377,109	-				+0.8
2,377,110	+				+0.0
2,377,110	+				+0.8
2,377,110	+				+1.0
2,377,110	+				+2.6
2,377,110	+				+0.0
2,377,110	+				-0.1
2,377,110	+				+0.4
2,377,110	+				+0.1
2,377,110	+				+3.2
2,377,110	+				-0.9
2,377,111	-				-1.5
2,377,111	-				-0.4
2,377,111	-				+0.9
2,377,111	-				-0.2
2,377,111	-				-0.9
2,377,111	-				+0.1
2,377,111	-				+0.0
2,377,111	-				-2.7
2,377,114	+				-0.6
2,377,114	+				-0.6
2,377,114	+				-0.3
2,377,114	+				+0.5
2,377,114	+				+0.9
2,377,114	+				+0.3
2,377,114	+				+0.9
2,377,114	+				+0.7
2,377,114	+				-0.6
2,377,114	+				+0.8
2,377,115	-				-0.4
2,377,115	-				+0.8
2,377,115	-				-1.3
2,377,115	-				+1.0
2,377,115	-				-0.9
2,377,115	-				-0.2
2,377,115	-				-0.3
2,377,136	+				+1.0
2,377,151	+				+1.2
2,377,152	-				+0.7
2,377,152	-				-0.4
2,377,204	-				-1.3
2,377,223	+				-0.1
2,377,223	+				-0.7
2,377,224	-				-1.9
2,377,224	-				+0.2
2,377,224	-				-0.1
2,377,237	+				-0.6
2,377,237	+				-0.8
2,377,238	-				-1.3
2,377,238	-				-0.8
2,377,238	-				+0.4
2,377,241	+				-2.6
2,377,241	+				-0.9
2,377,242	-				-0.8
2,377,242	-				+1.3
2,377,303	-				-0.1
2,377,325	+				-0.1
2,377,325	+				-1.9
2,377,349	+				-1.3
2,377,349	+				-1.1
2,377,350	-				-1.2
2,377,350	-				-0.6
2,377,350	-				+0.4
2,377,354	-				-1.7
2,377,432	+				+0.4
2,377,433	-				-2.0