Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10125

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
2,228,842	+				-1.1
2,228,842	+				+0.9
2,228,842	+				+0.1
2,228,842	+				-0.4
2,228,842	+				+0.7
2,228,843	-				-1.3
2,228,877	+				+0.1
2,228,878	-				-1.6
2,229,012	+				+0.7
2,229,022	+				-0.2
2,229,022	+				+2.0
2,229,022	+				+0.2
2,229,022	+				+0.5
2,229,022	+				-1.1
2,229,022	+				+0.6
2,229,022	+				+1.3
2,229,023	-				-0.4
2,229,023	-				-2.6
2,229,023	-				-1.4
2,229,023	-				+0.4
2,229,023	-				+0.7
2,229,023	-				+0.6
2,229,023	-				-1.9
2,229,023	-				-0.7
2,229,024	+				+0.5
2,229,025	-				+1.5
2,229,032	+				+0.2
2,229,068	-				+1.4
2,229,092	+				-0.3
2,229,092	+				-1.3
2,229,093	-				-0.5
2,229,093	-				-0.4
2,229,093	-				+0.6
2,229,093	-				-0.7
2,229,111	+				-0.3
2,229,112	-				-0.5
2,229,122	+				+2.3
2,229,122	+				-0.2
2,229,129	+				+1.0
2,229,130	-				+1.0
2,229,169	-				+1.9
2,229,302	-		PFLU_RS10120	0.33	-0.8
2,229,370	+		PFLU_RS10120	0.58	-1.7
2,229,370	+		PFLU_RS10120	0.58	-0.1
2,229,520	+				-0.9
2,229,568	-				-0.5
2,229,591	+				+1.0
2,229,591	+				-1.7
2,229,592	-				-0.2
2,229,601	+				+0.2
2,229,601	+				+0.5
2,229,601	+				-2.6
2,229,601	+				+0.6
2,229,601	+				-0.3
2,229,601	+				-0.5
2,229,602	-				+0.8
2,229,602	-				+1.3
2,229,602	-				+0.5
2,229,602	-				-0.7
2,229,605	+				+2.3
2,229,605	+				-1.0
2,229,605	+				-0.7
2,229,605	+				+2.3
2,229,606	-				-1.0
2,229,621	+				+1.7
2,229,621	+				+1.3
2,229,621	+				-0.1
2,229,710	+				-0.8
2,229,711	-				-0.4
2,229,711	-				-0.7
2,229,722	+				+0.6
2,229,723	-				+0.4
2,229,735	+				-2.3
2,229,736	-				-1.0
2,229,736	-				+0.8
2,229,744	+				-0.4
2,230,007	+		PFLU_RS10125	0.25	+0.7
2,230,007	+		PFLU_RS10125	0.25	+0.0
2,230,008	-		PFLU_RS10125	0.25	-1.4
2,230,008	-		PFLU_RS10125	0.25	+1.9
2,230,008	-		PFLU_RS10125	0.25	-0.7
2,230,008	-		PFLU_RS10125	0.25	+0.6
2,230,008	-		PFLU_RS10125	0.25	+0.6
2,230,075	+		PFLU_RS10125	0.31	+0.0
2,230,086	+		PFLU_RS10125	0.32	+0.8
2,230,087	-		PFLU_RS10125	0.32	+1.7
2,230,087	-		PFLU_RS10125	0.32	+0.7
2,230,182	-		PFLU_RS10125	0.40	+0.4
2,230,341	+		PFLU_RS10125	0.54	+0.2
2,230,368	+		PFLU_RS10125	0.56	+0.9
2,230,368	+		PFLU_RS10125	0.56	-0.0
2,230,368	+		PFLU_RS10125	0.56	-1.3
2,230,368	+		PFLU_RS10125	0.56	+1.9
2,230,368	+		PFLU_RS10125	0.56	+1.1
2,230,368	+		PFLU_RS10125	0.56	-0.6
2,230,368	+		PFLU_RS10125	0.56	+0.2
2,230,368	+		PFLU_RS10125	0.56	-0.1
2,230,368	+		PFLU_RS10125	0.56	-2.5
2,230,368	+		PFLU_RS10125	0.56	+0.1
2,230,368	+		PFLU_RS10125	0.56	+1.1
2,230,368	+		PFLU_RS10125	0.56	+1.1
2,230,369	-		PFLU_RS10125	0.56	+0.6
2,230,369	-		PFLU_RS10125	0.56	-0.8
2,230,369	-		PFLU_RS10125	0.56	+0.0
2,230,369	-		PFLU_RS10125	0.56	-1.2
2,230,369	-		PFLU_RS10125	0.56	-0.9
2,230,369	-		PFLU_RS10125	0.56	+0.5
2,230,369	-		PFLU_RS10125	0.56	+0.5
2,230,369	-		PFLU_RS10125	0.56	-1.9
2,230,369	-		PFLU_RS10125	0.56	+0.3
2,230,607	+		PFLU_RS10125	0.77	+0.5
2,230,607	+		PFLU_RS10125	0.77	-0.5
2,230,607	+		PFLU_RS10125	0.77	-1.2
2,230,607	+		PFLU_RS10125	0.77	+0.3
2,230,608	-		PFLU_RS10125	0.77	-1.6
2,230,608	-		PFLU_RS10125	0.77	-1.3
2,230,608	-		PFLU_RS10125	0.77	+0.5
2,230,608	-		PFLU_RS10125	0.77	-0.5
2,230,608	-		PFLU_RS10125	0.77	+0.9
2,230,608	-		PFLU_RS10125	0.77	+0.7
2,230,608	-		PFLU_RS10125	0.77	-2.1
2,230,885	-				-0.1
2,230,896	+				+0.5
2,230,896	+				+0.0
2,230,896	+				-0.0
2,230,896	+				+1.0
2,230,897	-				+1.5
2,230,897	-				+0.5
2,230,897	-				+0.3
2,230,899	+				-0.3
2,230,899	+				-0.5
2,230,899	+				+0.1
2,230,899	+				-0.1
2,230,899	+				+0.3
2,230,900	-				+1.4
2,230,900	-				-2.2
2,230,900	-				+0.5
2,230,900	-				-0.4
2,230,904	-				+0.7
2,230,904	-				+0.4
2,230,904	-				-1.6
2,230,904	-				-0.9
2,230,904	-				+0.4
2,230,932	+				-1.2
2,230,932	+				-1.2
2,230,933	-				+0.6
2,231,050	+				+1.4
2,231,050	+				+0.6
2,231,051	-				+0.3
2,231,051	-				-1.9
2,231,051	-				+0.6
2,231,321	+		PFLU_RS10130	0.22	-0.1
2,231,321	+		PFLU_RS10130	0.22	-0.8
2,231,418	+		PFLU_RS10130	0.27	+0.3
2,231,418	+		PFLU_RS10130	0.27	-0.9
2,231,418	+		PFLU_RS10130	0.27	-0.1
2,231,418	+		PFLU_RS10130	0.27	-0.4
2,231,418	+		PFLU_RS10130	0.27	-1.5
2,231,418	+		PFLU_RS10130	0.27	-0.3
2,231,418	+		PFLU_RS10130	0.27	-0.6
2,231,418	+		PFLU_RS10130	0.27	-1.1
2,231,418	+		PFLU_RS10130	0.27	+0.7
2,231,418	+		PFLU_RS10130	0.27	-0.5
2,231,418	+		PFLU_RS10130	0.27	+0.8
2,231,418	+		PFLU_RS10130	0.27	+0.3
2,231,418	+		PFLU_RS10130	0.27	-0.1
2,231,418	+		PFLU_RS10130	0.27	-1.1
2,231,418	+		PFLU_RS10130	0.27	-2.3
2,231,418	+		PFLU_RS10130	0.27	-0.5
2,231,418	+		PFLU_RS10130	0.27	-1.5
2,231,418	+		PFLU_RS10130	0.27	-0.2
2,231,419	-		PFLU_RS10130	0.27	+0.3
2,231,419	-		PFLU_RS10130	0.27	-0.4
2,231,419	-		PFLU_RS10130	0.27	+1.5
2,231,419	-		PFLU_RS10130	0.27	+0.3
2,231,419	-		PFLU_RS10130	0.27	-0.7
2,231,419	-		PFLU_RS10130	0.27	-3.1
2,231,419	-		PFLU_RS10130	0.27	-0.2
2,231,419	-		PFLU_RS10130	0.27	-0.7
2,231,419	-		PFLU_RS10130	0.27	+0.3
2,231,419	-		PFLU_RS10130	0.27	-1.0
2,231,419	-		PFLU_RS10130	0.27	+1.3
2,231,419	-		PFLU_RS10130	0.27	+0.3
2,231,419	-		PFLU_RS10130	0.27	-1.1
2,231,419	-		PFLU_RS10130	0.27	-0.9
2,231,422	+		PFLU_RS10130	0.27	-1.9
2,231,422	+		PFLU_RS10130	0.27	-1.5
2,231,422	+		PFLU_RS10130	0.27	-0.8
2,231,423	-		PFLU_RS10130	0.27	+0.5
2,231,423	-		PFLU_RS10130	0.27	+1.7
2,231,423	-		PFLU_RS10130	0.27	+0.0
2,231,423	-		PFLU_RS10130	0.27	-0.3
2,231,423	-		PFLU_RS10130	0.27	-1.0
2,231,423	-		PFLU_RS10130	0.27	+1.7
2,231,423	-		PFLU_RS10130	0.27	-1.1
2,231,423	-		PFLU_RS10130	0.27	-0.5
2,231,423	-		PFLU_RS10130	0.27	+0.6
2,231,701	+		PFLU_RS10130	0.43	-1.0
2,231,702	-		PFLU_RS10130	0.43	-1.3
2,231,702	-		PFLU_RS10130	0.43	-1.5