Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08310

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,859,404	+		PFLU_RS08305	0.45	+1.1
1,859,404	+		PFLU_RS08305	0.45	-1.4
1,859,404	+		PFLU_RS08305	0.45	-1.6
1,859,404	+		PFLU_RS08305	0.45	-2.0
1,859,404	+		PFLU_RS08305	0.45	-0.5
1,859,404	+		PFLU_RS08305	0.45	-0.6
1,859,405	-		PFLU_RS08305	0.46	-2.7
1,859,405	-		PFLU_RS08305	0.46	+0.1
1,859,405	-		PFLU_RS08305	0.46	-0.1
1,859,405	-		PFLU_RS08305	0.46	+1.5
1,859,405	-		PFLU_RS08305	0.46	-0.7
1,859,498	+		PFLU_RS08305	0.52	+0.2
1,859,561	+		PFLU_RS08305	0.57	+0.5
1,859,561	+		PFLU_RS08305	0.57	+2.0
1,859,562	-		PFLU_RS08305	0.57	+0.8
1,859,562	-		PFLU_RS08305	0.57	+0.5
1,859,599	+		PFLU_RS08305	0.59	+0.8
1,859,599	+		PFLU_RS08305	0.59	+0.9
1,859,599	+		PFLU_RS08305	0.59	+0.2
1,859,599	+		PFLU_RS08305	0.59	+0.3
1,859,599	+		PFLU_RS08305	0.59	+1.0
1,859,599	+		PFLU_RS08305	0.59	-1.4
1,859,599	+		PFLU_RS08305	0.59	-2.1
1,859,600	-		PFLU_RS08305	0.59	+0.5
1,859,600	-		PFLU_RS08305	0.59	+0.5
1,859,600	-		PFLU_RS08305	0.59	+0.7
1,859,603	+		PFLU_RS08305	0.59	-0.3
1,859,603	+		PFLU_RS08305	0.59	+0.2
1,859,603	+		PFLU_RS08305	0.59	+1.3
1,859,604	-		PFLU_RS08305	0.60	-1.0
1,859,604	-		PFLU_RS08305	0.60	+0.6
1,859,604	-		PFLU_RS08305	0.60	-0.7
1,859,604	-		PFLU_RS08305	0.60	+1.7
1,859,604	-		PFLU_RS08305	0.60	+0.9
1,859,604	-		PFLU_RS08305	0.60	+0.9
1,859,604	-		PFLU_RS08305	0.60	+0.6
1,859,615	+		PFLU_RS08305	0.60	+1.3
1,859,615	+		PFLU_RS08305	0.60	+0.9
1,859,616	-		PFLU_RS08305	0.60	+1.7
1,859,616	-		PFLU_RS08305	0.60	+1.2
1,859,876	+		PFLU_RS08305	0.79	-0.3
1,859,957	+		PFLU_RS08305	0.84	+0.2
1,859,958	-		PFLU_RS08305	0.84	-1.2
1,859,958	-		PFLU_RS08305	0.84	-0.5
1,860,051	+				+1.2
1,860,051	+				+1.0
1,860,052	-				+0.4
1,860,066	+				-0.1
1,860,066	+				+0.3
1,860,066	+				+0.8
1,860,067	-				-0.5
1,860,067	-				+0.6
1,860,067	-				-1.1
1,860,067	-				-0.7
1,860,067	-				+0.6
1,860,067	-				+1.2
1,860,067	-				+1.6
1,860,067	-				+1.1
1,860,067	-				+0.9
1,860,086	+				-1.2
1,860,086	+				+0.5
1,860,086	+				+1.4
1,860,086	+				-0.7
1,860,086	+				-0.1
1,860,086	+				+0.2
1,860,086	+				-1.6
1,860,086	+				+0.4
1,860,086	+				-1.0
1,860,086	+				-0.5
1,860,086	+				+1.7
1,860,087	-				-0.2
1,860,087	-				+0.1
1,860,087	-				-1.3
1,860,087	-				-0.6
1,860,087	-				+0.3
1,860,087	-				-0.6
1,860,087	-				+0.6
1,860,087	-				+0.8
1,860,087	-				+0.3
1,860,087	-				+0.5
1,860,087	-				-0.8
1,860,087	-				+1.4
1,860,087	-				+0.8
1,860,087	-				-0.6
1,860,087	-				+0.9
1,860,091	+				-1.6
1,860,091	+				+1.5
1,860,091	+				-0.3
1,860,091	+				-1.0
1,860,091	+				-1.6
1,860,091	+				+0.5
1,860,092	-				-1.6
1,860,092	-				+0.3
1,860,092	-				+0.5
1,860,092	-				+0.9
1,860,092	-				+1.7
1,860,092	-				+0.9
1,860,092	-				-1.1
1,860,094	+				+0.7
1,860,094	+				+2.5
1,860,094	+				-0.3
1,860,094	+				+1.1
1,860,094	+				+0.1
1,860,095	-				+0.8
1,860,095	-				+2.0
1,860,095	-				-0.0
1,860,095	-				+1.1
1,860,107	+				+1.1
1,860,107	+				+0.7
1,860,107	+				-0.3
1,860,107	+				-1.4
1,860,107	+				+1.9
1,860,108	-				+0.3
1,860,108	-				-1.7
1,860,108	-				+0.8
1,860,108	-				-0.1
1,860,108	-				+1.2
1,860,110	+				-1.4
1,860,110	+				-0.2
1,860,110	+				-0.5
1,860,110	+				+0.7
1,860,111	-				+0.9
1,860,111	-				+1.6
1,860,111	-				-2.3
1,860,260	+				+0.0
1,860,260	+				+0.7
1,860,260	+				+0.6
1,860,261	-				-0.4
1,860,261	-				+0.7
1,860,261	-				-1.8
1,860,261	-				+0.1
1,860,261	-				-1.3
1,860,261	-				-0.7
1,860,261	-				-0.2
1,860,261	-				+1.3
1,860,264	+				-1.1
1,860,264	+				-0.8
1,860,264	+				+0.0
1,860,264	+				-0.2
1,860,264	+				+0.2
1,860,264	+				+1.7
1,860,265	-				+0.6
1,860,276	-				-2.2
1,860,344	+		PFLU_RS08310	0.14	-1.2
1,860,557	+		PFLU_RS08310	0.63	-0.5
1,860,557	+		PFLU_RS08310	0.63	+1.8
1,860,590	+		PFLU_RS08310	0.71	-1.6
1,860,614	+		PFLU_RS08310	0.76	+0.1
1,860,615	-		PFLU_RS08310	0.77	+0.9
1,860,625	-		PFLU_RS08310	0.79	-0.1
1,860,826	-				+1.5
1,860,826	-				-1.9
1,860,833	+				+0.9
1,860,833	+				+0.2
1,860,833	+				+0.2
1,860,834	-				-0.6
1,860,834	-				-1.4
1,860,834	-				+0.2
1,860,834	-				+0.4
1,860,989	+				+1.0
1,860,989	+				+1.5
1,861,263	-				+0.5
1,861,326	-				+0.1
1,861,353	-				-0.6
1,861,353	-				+0.1
1,861,419	+				-0.8
1,861,419	+				-0.1
1,861,419	+				+0.5
1,861,419	+				-1.6
1,861,419	+				+0.6
1,861,419	+				-1.4
1,861,419	+				+0.2
1,861,420	-				-0.5
1,861,420	-				-1.6
1,861,420	-				+0.2
1,861,484	+		PFLU_RS08320	0.12	+0.2
1,861,484	+		PFLU_RS08320	0.12	+1.3
1,861,484	+		PFLU_RS08320	0.12	-0.2
1,861,484	+		PFLU_RS08320	0.12	-0.1
1,861,484	+		PFLU_RS08320	0.12	+1.6
1,861,484	+		PFLU_RS08320	0.12	+0.0
1,861,484	+		PFLU_RS08320	0.12	+1.3
1,861,484	+		PFLU_RS08320	0.12	-0.5
1,861,485	-		PFLU_RS08320	0.12	-1.0
1,861,485	-		PFLU_RS08320	0.12	-1.2
1,861,485	-		PFLU_RS08320	0.12	+1.0
1,861,485	-		PFLU_RS08320	0.12	-0.7
1,861,485	-		PFLU_RS08320	0.12	+0.2
1,861,485	-		PFLU_RS08320	0.12	+1.9
1,861,485	-		PFLU_RS08320	0.12	-0.3
1,861,485	-		PFLU_RS08320	0.12	+0.4
1,861,485	-		PFLU_RS08320	0.12	-1.2
1,861,485	-		PFLU_RS08320	0.12	-0.6
1,861,485	-		PFLU_RS08320	0.12	-1.2
1,861,485	-		PFLU_RS08320	0.12	+0.6
1,861,485	-		PFLU_RS08320	0.12	-0.4
1,861,485	-		PFLU_RS08320	0.12	-0.9
1,861,566	-		PFLU_RS08320	0.17	+0.9