Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07780

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,731,073	+		PFLU_RS07770	0.32	-0.6
1,731,212	+		PFLU_RS07770	0.49	+2.0
1,731,212	+		PFLU_RS07770	0.49	-2.0
1,731,213	-		PFLU_RS07770	0.49	-1.2
1,731,265	+		PFLU_RS07770	0.56	-1.2
1,731,265	+		PFLU_RS07770	0.56	-0.8
1,731,265	+		PFLU_RS07770	0.56	+0.2
1,731,266	-		PFLU_RS07770	0.56	-0.8
1,731,266	-		PFLU_RS07770	0.56	+0.4
1,731,266	-		PFLU_RS07770	0.56	+2.3
1,731,266	-		PFLU_RS07770	0.56	+1.7
1,731,266	-		PFLU_RS07770	0.56	+0.5
1,731,266	-		PFLU_RS07770	0.56	+0.5
1,731,266	-		PFLU_RS07770	0.56	+0.1
1,731,397	+		PFLU_RS07770	0.71	-0.3
1,731,398	-		PFLU_RS07770	0.72	-0.0
1,731,436	+		PFLU_RS07770	0.76	-0.8
1,731,436	+		PFLU_RS07770	0.76	+0.2
1,731,436	+		PFLU_RS07770	0.76	-0.5
1,731,437	-		PFLU_RS07770	0.76	+1.8
1,731,437	-		PFLU_RS07770	0.76	-2.0
1,731,437	-		PFLU_RS07770	0.76	+0.5
1,731,437	-		PFLU_RS07770	0.76	-1.2
1,731,538	+		PFLU_RS07770	0.88	-0.9
1,731,539	-		PFLU_RS07770	0.89	+1.0
1,731,539	-		PFLU_RS07770	0.89	+1.1
1,731,539	-		PFLU_RS07770	0.89	+2.5
1,731,539	-		PFLU_RS07770	0.89	+0.9
1,731,539	-		PFLU_RS07770	0.89	-1.2
1,731,547	+		PFLU_RS07770	0.90	+1.3
1,731,547	+		PFLU_RS07770	0.90	+1.1
1,731,548	-		PFLU_RS07770	0.90	-0.5
1,731,548	-		PFLU_RS07770	0.90	+1.1
1,731,548	-		PFLU_RS07770	0.90	+2.1
1,731,589	-				+1.9
1,731,697	+				+0.4
1,731,698	-				+0.9
1,731,728	+		PFLU_RS07775	0.12	-0.5
1,731,728	+		PFLU_RS07775	0.12	-0.9
1,731,729	-		PFLU_RS07775	0.12	-1.0
1,731,729	-		PFLU_RS07775	0.12	-0.4
1,731,774	+		PFLU_RS07775	0.29	+0.6
1,731,774	+		PFLU_RS07775	0.29	-0.7
1,731,775	-		PFLU_RS07775	0.30	-1.1
1,731,840	+		PFLU_RS07775	0.54	-0.4
1,731,841	-		PFLU_RS07775	0.54	+0.4
1,731,977	+				+0.0
1,731,977	+				+1.7
1,731,978	-				-0.1
1,731,995	+				+0.1
1,731,995	+				-0.5
1,731,995	+				-0.7
1,731,995	+				+0.5
1,731,996	-				-1.4
1,731,996	-				-0.8
1,731,996	-				-1.0
1,731,996	-				-0.3
1,731,996	-				-3.0
1,732,021	+				+0.2
1,732,035	+				+1.1
1,732,035	+				+0.1
1,732,036	-				-1.4
1,732,040	+				-0.5
1,732,041	-				-0.0
1,732,041	-				-0.6
1,732,041	-				+0.6
1,732,360	+		PFLU_RS07780	0.47	-0.0
1,732,698	+				+1.1
1,732,698	+				+0.0
1,732,699	-				+0.7
1,732,746	+				-0.4
1,732,746	+				+0.6
1,732,746	+				-1.1
1,732,747	-				+1.0
1,732,747	-				+1.3
1,732,747	-				-0.5
1,732,747	-				-1.3
1,732,747	-				-1.7
1,732,747	-				-0.6
1,732,753	-				-0.5
1,732,769	+				+1.2
1,732,769	+				-0.2
1,732,769	+				-0.6
1,732,769	+				+1.0
1,732,769	+				-0.7
1,732,770	-				+0.1
1,732,797	+				+0.1
1,732,798	-				-1.2
1,732,816	+				-0.5
1,732,816	+				-0.0
1,732,816	+				-1.1
1,732,816	+				+0.1
1,732,817	-				+1.2
1,732,817	-				-0.5
1,732,818	+				+1.0
1,732,818	+				-1.9
1,732,818	+				+1.2
1,732,818	+				+1.5
1,732,818	+				+1.6
1,732,818	+				-0.3
1,732,818	+				+1.0
1,732,818	+				+0.5
1,732,818	+				-0.5
1,732,818	+				+1.8
1,732,818	+				-0.9
1,732,818	+				+1.1
1,732,818	+				+1.3
1,732,818	+				+1.2
1,732,818	+				+1.2
1,732,818	+				+0.6
1,732,818	+				-0.3
1,732,819	-				+2.8
1,732,819	-				+0.0
1,732,819	-				-0.0
1,732,819	-				-2.4
1,732,819	-				-1.2
1,732,819	-				-1.4
1,732,819	-				-1.3
1,732,819	-				-0.9
1,732,819	-				+2.5
1,732,819	-				-2.5
1,732,819	-				+0.5
1,732,819	-				-1.5
1,732,819	-				+0.5
1,732,819	-				+1.3
1,732,819	-				-0.6
1,732,819	-				+2.5
1,732,819	-				-1.0
1,732,819	-				-2.3
1,732,819	-				-0.8
1,732,819	-				-1.9
1,732,831	-				+0.4
1,732,841	+				-0.2
1,732,877	-				-1.7
1,732,893	-				-0.0
1,732,893	-				-1.4
1,732,893	-				-0.8
1,732,923	+				-0.0
1,732,924	-				-1.0
1,732,924	-				-1.8
1,732,924	-				-1.2
1,733,017	+		PFLU_RS07785	0.20	+0.2
1,733,017	+		PFLU_RS07785	0.20	-1.5
1,733,017	+		PFLU_RS07785	0.20	-1.8
1,733,017	+		PFLU_RS07785	0.20	-1.8
1,733,017	+		PFLU_RS07785	0.20	-0.3
1,733,017	+		PFLU_RS07785	0.20	-1.0
1,733,018	-		PFLU_RS07785	0.20	+0.5
1,733,018	-		PFLU_RS07785	0.20	-0.9
1,733,018	-		PFLU_RS07785	0.20	+0.2
1,733,018	-		PFLU_RS07785	0.20	-1.5
1,733,018	-		PFLU_RS07785	0.20	-1.0
1,733,021	+		PFLU_RS07785	0.21	-0.0
1,733,022	-		PFLU_RS07785	0.21	-1.9
1,733,022	-		PFLU_RS07785	0.21	-1.7
1,733,022	-		PFLU_RS07785	0.21	-1.5
1,733,022	-		PFLU_RS07785	0.21	+0.2
1,733,048	+		PFLU_RS07785	0.25	-1.3
1,733,048	+		PFLU_RS07785	0.25	-0.6
1,733,048	+		PFLU_RS07785	0.25	+0.2
1,733,048	+		PFLU_RS07785	0.25	-1.5
1,733,048	+		PFLU_RS07785	0.25	+0.2
1,733,049	-		PFLU_RS07785	0.25	-1.9
1,733,049	-		PFLU_RS07785	0.25	-1.6
1,733,049	-		PFLU_RS07785	0.25	-1.7
1,733,049	-		PFLU_RS07785	0.25	-1.5
1,733,059	+		PFLU_RS07785	0.26	-1.3
1,733,303	+		PFLU_RS07785	0.62	-1.0
1,733,303	+		PFLU_RS07785	0.62	-1.4
1,733,303	+		PFLU_RS07785	0.62	+0.5
1,733,303	+		PFLU_RS07785	0.62	-1.9
1,733,303	+		PFLU_RS07785	0.62	-1.3
1,733,304	-		PFLU_RS07785	0.62	+0.5
1,733,304	-		PFLU_RS07785	0.62	-1.5
1,733,304	-		PFLU_RS07785	0.62	-1.3
1,733,304	-		PFLU_RS07785	0.62	-1.5
1,733,357	+		PFLU_RS07785	0.70	-1.3
1,733,357	+		PFLU_RS07785	0.70	-0.3
1,733,357	+		PFLU_RS07785	0.70	+1.0
1,733,357	+		PFLU_RS07785	0.70	-1.9
1,733,358	-		PFLU_RS07785	0.70	-2.1
1,733,358	-		PFLU_RS07785	0.70	-1.0
1,733,358	-		PFLU_RS07785	0.70	-1.9
1,733,358	-		PFLU_RS07785	0.70	-0.7
1,733,358	-		PFLU_RS07785	0.70	+0.5
1,733,358	-		PFLU_RS07785	0.70	-1.9
1,733,358	-		PFLU_RS07785	0.70	-2.5
1,733,358	-		PFLU_RS07785	0.70	-0.0
1,733,358	-		PFLU_RS07785	0.70	-0.8
1,733,358	-		PFLU_RS07785	0.70	-0.6
1,733,369	+		PFLU_RS07785	0.71	-2.0
1,733,369	+		PFLU_RS07785	0.71	-1.7
1,733,369	+		PFLU_RS07785	0.71	-1.8
1,733,369	+		PFLU_RS07785	0.71	-1.4
1,733,369	+		PFLU_RS07785	0.71	+0.2
1,733,369	+		PFLU_RS07785	0.71	-2.1
1,733,369	+		PFLU_RS07785	0.71	+0.2
1,733,370	-		PFLU_RS07785	0.71	-2.2
1,733,370	-		PFLU_RS07785	0.71	+0.7
1,733,370	-		PFLU_RS07785	0.71	+0.2
1,733,370	-		PFLU_RS07785	0.71	-1.8
1,733,370	-		PFLU_RS07785	0.71	-2.0
1,733,370	-		PFLU_RS07785	0.71	-2.0
1,733,381	+		PFLU_RS07785	0.73	-2.5
1,733,387	+		PFLU_RS07785	0.74	-1.2
1,733,387	+		PFLU_RS07785	0.74	-1.0
1,733,387	+		PFLU_RS07785	0.74	-1.3
1,733,387	+		PFLU_RS07785	0.74	-0.8
1,733,387	+		PFLU_RS07785	0.74	-0.0
1,733,387	+		PFLU_RS07785	0.74	-0.9
1,733,387	+		PFLU_RS07785	0.74	-0.0
1,733,388	-		PFLU_RS07785	0.74	-2.7
1,733,388	-		PFLU_RS07785	0.74	-1.8
1,733,388	-		PFLU_RS07785	0.74	-2.1
1,733,388	-		PFLU_RS07785	0.74	-0.9
1,733,388	-		PFLU_RS07785	0.74	-0.5
1,733,388	-		PFLU_RS07785	0.74	+0.7
1,733,388	-		PFLU_RS07785	0.74	-1.2
1,733,389	+		PFLU_RS07785	0.74	-1.2
1,733,389	+		PFLU_RS07785	0.74	-1.9
1,733,389	+		PFLU_RS07785	0.74	-1.9
1,733,389	+		PFLU_RS07785	0.74	-2.0
1,733,389	+		PFLU_RS07785	0.74	-0.0
1,733,389	+		PFLU_RS07785	0.74	-0.0
1,733,390	-		PFLU_RS07785	0.74	-0.6
1,733,390	-		PFLU_RS07785	0.74	-1.6
1,733,390	-		PFLU_RS07785	0.74	+0.5
1,733,390	-		PFLU_RS07785	0.74	-1.4
1,733,485	+		PFLU_RS07785	0.88	-2.0
1,733,485	+		PFLU_RS07785	0.88	-1.4
1,733,486	-		PFLU_RS07785	0.88	-1.2
1,733,489	+		PFLU_RS07785	0.89	-1.5
1,733,489	+		PFLU_RS07785	0.89	-1.2
1,733,489	+		PFLU_RS07785	0.89	-1.0
1,733,489	+		PFLU_RS07785	0.89	-2.4
1,733,489	+		PFLU_RS07785	0.89	-0.9
1,733,489	+		PFLU_RS07785	0.89	-1.8
1,733,489	+		PFLU_RS07785	0.89	+0.5
1,733,489	+		PFLU_RS07785	0.89	-2.4
1,733,489	+		PFLU_RS07785	0.89	-2.0
1,733,489	+		PFLU_RS07785	0.89	+1.0
1,733,489	+		PFLU_RS07785	0.89	-0.9
1,733,490	-		PFLU_RS07785	0.89	+0.4
1,733,490	-		PFLU_RS07785	0.89	-0.5
1,733,490	-		PFLU_RS07785	0.89	-1.3
1,733,490	-		PFLU_RS07785	0.89	-3.4
1,733,490	-		PFLU_RS07785	0.89	-1.5
1,733,490	-		PFLU_RS07785	0.89	+0.5
1,733,490	-		PFLU_RS07785	0.89	-1.0
1,733,490	-		PFLU_RS07785	0.89	-1.0
1,733,490	-		PFLU_RS07785	0.89	-0.0
1,733,490	-		PFLU_RS07785	0.89	+0.1
1,733,490	-		PFLU_RS07785	0.89	-1.8
1,733,511	-				-1.3
1,733,511	-				-0.9
1,733,564	+				+0.3
1,733,565	-				-0.2
1,733,622	-				+0.5
1,733,637	-				+0.8
1,733,637	-				+0.4
1,733,637	-				-0.8