Experiment: L-Arabinose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS06370 and PFLU_RS06375 are separated by 157 nucleotides PFLU_RS06375 and PFLU_RS06380 are separated by 180 nucleotides PFLU_RS06380 and PFLU_RS06385 overlap by 4 nucleotides
PFLU_RS06370: PFLU_RS06370 - 3-deoxy-8-phosphooctulonate synthase, at 1,428,860 to 1,429,705
_RS06370
PFLU_RS06375: PFLU_RS06375 - phosphopyruvate hydratase, at 1,429,863 to 1,431,152
_RS06375
PFLU_RS06380: PFLU_RS06380 - cell division protein FtsB, at 1,431,333 to 1,431,611
_RS06380
PFLU_RS06385: PFLU_RS06385 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,431,608 to 1,432,315
_RS06385
Position (kb)
1429
1430
1431
1432 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1429.726 kb on + strand at 1429.727 kb on - strand at 1429.736 kb on + strand at 1429.737 kb on - strand at 1429.737 kb on - strand at 1430.951 kb on + strand, within PFLU_RS06375 at 1431.123 kb on + strand at 1431.123 kb on + strand at 1431.123 kb on + strand at 1431.123 kb on + strand at 1431.123 kb on + strand at 1431.124 kb on - strand at 1431.124 kb on - strand at 1431.124 kb on - strand at 1431.124 kb on - strand at 1431.157 kb on + strand at 1431.157 kb on + strand at 1431.158 kb on - strand at 1431.158 kb on - strand at 1431.158 kb on - strand at 1431.158 kb on - strand at 1431.158 kb on - strand at 1431.158 kb on - strand at 1431.165 kb on - strand at 1431.173 kb on + strand at 1431.173 kb on + strand at 1431.173 kb on + strand at 1431.215 kb on + strand at 1431.215 kb on + strand at 1431.215 kb on + strand at 1431.274 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C); with MOPS remove 1,429,726 + -1.4 1,429,727 - +0.0 1,429,736 + +1.6 1,429,737 - +0.0 1,429,737 - +0.2 1,430,951 + PFLU_RS06375 0.84 +1.0 1,431,123 + +0.5 1,431,123 + -1.2 1,431,123 + +0.6 1,431,123 + -1.2 1,431,123 + -1.0 1,431,124 - -1.5 1,431,124 - -1.2 1,431,124 - -0.6 1,431,124 - -1.0 1,431,157 + +1.5 1,431,157 + +2.2 1,431,158 - -0.6 1,431,158 - +0.4 1,431,158 - -1.1 1,431,158 - -0.2 1,431,158 - -1.3 1,431,158 - -0.2 1,431,165 - -1.9 1,431,173 + +1.6 1,431,173 + -0.8 1,431,173 + +0.4 1,431,215 + -0.3 1,431,215 + +0.3 1,431,215 + +0.7 1,431,274 + -0.7
Or see this region's nucleotide sequence