Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_23540 and OH686_23545 are separated by 102 nucleotides OH686_23545 and OH686_23550 are separated by 254 nucleotides
OH686_23540: OH686_23540 - Short-chain of various substrate specificities, at 4,769,242 to 4,770,036
_23540
OH686_23545: OH686_23545 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 4,770,139 to 4,771,089
_23545
OH686_23550: OH686_23550 - RND efflux system, inner membrane transporter , at 4,771,344 to 4,774,460
_23550
Position (kb) 4770
4771
4772 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.151 kb on + strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.152 kb on - strand at 4769.153 kb on + strand at 4769.153 kb on + strand at 4769.153 kb on + strand at 4769.154 kb on - strand at 4769.154 kb on - strand at 4769.158 kb on + strand at 4769.158 kb on + strand at 4769.186 kb on + strand at 4769.186 kb on + strand at 4769.186 kb on + strand at 4769.186 kb on + strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.187 kb on - strand at 4769.207 kb on + strand at 4769.207 kb on + strand at 4769.207 kb on + strand at 4769.207 kb on + strand at 4769.207 kb on + strand at 4769.207 kb on + strand at 4769.208 kb on - strand at 4769.208 kb on - strand at 4769.208 kb on - strand at 4769.208 kb on - strand at 4769.208 kb on - strand at 4769.239 kb on + strand at 4769.239 kb on + strand at 4769.239 kb on + strand at 4769.250 kb on + strand at 4769.250 kb on + strand at 4769.250 kb on + strand at 4769.251 kb on - strand at 4769.252 kb on + strand at 4769.252 kb on + strand at 4769.252 kb on + strand at 4769.252 kb on + strand at 4769.253 kb on - strand at 4769.253 kb on - strand at 4769.253 kb on - strand at 4769.253 kb on - strand at 4769.312 kb on + strand at 4769.312 kb on + strand at 4769.312 kb on + strand at 4769.312 kb on + strand at 4769.312 kb on + strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.313 kb on - strand at 4769.379 kb on + strand, within OH686_23540 at 4769.380 kb on - strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.392 kb on + strand, within OH686_23540 at 4769.393 kb on - strand, within OH686_23540 at 4769.393 kb on - strand, within OH686_23540 at 4769.393 kb on - strand, within OH686_23540 at 4769.393 kb on - strand, within OH686_23540 at 4769.393 kb on - strand, within OH686_23540 at 4769.412 kb on + strand, within OH686_23540 at 4769.412 kb on + strand, within OH686_23540 at 4769.413 kb on - strand, within OH686_23540 at 4769.437 kb on + strand, within OH686_23540 at 4769.437 kb on + strand, within OH686_23540 at 4769.438 kb on - strand, within OH686_23540 at 4769.438 kb on - strand, within OH686_23540 at 4769.489 kb on - strand, within OH686_23540 at 4769.489 kb on - strand, within OH686_23540 at 4769.489 kb on - strand, within OH686_23540 at 4769.526 kb on + strand, within OH686_23540 at 4769.526 kb on + strand, within OH686_23540 at 4769.526 kb on + strand, within OH686_23540 at 4769.527 kb on - strand, within OH686_23540 at 4769.527 kb on - strand, within OH686_23540 at 4769.527 kb on - strand, within OH686_23540 at 4769.527 kb on - strand, within OH686_23540 at 4769.619 kb on + strand, within OH686_23540 at 4769.619 kb on + strand, within OH686_23540 at 4769.619 kb on + strand, within OH686_23540 at 4769.620 kb on - strand, within OH686_23540 at 4769.620 kb on - strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.623 kb on + strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.624 kb on - strand, within OH686_23540 at 4769.673 kb on + strand, within OH686_23540 at 4769.673 kb on + strand, within OH686_23540 at 4769.674 kb on - strand, within OH686_23540 at 4769.707 kb on + strand, within OH686_23540 at 4769.707 kb on + strand, within OH686_23540 at 4769.707 kb on + strand, within OH686_23540 at 4769.707 kb on + strand, within OH686_23540 at 4769.707 kb on + strand, within OH686_23540 at 4769.708 kb on - strand, within OH686_23540 at 4769.708 kb on - strand, within OH686_23540 at 4769.708 kb on - strand, within OH686_23540 at 4769.717 kb on - strand, within OH686_23540 at 4769.773 kb on + strand, within OH686_23540 at 4769.784 kb on + strand, within OH686_23540 at 4769.785 kb on - strand, within OH686_23540 at 4769.785 kb on - strand, within OH686_23540 at 4769.785 kb on - strand, within OH686_23540 at 4769.822 kb on - strand, within OH686_23540 at 4769.972 kb on + strand at 4769.972 kb on + strand at 4769.972 kb on + strand at 4769.973 kb on - strand at 4770.083 kb on + strand at 4770.083 kb on + strand at 4770.084 kb on - strand at 4770.093 kb on + strand at 4770.094 kb on - strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.138 kb on + strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.139 kb on - strand at 4770.179 kb on + strand at 4770.179 kb on + strand at 4770.179 kb on + strand at 4770.241 kb on + strand, within OH686_23545 at 4770.241 kb on + strand, within OH686_23545 at 4770.241 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.574 kb on + strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.575 kb on - strand, within OH686_23545 at 4770.787 kb on + strand, within OH686_23545 at 4770.788 kb on - strand, within OH686_23545 at 4770.872 kb on + strand, within OH686_23545 at 4770.872 kb on + strand, within OH686_23545 at 4770.873 kb on - strand, within OH686_23545 at 4770.873 kb on - strand, within OH686_23545 at 4771.110 kb on + strand at 4771.110 kb on + strand at 4771.111 kb on - strand at 4771.111 kb on - strand at 4771.111 kb on - strand at 4771.337 kb on - strand at 4771.337 kb on - strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.377 kb on + strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.378 kb on - strand at 4771.978 kb on + strand, within OH686_23550 at 4771.979 kb on - strand, within OH686_23550 at 4771.979 kb on - strand, within OH686_23550
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,769,151 + -1.7 4,769,151 + -0.8 4,769,151 + -0.2 4,769,151 + +0.9 4,769,151 + -1.7 4,769,151 + +0.0 4,769,151 + -0.7 4,769,151 + +0.4 4,769,151 + +0.4 4,769,151 + -0.5 4,769,151 + +0.4 4,769,151 + -0.8 4,769,151 + -0.7 4,769,151 + -0.7 4,769,152 - -0.2 4,769,152 - -0.8 4,769,152 - -0.1 4,769,152 - +0.6 4,769,152 - +1.2 4,769,152 - -0.1 4,769,152 - -0.9 4,769,152 - -0.3 4,769,153 + +0.2 4,769,153 + -0.5 4,769,153 + -0.2 4,769,154 - -0.2 4,769,154 - -0.9 4,769,158 + -0.1 4,769,158 + -0.1 4,769,186 + +0.7 4,769,186 + -0.9 4,769,186 + -0.9 4,769,186 + -0.4 4,769,187 - -0.0 4,769,187 - -0.0 4,769,187 - +0.6 4,769,187 - -0.8 4,769,187 - -0.2 4,769,187 - -0.8 4,769,187 - +0.8 4,769,187 - +0.8 4,769,207 + +0.5 4,769,207 + +0.1 4,769,207 + +0.6 4,769,207 + +0.6 4,769,207 + -0.3 4,769,207 + -0.1 4,769,208 - -0.9 4,769,208 - -0.9 4,769,208 - -0.4 4,769,208 - -0.5 4,769,208 - +0.7 4,769,239 + -1.6 4,769,239 + +0.1 4,769,239 + +0.2 4,769,250 + +0.2 4,769,250 + -1.7 4,769,250 + +0.6 4,769,251 - +1.7 4,769,252 + +0.5 4,769,252 + -0.9 4,769,252 + +1.1 4,769,252 + +0.8 4,769,253 - -0.1 4,769,253 - +1.1 4,769,253 - +0.6 4,769,253 - +1.0 4,769,312 + +0.7 4,769,312 + -0.5 4,769,312 + +1.2 4,769,312 + +0.8 4,769,312 + -2.0 4,769,313 - -0.3 4,769,313 - +0.6 4,769,313 - -0.2 4,769,313 - -0.5 4,769,313 - -0.4 4,769,313 - -0.6 4,769,313 - -0.4 4,769,313 - +0.0 4,769,313 - +0.1 4,769,313 - -1.3 4,769,379 + OH686_23540 0.17 +0.2 4,769,380 - OH686_23540 0.17 -0.7 4,769,392 + OH686_23540 0.19 +0.9 4,769,392 + OH686_23540 0.19 -2.2 4,769,392 + OH686_23540 0.19 -1.7 4,769,392 + OH686_23540 0.19 +0.3 4,769,392 + OH686_23540 0.19 +0.1 4,769,392 + OH686_23540 0.19 -0.1 4,769,392 + OH686_23540 0.19 +0.1 4,769,392 + OH686_23540 0.19 -1.9 4,769,392 + OH686_23540 0.19 +0.3 4,769,392 + OH686_23540 0.19 +0.3 4,769,392 + OH686_23540 0.19 +0.2 4,769,392 + OH686_23540 0.19 -0.4 4,769,392 + OH686_23540 0.19 -0.2 4,769,392 + OH686_23540 0.19 -1.0 4,769,393 - OH686_23540 0.19 +0.0 4,769,393 - OH686_23540 0.19 -0.1 4,769,393 - OH686_23540 0.19 +0.1 4,769,393 - OH686_23540 0.19 +0.2 4,769,393 - OH686_23540 0.19 -0.5 4,769,412 + OH686_23540 0.21 -0.4 4,769,412 + OH686_23540 0.21 +0.1 4,769,413 - OH686_23540 0.22 +0.0 4,769,437 + OH686_23540 0.25 -0.4 4,769,437 + OH686_23540 0.25 +0.8 4,769,438 - OH686_23540 0.25 +0.6 4,769,438 - OH686_23540 0.25 -0.5 4,769,489 - OH686_23540 0.31 +0.7 4,769,489 - OH686_23540 0.31 +0.8 4,769,489 - OH686_23540 0.31 +0.1 4,769,526 + OH686_23540 0.36 +0.2 4,769,526 + OH686_23540 0.36 +0.1 4,769,526 + OH686_23540 0.36 -0.6 4,769,527 - OH686_23540 0.36 -0.4 4,769,527 - OH686_23540 0.36 -1.6 4,769,527 - OH686_23540 0.36 +0.5 4,769,527 - OH686_23540 0.36 +0.0 4,769,619 + OH686_23540 0.47 -0.7 4,769,619 + OH686_23540 0.47 +0.8 4,769,619 + OH686_23540 0.47 +0.9 4,769,620 - OH686_23540 0.48 +0.4 4,769,620 - OH686_23540 0.48 +0.4 4,769,623 + OH686_23540 0.48 -1.6 4,769,623 + OH686_23540 0.48 -0.4 4,769,623 + OH686_23540 0.48 +0.5 4,769,623 + OH686_23540 0.48 +0.2 4,769,623 + OH686_23540 0.48 -0.0 4,769,623 + OH686_23540 0.48 -0.1 4,769,623 + OH686_23540 0.48 +0.5 4,769,623 + OH686_23540 0.48 -0.7 4,769,623 + OH686_23540 0.48 +0.1 4,769,623 + OH686_23540 0.48 +0.3 4,769,623 + OH686_23540 0.48 +0.9 4,769,623 + OH686_23540 0.48 +1.9 4,769,623 + OH686_23540 0.48 -0.3 4,769,624 - OH686_23540 0.48 -0.3 4,769,624 - OH686_23540 0.48 +0.5 4,769,624 - OH686_23540 0.48 +0.6 4,769,624 - OH686_23540 0.48 +2.5 4,769,624 - OH686_23540 0.48 +0.1 4,769,624 - OH686_23540 0.48 +0.5 4,769,624 - OH686_23540 0.48 -0.1 4,769,624 - OH686_23540 0.48 -0.1 4,769,624 - OH686_23540 0.48 -0.3 4,769,624 - OH686_23540 0.48 -0.5 4,769,624 - OH686_23540 0.48 -0.3 4,769,624 - OH686_23540 0.48 +0.3 4,769,624 - OH686_23540 0.48 +0.8 4,769,624 - OH686_23540 0.48 +0.0 4,769,624 - OH686_23540 0.48 -1.4 4,769,624 - OH686_23540 0.48 -0.8 4,769,673 + OH686_23540 0.54 -0.7 4,769,673 + OH686_23540 0.54 +0.3 4,769,674 - OH686_23540 0.54 -0.4 4,769,707 + OH686_23540 0.58 +0.2 4,769,707 + OH686_23540 0.58 -0.3 4,769,707 + OH686_23540 0.58 +1.7 4,769,707 + OH686_23540 0.58 -1.3 4,769,707 + OH686_23540 0.58 +0.6 4,769,708 - OH686_23540 0.59 +0.4 4,769,708 - OH686_23540 0.59 -0.3 4,769,708 - OH686_23540 0.59 +0.0 4,769,717 - OH686_23540 0.60 +0.4 4,769,773 + OH686_23540 0.67 +0.4 4,769,784 + OH686_23540 0.68 +0.2 4,769,785 - OH686_23540 0.68 -0.0 4,769,785 - OH686_23540 0.68 +1.0 4,769,785 - OH686_23540 0.68 +0.3 4,769,822 - OH686_23540 0.73 +0.6 4,769,972 + -0.1 4,769,972 + -0.1 4,769,972 + +0.5 4,769,973 - +0.4 4,770,083 + -2.9 4,770,083 + -0.6 4,770,084 - +1.7 4,770,093 + -0.6 4,770,094 - +1.0 4,770,138 + -0.5 4,770,138 + +0.4 4,770,138 + -0.3 4,770,138 + -0.9 4,770,138 + +0.3 4,770,138 + +0.3 4,770,138 + +0.5 4,770,138 + -0.7 4,770,138 + -0.4 4,770,139 - +1.6 4,770,139 - -0.7 4,770,139 - -0.2 4,770,139 - +0.5 4,770,139 - +0.2 4,770,139 - -0.3 4,770,139 - -0.6 4,770,139 - -0.2 4,770,139 - -1.2 4,770,139 - -1.1 4,770,139 - +0.2 4,770,139 - -0.5 4,770,139 - +0.4 4,770,179 + -0.1 4,770,179 + +0.1 4,770,179 + -0.4 4,770,241 + OH686_23545 0.11 +0.9 4,770,241 + OH686_23545 0.11 +0.7 4,770,241 + OH686_23545 0.11 -0.9 4,770,574 + OH686_23545 0.46 +0.6 4,770,574 + OH686_23545 0.46 -0.2 4,770,574 + OH686_23545 0.46 +1.0 4,770,574 + OH686_23545 0.46 -0.6 4,770,574 + OH686_23545 0.46 -0.5 4,770,574 + OH686_23545 0.46 -0.9 4,770,574 + OH686_23545 0.46 -1.2 4,770,574 + OH686_23545 0.46 -0.0 4,770,575 - OH686_23545 0.46 -0.5 4,770,575 - OH686_23545 0.46 -0.1 4,770,575 - OH686_23545 0.46 -0.3 4,770,575 - OH686_23545 0.46 +0.2 4,770,575 - OH686_23545 0.46 -0.2 4,770,575 - OH686_23545 0.46 -0.2 4,770,787 + OH686_23545 0.68 +0.9 4,770,788 - OH686_23545 0.68 +1.0 4,770,872 + OH686_23545 0.77 -0.2 4,770,872 + OH686_23545 0.77 +0.2 4,770,873 - OH686_23545 0.77 +0.7 4,770,873 - OH686_23545 0.77 +0.8 4,771,110 + -0.3 4,771,110 + -0.9 4,771,111 - +0.6 4,771,111 - +0.1 4,771,111 - -0.4 4,771,337 - -1.6 4,771,337 - +1.0 4,771,377 + +0.2 4,771,377 + -0.9 4,771,377 + +0.3 4,771,377 + -0.3 4,771,377 + +1.1 4,771,377 + +0.6 4,771,377 + -1.6 4,771,377 + -0.8 4,771,377 + +0.3 4,771,378 - +0.1 4,771,378 - -0.0 4,771,378 - -0.4 4,771,378 - +0.3 4,771,378 - -1.0 4,771,378 - +0.3 4,771,378 - -0.0 4,771,378 - +1.8 4,771,378 - +1.2 4,771,378 - +0.1 4,771,378 - -0.3 4,771,378 - +0.6 4,771,978 + OH686_23550 0.20 -1.4 4,771,979 - OH686_23550 0.20 -0.1 4,771,979 - OH686_23550 0.20 +0.0
Or see this region's nucleotide sequence