Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_23205 and OH686_23210 are separated by 108 nucleotides OH686_23210 and OH686_23215 are separated by 87 nucleotides OH686_23215 and OH686_23220 are separated by 164 nucleotides OH686_23220 and OH686_23225 are separated by 136 nucleotides OH686_23225 and OH686_23230 are separated by 118 nucleotides
OH686_23205: OH686_23205 - hypothetical protein, at 4,701,815 to 4,702,615
_23205
OH686_23210: OH686_23210 - hypothetical protein, at 4,702,724 to 4,702,888
_23210
OH686_23215: OH686_23215 - hypothetical protein, at 4,702,976 to 4,703,296
_23215
OH686_23220: OH686_23220 - Alpha/beta hydrolase fold , at 4,703,461 to 4,704,429
_23220
OH686_23225: OH686_23225 - Acyl dehydratase, at 4,704,566 to 4,705,024
_23225
OH686_23230: OH686_23230 - hypothetical protein, at 4,705,143 to 4,705,640
_23230
Position (kb) 4703
4704
4705 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4702.610 kb on + strand at 4702.610 kb on + strand at 4702.610 kb on + strand at 4702.610 kb on + strand at 4702.610 kb on + strand at 4702.611 kb on - strand at 4702.611 kb on - strand at 4702.856 kb on - strand, within OH686_23210 at 4702.940 kb on + strand at 4702.940 kb on + strand at 4702.940 kb on + strand at 4702.940 kb on + strand at 4702.940 kb on + strand at 4702.941 kb on - strand at 4702.941 kb on - strand at 4702.941 kb on - strand at 4702.988 kb on + strand at 4702.988 kb on + strand at 4702.988 kb on + strand at 4702.988 kb on + strand at 4702.988 kb on + strand at 4702.988 kb on + strand at 4702.989 kb on - strand at 4702.989 kb on - strand at 4703.041 kb on + strand, within OH686_23215 at 4703.115 kb on + strand, within OH686_23215 at 4703.275 kb on - strand at 4703.275 kb on - strand at 4703.294 kb on + strand at 4703.294 kb on + strand at 4703.295 kb on - strand at 4703.295 kb on - strand at 4703.295 kb on - strand at 4703.306 kb on + strand at 4703.306 kb on + strand at 4703.306 kb on + strand at 4703.359 kb on - strand at 4703.359 kb on - strand at 4703.359 kb on - strand at 4703.421 kb on + strand at 4703.421 kb on + strand at 4703.421 kb on + strand at 4703.421 kb on + strand at 4703.421 kb on + strand at 4703.422 kb on - strand at 4703.422 kb on - strand at 4703.422 kb on - strand at 4703.422 kb on - strand at 4703.422 kb on - strand at 4703.425 kb on + strand at 4703.425 kb on + strand at 4703.426 kb on - strand at 4703.426 kb on - strand at 4703.537 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.557 kb on + strand at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.558 kb on - strand, within OH686_23220 at 4703.660 kb on - strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.662 kb on + strand, within OH686_23220 at 4703.663 kb on - strand, within OH686_23220 at 4703.663 kb on - strand, within OH686_23220 at 4703.663 kb on - strand, within OH686_23220 at 4703.663 kb on - strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.824 kb on + strand, within OH686_23220 at 4703.825 kb on - strand, within OH686_23220 at 4703.825 kb on - strand, within OH686_23220 at 4703.825 kb on - strand, within OH686_23220 at 4703.825 kb on - strand, within OH686_23220 at 4703.932 kb on + strand, within OH686_23220 at 4703.932 kb on + strand, within OH686_23220 at 4703.932 kb on + strand, within OH686_23220 at 4703.932 kb on + strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.933 kb on - strand, within OH686_23220 at 4703.934 kb on + strand, within OH686_23220 at 4703.935 kb on - strand, within OH686_23220 at 4704.016 kb on + strand, within OH686_23220 at 4704.016 kb on + strand, within OH686_23220 at 4704.016 kb on + strand, within OH686_23220 at 4704.016 kb on + strand, within OH686_23220 at 4704.016 kb on + strand, within OH686_23220 at 4704.017 kb on - strand, within OH686_23220 at 4704.017 kb on - strand, within OH686_23220 at 4704.017 kb on - strand, within OH686_23220 at 4704.017 kb on - strand, within OH686_23220 at 4704.017 kb on - strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.205 kb on + strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.206 kb on - strand, within OH686_23220 at 4704.287 kb on + strand, within OH686_23220 at 4704.287 kb on + strand, within OH686_23220 at 4704.288 kb on - strand, within OH686_23220 at 4704.439 kb on + strand at 4704.439 kb on + strand at 4704.533 kb on + strand at 4704.534 kb on - strand at 4704.574 kb on + strand at 4704.596 kb on + strand at 4704.597 kb on - strand at 4704.597 kb on - strand at 4704.597 kb on - strand at 4704.616 kb on - strand, within OH686_23225 at 4704.642 kb on - strand, within OH686_23225 at 4704.704 kb on - strand, within OH686_23225 at 4704.871 kb on + strand, within OH686_23225 at 4704.871 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.903 kb on + strand, within OH686_23225 at 4704.904 kb on - strand, within OH686_23225 at 4704.904 kb on - strand, within OH686_23225 at 4704.904 kb on - strand, within OH686_23225 at 4704.904 kb on - strand, within OH686_23225 at 4704.904 kb on - strand, within OH686_23225 at 4705.003 kb on - strand at 4705.021 kb on - strand at 4705.021 kb on - strand at 4705.022 kb on + strand at 4705.022 kb on + strand at 4705.022 kb on + strand at 4705.023 kb on - strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.079 kb on + strand at 4705.080 kb on - strand at 4705.080 kb on - strand at 4705.080 kb on - strand at 4705.118 kb on + strand at 4705.118 kb on + strand at 4705.118 kb on + strand at 4705.119 kb on - strand at 4705.119 kb on - strand at 4705.119 kb on - strand at 4705.119 kb on - strand at 4705.119 kb on - strand at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.234 kb on + strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.235 kb on - strand, within OH686_23230 at 4705.393 kb on + strand, within OH686_23230 at 4705.393 kb on + strand, within OH686_23230 at 4705.393 kb on + strand, within OH686_23230 at 4705.394 kb on - strand, within OH686_23230 at 4705.394 kb on - strand, within OH686_23230 at 4705.394 kb on - strand, within OH686_23230
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,702,610 + -0.7 4,702,610 + -0.7 4,702,610 + -0.5 4,702,610 + +1.0 4,702,610 + -0.0 4,702,611 - +0.8 4,702,611 - +0.4 4,702,856 - OH686_23210 0.80 +0.4 4,702,940 + +0.0 4,702,940 + -0.8 4,702,940 + -0.8 4,702,940 + -0.5 4,702,940 + +0.3 4,702,941 - +0.1 4,702,941 - +0.4 4,702,941 - -0.2 4,702,988 + -0.2 4,702,988 + -1.8 4,702,988 + -0.4 4,702,988 + +0.2 4,702,988 + -1.8 4,702,988 + -0.5 4,702,989 - +0.0 4,702,989 - -0.9 4,703,041 + OH686_23215 0.20 -0.7 4,703,115 + OH686_23215 0.43 +0.1 4,703,275 - +0.4 4,703,275 - -0.8 4,703,294 + +0.9 4,703,294 + -0.2 4,703,295 - -0.4 4,703,295 - -1.2 4,703,295 - +0.5 4,703,306 + +1.0 4,703,306 + -0.2 4,703,306 + +0.3 4,703,359 - +0.3 4,703,359 - -0.1 4,703,359 - +1.1 4,703,421 + +0.4 4,703,421 + +0.5 4,703,421 + -0.7 4,703,421 + +0.6 4,703,421 + -0.0 4,703,422 - -0.9 4,703,422 - -0.0 4,703,422 - -0.6 4,703,422 - -2.3 4,703,422 - +0.7 4,703,425 + +0.5 4,703,425 + -0.2 4,703,426 - -0.5 4,703,426 - -1.4 4,703,537 + +0.4 4,703,557 + -0.3 4,703,557 + -0.2 4,703,557 + +1.7 4,703,557 + -1.8 4,703,557 + -0.4 4,703,557 + -0.9 4,703,557 + +1.1 4,703,557 + +0.6 4,703,557 + -0.4 4,703,557 + -0.1 4,703,557 + +0.1 4,703,558 - OH686_23220 0.10 -1.2 4,703,558 - OH686_23220 0.10 -1.0 4,703,558 - OH686_23220 0.10 +0.3 4,703,558 - OH686_23220 0.10 +0.0 4,703,558 - OH686_23220 0.10 +0.6 4,703,558 - OH686_23220 0.10 +1.1 4,703,558 - OH686_23220 0.10 +0.1 4,703,558 - OH686_23220 0.10 -0.1 4,703,660 - OH686_23220 0.21 +0.6 4,703,662 + OH686_23220 0.21 -1.3 4,703,662 + OH686_23220 0.21 -1.1 4,703,662 + OH686_23220 0.21 -1.8 4,703,662 + OH686_23220 0.21 +0.3 4,703,662 + OH686_23220 0.21 -0.1 4,703,662 + OH686_23220 0.21 -0.3 4,703,663 - OH686_23220 0.21 +0.2 4,703,663 - OH686_23220 0.21 -0.2 4,703,663 - OH686_23220 0.21 +0.3 4,703,663 - OH686_23220 0.21 +0.8 4,703,824 + OH686_23220 0.37 +0.9 4,703,824 + OH686_23220 0.37 +0.7 4,703,824 + OH686_23220 0.37 +0.3 4,703,824 + OH686_23220 0.37 -0.1 4,703,824 + OH686_23220 0.37 -0.1 4,703,824 + OH686_23220 0.37 +0.4 4,703,824 + OH686_23220 0.37 -0.3 4,703,824 + OH686_23220 0.37 -0.3 4,703,824 + OH686_23220 0.37 -2.8 4,703,824 + OH686_23220 0.37 +0.2 4,703,824 + OH686_23220 0.37 +0.6 4,703,824 + OH686_23220 0.37 -0.6 4,703,824 + OH686_23220 0.37 +0.2 4,703,825 - OH686_23220 0.38 +0.2 4,703,825 - OH686_23220 0.38 +0.6 4,703,825 - OH686_23220 0.38 +0.5 4,703,825 - OH686_23220 0.38 -0.6 4,703,932 + OH686_23220 0.49 -0.5 4,703,932 + OH686_23220 0.49 -0.2 4,703,932 + OH686_23220 0.49 +0.1 4,703,932 + OH686_23220 0.49 +1.0 4,703,933 - OH686_23220 0.49 +2.0 4,703,933 - OH686_23220 0.49 -0.7 4,703,933 - OH686_23220 0.49 -0.6 4,703,933 - OH686_23220 0.49 -0.4 4,703,933 - OH686_23220 0.49 -0.7 4,703,933 - OH686_23220 0.49 -0.2 4,703,933 - OH686_23220 0.49 +0.4 4,703,933 - OH686_23220 0.49 +0.7 4,703,934 + OH686_23220 0.49 +0.1 4,703,935 - OH686_23220 0.49 -0.7 4,704,016 + OH686_23220 0.57 +0.0 4,704,016 + OH686_23220 0.57 +0.4 4,704,016 + OH686_23220 0.57 -0.4 4,704,016 + OH686_23220 0.57 -1.4 4,704,016 + OH686_23220 0.57 -0.4 4,704,017 - OH686_23220 0.57 -0.4 4,704,017 - OH686_23220 0.57 -0.5 4,704,017 - OH686_23220 0.57 +0.1 4,704,017 - OH686_23220 0.57 +0.2 4,704,017 - OH686_23220 0.57 +0.6 4,704,205 + OH686_23220 0.77 -1.8 4,704,205 + OH686_23220 0.77 -0.3 4,704,205 + OH686_23220 0.77 +0.9 4,704,205 + OH686_23220 0.77 +0.5 4,704,205 + OH686_23220 0.77 +0.5 4,704,205 + OH686_23220 0.77 +0.6 4,704,205 + OH686_23220 0.77 -0.2 4,704,205 + OH686_23220 0.77 +1.5 4,704,205 + OH686_23220 0.77 -0.8 4,704,205 + OH686_23220 0.77 +0.3 4,704,206 - OH686_23220 0.77 -0.6 4,704,206 - OH686_23220 0.77 -1.0 4,704,206 - OH686_23220 0.77 -0.8 4,704,206 - OH686_23220 0.77 -0.2 4,704,206 - OH686_23220 0.77 +0.8 4,704,206 - OH686_23220 0.77 -0.9 4,704,206 - OH686_23220 0.77 -0.4 4,704,287 + OH686_23220 0.85 -1.0 4,704,287 + OH686_23220 0.85 +0.2 4,704,288 - OH686_23220 0.85 +0.3 4,704,439 + +0.1 4,704,439 + -0.2 4,704,533 + -0.2 4,704,534 - +0.6 4,704,574 + +0.8 4,704,596 + +0.9 4,704,597 - +0.9 4,704,597 - +1.0 4,704,597 - -0.6 4,704,616 - OH686_23225 0.11 +0.5 4,704,642 - OH686_23225 0.17 -0.3 4,704,704 - OH686_23225 0.30 -1.9 4,704,871 + OH686_23225 0.66 +0.2 4,704,871 + OH686_23225 0.66 -0.6 4,704,903 + OH686_23225 0.73 -0.8 4,704,903 + OH686_23225 0.73 -0.2 4,704,903 + OH686_23225 0.73 +0.5 4,704,903 + OH686_23225 0.73 -0.3 4,704,903 + OH686_23225 0.73 -0.0 4,704,903 + OH686_23225 0.73 -0.7 4,704,903 + OH686_23225 0.73 +0.5 4,704,904 - OH686_23225 0.74 +1.1 4,704,904 - OH686_23225 0.74 +0.0 4,704,904 - OH686_23225 0.74 -0.6 4,704,904 - OH686_23225 0.74 +0.2 4,704,904 - OH686_23225 0.74 -1.1 4,705,003 - +0.5 4,705,021 - +0.0 4,705,021 - -0.1 4,705,022 + -0.2 4,705,022 + -0.1 4,705,022 + -0.8 4,705,023 - +1.4 4,705,079 + +0.6 4,705,079 + -0.0 4,705,079 + +0.7 4,705,079 + +1.2 4,705,079 + +0.4 4,705,079 + +0.6 4,705,079 + +0.2 4,705,080 - -1.3 4,705,080 - -0.5 4,705,080 - -0.2 4,705,118 + -0.1 4,705,118 + +0.7 4,705,118 + +0.9 4,705,119 - +0.1 4,705,119 - -0.1 4,705,119 - -0.1 4,705,119 - +0.6 4,705,119 - -0.5 4,705,234 + OH686_23230 0.18 +0.1 4,705,234 + OH686_23230 0.18 -0.2 4,705,234 + OH686_23230 0.18 +0.3 4,705,234 + OH686_23230 0.18 -0.8 4,705,234 + OH686_23230 0.18 +0.3 4,705,234 + OH686_23230 0.18 -0.3 4,705,234 + OH686_23230 0.18 +2.7 4,705,234 + OH686_23230 0.18 +0.4 4,705,234 + OH686_23230 0.18 +0.2 4,705,235 - OH686_23230 0.18 +0.3 4,705,235 - OH686_23230 0.18 +0.8 4,705,235 - OH686_23230 0.18 +0.4 4,705,235 - OH686_23230 0.18 +0.2 4,705,235 - OH686_23230 0.18 +1.2 4,705,235 - OH686_23230 0.18 +0.6 4,705,235 - OH686_23230 0.18 +0.4 4,705,235 - OH686_23230 0.18 -0.3 4,705,235 - OH686_23230 0.18 +0.4 4,705,393 + OH686_23230 0.50 +0.1 4,705,393 + OH686_23230 0.50 -1.0 4,705,393 + OH686_23230 0.50 -0.8 4,705,394 - OH686_23230 0.50 -0.9 4,705,394 - OH686_23230 0.50 -0.6 4,705,394 - OH686_23230 0.50 +0.3
Or see this region's nucleotide sequence