Strain Fitness in Pseudomonas sp. S08-1 around OH686_19195

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,958,269	+		OH686_19190	0.14	-1.6
3,958,269	+		OH686_19190	0.14	-1.8
3,958,269	+		OH686_19190	0.14	-2.4
3,958,269	+		OH686_19190	0.14	-1.1
3,958,269	+		OH686_19190	0.14	-2.3
3,958,269	+		OH686_19190	0.14	-1.8
3,958,269	+		OH686_19190	0.14	-1.4
3,958,269	+		OH686_19190	0.14	-0.6
3,958,269	+		OH686_19190	0.14	-4.1
3,958,270	-		OH686_19190	0.14	-2.2
3,958,270	-		OH686_19190	0.14	-1.6
3,958,270	-		OH686_19190	0.14	-2.2
3,958,270	-		OH686_19190	0.14	-3.4
3,958,270	-		OH686_19190	0.14	-1.8
3,958,270	-		OH686_19190	0.14	-0.6
3,958,270	-		OH686_19190	0.14	-2.1
3,958,272	+		OH686_19190	0.14	-1.7
3,958,272	+		OH686_19190	0.14	-1.2
3,958,272	+		OH686_19190	0.14	-3.0
3,958,272	+		OH686_19190	0.14	-0.9
3,958,273	-		OH686_19190	0.14	-1.0
3,958,273	-		OH686_19190	0.14	-1.4
3,958,273	-		OH686_19190	0.14	-2.4
3,958,273	-		OH686_19190	0.14	-0.7
3,958,490	-		OH686_19190	0.34	-2.0
3,958,490	-		OH686_19190	0.34	-1.3
3,958,490	-		OH686_19190	0.34	-3.3
3,958,542	+		OH686_19190	0.39	-1.2
3,958,542	+		OH686_19190	0.39	-1.7
3,958,542	+		OH686_19190	0.39	-2.1
3,958,542	+		OH686_19190	0.39	-2.1
3,958,542	+		OH686_19190	0.39	-0.7
3,958,542	+		OH686_19190	0.39	-2.5
3,958,542	+		OH686_19190	0.39	-3.0
3,958,542	+		OH686_19190	0.39	-1.6
3,958,542	+		OH686_19190	0.39	-2.6
3,958,542	+		OH686_19190	0.39	-1.2
3,958,542	+		OH686_19190	0.39	-1.4
3,958,542	+		OH686_19190	0.39	-0.4
3,958,542	+		OH686_19190	0.39	-0.8
3,958,543	-		OH686_19190	0.39	-3.0
3,958,543	-		OH686_19190	0.39	-2.4
3,958,543	-		OH686_19190	0.39	-0.2
3,958,677	+		OH686_19190	0.52	-0.4
3,958,677	+		OH686_19190	0.52	-1.4
3,958,677	+		OH686_19190	0.52	-1.1
3,958,678	-		OH686_19190	0.52	-3.7
3,958,678	-		OH686_19190	0.52	-1.6
3,958,678	-		OH686_19190	0.52	-1.6
3,958,678	-		OH686_19190	0.52	-1.2
3,958,779	+		OH686_19190	0.62	-2.9
3,958,929	+		OH686_19190	0.76	-2.4
3,958,929	+		OH686_19190	0.76	-1.5
3,958,929	+		OH686_19190	0.76	-1.2
3,958,929	+		OH686_19190	0.76	-2.7
3,958,930	-		OH686_19190	0.76	-0.1
3,958,930	-		OH686_19190	0.76	-2.4
3,958,930	-		OH686_19190	0.76	-2.2
3,958,930	-		OH686_19190	0.76	-2.2
3,958,930	-		OH686_19190	0.76	-2.6
3,958,930	-		OH686_19190	0.76	-0.9
3,958,930	-		OH686_19190	0.76	-0.5
3,958,930	-		OH686_19190	0.76	-0.4
3,958,930	-		OH686_19190	0.76	-2.1
3,959,037	-		OH686_19190	0.86	-2.9
3,959,037	-		OH686_19190	0.86	-2.9
3,959,037	-		OH686_19190	0.86	-3.4
3,959,127	-				-2.9
3,959,185	+				-0.3
3,959,186	-				-0.4
3,959,186	-				-0.0
3,959,358	+				+0.4
3,959,359	-				-1.1
3,959,371	+				-0.8
3,959,372	-				-0.2
3,959,372	-				+0.9
3,959,379	+				-1.3
3,959,459	-		OH686_19195	0.15	-0.2
3,959,459	-		OH686_19195	0.15	-0.7
3,959,572	+		OH686_19195	0.23	+0.0
3,959,573	-		OH686_19195	0.23	+1.6
3,959,573	-		OH686_19195	0.23	-1.0
3,959,668	+		OH686_19195	0.30	+0.3
3,959,668	+		OH686_19195	0.30	+1.9
3,959,668	+		OH686_19195	0.30	-0.7
3,959,669	-		OH686_19195	0.30	-0.5
3,959,669	-		OH686_19195	0.30	+1.2
3,959,669	-		OH686_19195	0.30	+1.1
3,959,695	-		OH686_19195	0.32	+0.0
3,959,875	+		OH686_19195	0.45	-1.1
3,959,993	-		OH686_19195	0.53	-0.1
3,960,156	-		OH686_19195	0.64	-2.4
3,960,156	-		OH686_19195	0.64	+1.2
3,960,311	-		OH686_19195	0.75	+0.0
3,960,311	-		OH686_19195	0.75	-1.3
3,960,311	-		OH686_19195	0.75	-0.1
3,960,360	+		OH686_19195	0.78	-0.9
3,960,361	-		OH686_19195	0.78	+0.3
3,960,457	+		OH686_19195	0.85	+1.7
3,960,458	-		OH686_19195	0.85	+0.7
3,960,475	+		OH686_19195	0.86	-1.1
3,960,475	+		OH686_19195	0.86	+0.9
3,960,475	+		OH686_19195	0.86	+1.1
3,960,475	+		OH686_19195	0.86	-2.6
3,960,475	+		OH686_19195	0.86	-1.0
3,960,475	+		OH686_19195	0.86	+0.3
3,960,476	-		OH686_19195	0.87	+0.3
3,960,476	-		OH686_19195	0.87	+0.7
3,960,476	-		OH686_19195	0.87	-0.4
3,960,476	-		OH686_19195	0.87	+1.4
3,960,476	-		OH686_19195	0.87	-0.3
3,960,476	-		OH686_19195	0.87	-1.1
3,960,476	-		OH686_19195	0.87	-0.7
3,960,697	+				+0.2
3,960,697	+				-2.4
3,960,698	-				-0.7
3,960,698	-				-0.3
3,960,698	-				+0.2
3,960,698	-				-0.1
3,960,698	-				+0.1
3,960,702	+				-0.2
3,960,702	+				+0.7
3,960,740	-				+0.3
3,961,097	+				+0.1
3,961,097	+				+0.2
3,961,098	-				-1.1
3,961,190	+		OH686_19205	0.27	-0.8
3,961,190	+		OH686_19205	0.27	+0.0
3,961,190	+		OH686_19205	0.27	-0.6
3,961,190	+		OH686_19205	0.27	+1.1
3,961,191	-		OH686_19205	0.27	+0.4
3,961,191	-		OH686_19205	0.27	-0.3
3,961,191	-		OH686_19205	0.27	+1.1
3,961,191	-		OH686_19205	0.27	-0.3
3,961,194	+		OH686_19205	0.27	-0.1
3,961,194	+		OH686_19205	0.27	+1.1
3,961,194	+		OH686_19205	0.27	-0.0
3,961,194	+		OH686_19205	0.27	+0.7
3,961,194	+		OH686_19205	0.27	-0.1
3,961,194	+		OH686_19205	0.27	-0.1
3,961,195	-		OH686_19205	0.28	-0.9
3,961,195	-		OH686_19205	0.28	-0.1
3,961,195	-		OH686_19205	0.28	-0.1
3,961,195	-		OH686_19205	0.28	-0.1
3,961,195	-		OH686_19205	0.28	-0.1
3,961,206	+		OH686_19205	0.30	-0.3
3,961,206	+		OH686_19205	0.30	-1.0
3,961,206	+		OH686_19205	0.30	-1.0
3,961,206	+		OH686_19205	0.30	+0.3
3,961,207	-		OH686_19205	0.30	+0.4
3,961,207	-		OH686_19205	0.30	+1.1
3,961,372	-		OH686_19205	0.65	-0.3
3,961,372	-		OH686_19205	0.65	-0.8
3,961,428	+		OH686_19205	0.77	+0.9
3,961,428	+		OH686_19205	0.77	-0.0
3,961,429	-		OH686_19205	0.77	+0.9
3,961,434	+		OH686_19205	0.78	-0.7
3,961,434	+		OH686_19205	0.78	+0.5
3,961,434	+		OH686_19205	0.78	+0.4
3,961,434	+		OH686_19205	0.78	+0.1
3,961,434	+		OH686_19205	0.78	+0.6
3,961,434	+		OH686_19205	0.78	-0.1
3,961,434	+		OH686_19205	0.78	+0.0
3,961,434	+		OH686_19205	0.78	+1.1
3,961,434	+		OH686_19205	0.78	+0.3
3,961,434	+		OH686_19205	0.78	+1.5
3,961,435	-		OH686_19205	0.78	+0.0
3,961,435	-		OH686_19205	0.78	-0.6
3,961,435	-		OH686_19205	0.78	+0.2
3,961,435	-		OH686_19205	0.78	+0.3
3,961,435	-		OH686_19205	0.78	-0.8
3,961,435	-		OH686_19205	0.78	+0.3
3,961,435	-		OH686_19205	0.78	-0.1
3,961,435	-		OH686_19205	0.78	-1.4
3,961,435	-		OH686_19205	0.78	-0.6
3,961,435	-		OH686_19205	0.78	+0.2
3,961,435	-		OH686_19205	0.78	-0.5
3,961,549	+				+0.6