Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_13695 and OH686_13700 are separated by 103 nucleotides OH686_13700 and OH686_13705 are separated by 120 nucleotides OH686_13705 and OH686_13710 are separated by 61 nucleotides
OH686_13695: OH686_13695 - alanine racemase, at 2,871,800 to 2,872,873
_13695
OH686_13700: OH686_13700 - Putrescine utilization regulator, at 2,872,977 to 2,873,525
_13700
OH686_13705: OH686_13705 - Cytochrome c5, at 2,873,646 to 2,874,068
_13705
OH686_13710: OH686_13710 - hypothetical protein, at 2,874,130 to 2,876,694
_13710
Position (kb)
2873
2874
2875 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2872.799 kb on + strand at 2872.859 kb on + strand at 2872.859 kb on + strand at 2872.859 kb on + strand at 2872.859 kb on + strand at 2872.860 kb on - strand at 2872.860 kb on - strand at 2872.860 kb on - strand at 2872.910 kb on + strand at 2872.910 kb on + strand at 2872.914 kb on + strand at 2872.947 kb on + strand at 2872.947 kb on + strand at 2872.947 kb on + strand at 2872.947 kb on + strand at 2872.947 kb on + strand at 2872.947 kb on + strand at 2872.948 kb on - strand at 2872.948 kb on - strand at 2872.948 kb on - strand at 2872.948 kb on - strand at 2872.948 kb on - strand at 2873.003 kb on + strand at 2873.004 kb on - strand at 2873.004 kb on - strand at 2873.004 kb on - strand at 2873.004 kb on - strand at 2873.171 kb on + strand, within OH686_13700 at 2873.172 kb on - strand, within OH686_13700 at 2873.304 kb on + strand, within OH686_13700 at 2873.304 kb on + strand, within OH686_13700 at 2873.304 kb on + strand, within OH686_13700 at 2873.305 kb on - strand, within OH686_13700 at 2873.305 kb on - strand, within OH686_13700 at 2873.407 kb on + strand, within OH686_13700 at 2873.407 kb on + strand, within OH686_13700 at 2873.407 kb on + strand, within OH686_13700 at 2873.407 kb on + strand, within OH686_13700 at 2873.407 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.433 kb on + strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.434 kb on - strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.436 kb on + strand, within OH686_13700 at 2873.437 kb on - strand, within OH686_13700 at 2873.437 kb on - strand, within OH686_13700 at 2873.437 kb on - strand, within OH686_13700 at 2873.437 kb on - strand, within OH686_13700 at 2873.516 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.523 kb on + strand at 2873.524 kb on - strand at 2873.524 kb on - strand at 2873.524 kb on - strand at 2873.524 kb on - strand at 2873.586 kb on + strand at 2873.586 kb on + strand at 2873.586 kb on + strand at 2873.587 kb on - strand at 2873.587 kb on - strand at 2873.587 kb on - strand at 2873.587 kb on - strand at 2873.587 kb on - strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.588 kb on + strand at 2873.589 kb on - strand at 2873.589 kb on - strand at 2873.589 kb on - strand at 2873.627 kb on + strand at 2873.627 kb on + strand at 2873.628 kb on - strand at 2874.066 kb on + strand at 2874.066 kb on + strand at 2874.066 kb on + strand at 2874.066 kb on + strand at 2874.066 kb on + strand at 2874.067 kb on - strand at 2874.067 kb on - strand at 2874.067 kb on - strand at 2874.067 kb on - strand at 2874.131 kb on + strand at 2874.131 kb on + strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.132 kb on - strand at 2874.151 kb on + strand at 2874.151 kb on + strand at 2874.151 kb on + strand at 2874.152 kb on - strand at 2874.152 kb on - strand at 2874.308 kb on + strand at 2874.309 kb on - strand at 2874.309 kb on - strand at 2874.309 kb on - strand at 2874.309 kb on - strand at 2874.309 kb on - strand at 2874.309 kb on - strand at 2874.347 kb on + strand at 2874.348 kb on - strand at 2874.348 kb on - strand at 2874.348 kb on - strand at 2874.390 kb on - strand, within OH686_13710 at 2874.422 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.452 kb on + strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.453 kb on - strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.455 kb on + strand, within OH686_13710 at 2874.456 kb on - strand, within OH686_13710 at 2874.456 kb on - strand, within OH686_13710 at 2874.456 kb on - strand, within OH686_13710 at 2874.456 kb on - strand, within OH686_13710 at 2874.456 kb on - strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.473 kb on + strand, within OH686_13710 at 2874.474 kb on - strand, within OH686_13710 at 2874.474 kb on - strand, within OH686_13710 at 2874.474 kb on - strand, within OH686_13710 at 2874.491 kb on + strand, within OH686_13710 at 2874.491 kb on + strand, within OH686_13710 at 2874.492 kb on - strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.551 kb on + strand, within OH686_13710 at 2874.552 kb on - strand, within OH686_13710 at 2874.552 kb on - strand, within OH686_13710 at 2874.552 kb on - strand, within OH686_13710 at 2874.552 kb on - strand, within OH686_13710 at 2874.662 kb on + strand, within OH686_13710 at 2874.662 kb on + strand, within OH686_13710 at 2874.662 kb on + strand, within OH686_13710 at 2874.662 kb on + strand, within OH686_13710 at 2874.663 kb on - strand, within OH686_13710 at 2874.663 kb on - strand, within OH686_13710 at 2874.663 kb on - strand, within OH686_13710 at 2874.663 kb on - strand, within OH686_13710 at 2874.710 kb on + strand, within OH686_13710 at 2874.717 kb on - strand, within OH686_13710 at 2874.770 kb on + strand, within OH686_13710 at 2874.770 kb on + strand, within OH686_13710 at 2874.770 kb on + strand, within OH686_13710 at 2874.770 kb on + strand, within OH686_13710 at 2874.771 kb on - strand, within OH686_13710 at 2874.771 kb on - strand, within OH686_13710 at 2874.771 kb on - strand, within OH686_13710 at 2874.771 kb on - strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.887 kb on + strand, within OH686_13710 at 2874.888 kb on - strand, within OH686_13710 at 2875.005 kb on - strand, within OH686_13710 at 2875.016 kb on - strand, within OH686_13710 at 2875.016 kb on - strand, within OH686_13710
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 2,872,799 + -0.2 2,872,859 + +0.6 2,872,859 + +0.2 2,872,859 + -0.2 2,872,859 + -0.0 2,872,860 - -0.2 2,872,860 - -0.0 2,872,860 - +0.5 2,872,910 + +1.0 2,872,910 + +1.3 2,872,914 + +0.6 2,872,947 + +0.4 2,872,947 + -2.7 2,872,947 + -0.7 2,872,947 + +0.6 2,872,947 + +1.0 2,872,947 + +0.8 2,872,948 - -0.2 2,872,948 - -0.4 2,872,948 - -0.6 2,872,948 - +0.4 2,872,948 - +0.0 2,873,003 + -2.2 2,873,004 - -0.3 2,873,004 - +0.6 2,873,004 - +1.2 2,873,004 - -1.7 2,873,171 + OH686_13700 0.35 +0.6 2,873,172 - OH686_13700 0.36 -0.7 2,873,304 + OH686_13700 0.60 -0.4 2,873,304 + OH686_13700 0.60 -0.2 2,873,304 + OH686_13700 0.60 +0.0 2,873,305 - OH686_13700 0.60 -1.0 2,873,305 - OH686_13700 0.60 +0.4 2,873,407 + OH686_13700 0.78 -0.1 2,873,407 + OH686_13700 0.78 +0.3 2,873,407 + OH686_13700 0.78 -0.4 2,873,407 + OH686_13700 0.78 -1.0 2,873,407 + OH686_13700 0.78 -0.7 2,873,433 + OH686_13700 0.83 -1.4 2,873,433 + OH686_13700 0.83 -0.3 2,873,433 + OH686_13700 0.83 +0.2 2,873,433 + OH686_13700 0.83 -2.2 2,873,433 + OH686_13700 0.83 -0.5 2,873,433 + OH686_13700 0.83 -0.8 2,873,433 + OH686_13700 0.83 +1.3 2,873,433 + OH686_13700 0.83 -1.1 2,873,433 + OH686_13700 0.83 -0.7 2,873,434 - OH686_13700 0.83 +0.6 2,873,434 - OH686_13700 0.83 -0.4 2,873,434 - OH686_13700 0.83 +0.4 2,873,434 - OH686_13700 0.83 -2.6 2,873,434 - OH686_13700 0.83 -0.7 2,873,434 - OH686_13700 0.83 -0.4 2,873,434 - OH686_13700 0.83 -0.7 2,873,434 - OH686_13700 0.83 +0.1 2,873,436 + OH686_13700 0.84 -0.7 2,873,436 + OH686_13700 0.84 +0.8 2,873,436 + OH686_13700 0.84 -0.5 2,873,436 + OH686_13700 0.84 +0.6 2,873,436 + OH686_13700 0.84 -1.2 2,873,436 + OH686_13700 0.84 -1.2 2,873,437 - OH686_13700 0.84 -1.6 2,873,437 - OH686_13700 0.84 +0.0 2,873,437 - OH686_13700 0.84 +0.0 2,873,437 - OH686_13700 0.84 +0.4 2,873,516 + -1.5 2,873,523 + +0.0 2,873,523 + +0.6 2,873,523 + +0.1 2,873,523 + -0.7 2,873,523 + +0.6 2,873,523 + -0.2 2,873,523 + +0.2 2,873,523 + +0.6 2,873,523 + -1.1 2,873,524 - +0.6 2,873,524 - -1.0 2,873,524 - +0.8 2,873,524 - -0.2 2,873,586 + -0.7 2,873,586 + -0.2 2,873,586 + +0.6 2,873,587 - +0.5 2,873,587 - +0.0 2,873,587 - +0.1 2,873,587 - +0.9 2,873,587 - -0.6 2,873,588 + -1.2 2,873,588 + +0.2 2,873,588 + -0.7 2,873,588 + -0.6 2,873,588 + +0.0 2,873,588 + -0.6 2,873,588 + +0.1 2,873,588 + +0.1 2,873,588 + -0.4 2,873,589 - +1.3 2,873,589 - -0.7 2,873,589 - -0.7 2,873,627 + -2.0 2,873,627 + +0.1 2,873,628 - +0.0 2,874,066 + -0.3 2,874,066 + +0.2 2,874,066 + -0.3 2,874,066 + +0.5 2,874,066 + -0.5 2,874,067 - -0.2 2,874,067 - -1.7 2,874,067 - +0.2 2,874,067 - +0.3 2,874,131 + -0.3 2,874,131 + -0.4 2,874,132 - +0.3 2,874,132 - -0.5 2,874,132 - -0.2 2,874,132 - +0.3 2,874,132 - +0.2 2,874,132 - -1.9 2,874,132 - -1.1 2,874,151 + -0.3 2,874,151 + -0.4 2,874,151 + -0.6 2,874,152 - +0.0 2,874,152 - -0.3 2,874,308 + +0.1 2,874,309 - -0.5 2,874,309 - -0.1 2,874,309 - -0.4 2,874,309 - +0.9 2,874,309 - +1.2 2,874,309 - +0.4 2,874,347 + -0.4 2,874,348 - -0.7 2,874,348 - -0.5 2,874,348 - -0.1 2,874,390 - OH686_13710 0.10 +0.6 2,874,422 + OH686_13710 0.11 -0.1 2,874,452 + OH686_13710 0.13 -0.5 2,874,452 + OH686_13710 0.13 -1.1 2,874,452 + OH686_13710 0.13 -0.5 2,874,452 + OH686_13710 0.13 -1.1 2,874,452 + OH686_13710 0.13 +0.3 2,874,452 + OH686_13710 0.13 +0.0 2,874,452 + OH686_13710 0.13 -0.4 2,874,452 + OH686_13710 0.13 -0.1 2,874,452 + OH686_13710 0.13 +0.0 2,874,453 - OH686_13710 0.13 -0.7 2,874,453 - OH686_13710 0.13 +1.2 2,874,453 - OH686_13710 0.13 +0.1 2,874,453 - OH686_13710 0.13 -0.4 2,874,453 - OH686_13710 0.13 -0.4 2,874,453 - OH686_13710 0.13 -0.0 2,874,453 - OH686_13710 0.13 +0.3 2,874,453 - OH686_13710 0.13 +0.2 2,874,453 - OH686_13710 0.13 -0.1 2,874,453 - OH686_13710 0.13 +0.2 2,874,455 + OH686_13710 0.13 -0.8 2,874,455 + OH686_13710 0.13 -0.4 2,874,455 + OH686_13710 0.13 -0.3 2,874,455 + OH686_13710 0.13 -0.3 2,874,455 + OH686_13710 0.13 -0.7 2,874,455 + OH686_13710 0.13 -0.1 2,874,456 - OH686_13710 0.13 +0.3 2,874,456 - OH686_13710 0.13 -1.5 2,874,456 - OH686_13710 0.13 -0.1 2,874,456 - OH686_13710 0.13 -0.3 2,874,456 - OH686_13710 0.13 +0.5 2,874,473 + OH686_13710 0.13 -0.1 2,874,473 + OH686_13710 0.13 +0.1 2,874,473 + OH686_13710 0.13 +0.5 2,874,473 + OH686_13710 0.13 -0.5 2,874,473 + OH686_13710 0.13 +0.1 2,874,473 + OH686_13710 0.13 -0.5 2,874,473 + OH686_13710 0.13 +0.6 2,874,473 + OH686_13710 0.13 -0.7 2,874,473 + OH686_13710 0.13 +0.8 2,874,474 - OH686_13710 0.13 +0.1 2,874,474 - OH686_13710 0.13 -0.1 2,874,474 - OH686_13710 0.13 -1.4 2,874,491 + OH686_13710 0.14 -0.1 2,874,491 + OH686_13710 0.14 -0.8 2,874,492 - OH686_13710 0.14 -0.3 2,874,551 + OH686_13710 0.16 -0.2 2,874,551 + OH686_13710 0.16 -0.5 2,874,551 + OH686_13710 0.16 +0.6 2,874,551 + OH686_13710 0.16 -0.5 2,874,551 + OH686_13710 0.16 +2.3 2,874,551 + OH686_13710 0.16 -1.4 2,874,551 + OH686_13710 0.16 -1.0 2,874,551 + OH686_13710 0.16 +0.4 2,874,551 + OH686_13710 0.16 -0.9 2,874,551 + OH686_13710 0.16 -0.2 2,874,551 + OH686_13710 0.16 +0.0 2,874,551 + OH686_13710 0.16 -0.7 2,874,551 + OH686_13710 0.16 -0.4 2,874,552 - OH686_13710 0.16 -0.0 2,874,552 - OH686_13710 0.16 +0.0 2,874,552 - OH686_13710 0.16 -1.0 2,874,552 - OH686_13710 0.16 +0.2 2,874,662 + OH686_13710 0.21 +0.4 2,874,662 + OH686_13710 0.21 +0.1 2,874,662 + OH686_13710 0.21 -1.4 2,874,662 + OH686_13710 0.21 +0.3 2,874,663 - OH686_13710 0.21 -0.8 2,874,663 - OH686_13710 0.21 -0.7 2,874,663 - OH686_13710 0.21 +1.1 2,874,663 - OH686_13710 0.21 -0.5 2,874,710 + OH686_13710 0.23 -0.2 2,874,717 - OH686_13710 0.23 +0.1 2,874,770 + OH686_13710 0.25 -0.1 2,874,770 + OH686_13710 0.25 +0.5 2,874,770 + OH686_13710 0.25 -0.7 2,874,770 + OH686_13710 0.25 +0.4 2,874,771 - OH686_13710 0.25 -1.2 2,874,771 - OH686_13710 0.25 +0.7 2,874,771 - OH686_13710 0.25 +0.8 2,874,771 - OH686_13710 0.25 -0.1 2,874,887 + OH686_13710 0.30 -0.9 2,874,887 + OH686_13710 0.30 -0.1 2,874,887 + OH686_13710 0.30 -0.3 2,874,887 + OH686_13710 0.30 +0.4 2,874,887 + OH686_13710 0.30 -0.8 2,874,887 + OH686_13710 0.30 -1.2 2,874,888 - OH686_13710 0.30 +0.7 2,875,005 - OH686_13710 0.34 -0.8 2,875,016 - OH686_13710 0.35 +0.1 2,875,016 - OH686_13710 0.35 +0.7
Or see this region's nucleotide sequence