Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_07825 and OH686_07830 are separated by 49 nucleotides OH686_07830 and OH686_07835 are separated by 16 nucleotides OH686_07835 and OH686_07840 are separated by 234 nucleotides
OH686_07825: OH686_07825 - valine--tRNA ligase, at 1,600,295 to 1,603,126
_07825
OH686_07830: OH686_07830 - hypothetical protein, at 1,603,176 to 1,603,634
_07830
OH686_07835: OH686_07835 - hypothetical protein, at 1,603,651 to 1,603,947
_07835
OH686_07840: OH686_07840 - COG1683: Uncharacterized conserved protein /Hypothetical protein YbgA, at 1,604,182 to 1,605,132
_07840
Position (kb)
1603
1604 Strain fitness (log2 ratio)
-2
-1
0
1 at 1603.124 kb on + strand at 1603.125 kb on - strand at 1603.125 kb on - strand at 1603.125 kb on - strand at 1603.125 kb on - strand at 1603.125 kb on - strand at 1603.693 kb on + strand, within OH686_07835 at 1603.693 kb on + strand, within OH686_07835 at 1603.693 kb on + strand, within OH686_07835 at 1603.693 kb on + strand, within OH686_07835 at 1603.693 kb on + strand, within OH686_07835 at 1603.694 kb on - strand, within OH686_07835 at 1603.694 kb on - strand, within OH686_07835 at 1603.694 kb on - strand, within OH686_07835 at 1603.861 kb on + strand, within OH686_07835 at 1603.861 kb on + strand, within OH686_07835 at 1603.861 kb on + strand, within OH686_07835 at 1603.861 kb on + strand, within OH686_07835 at 1603.862 kb on - strand, within OH686_07835 at 1603.862 kb on - strand, within OH686_07835 at 1603.862 kb on - strand, within OH686_07835 at 1603.868 kb on + strand, within OH686_07835 at 1604.021 kb on + strand at 1604.022 kb on - strand at 1604.022 kb on - strand at 1604.042 kb on - strand at 1604.051 kb on + strand at 1604.066 kb on + strand at 1604.066 kb on + strand at 1604.067 kb on - strand at 1604.067 kb on - strand at 1604.067 kb on - strand at 1604.067 kb on - strand at 1604.067 kb on - strand at 1604.107 kb on - strand at 1604.139 kb on + strand at 1604.140 kb on - strand at 1604.140 kb on - strand at 1604.140 kb on - strand at 1604.158 kb on - strand at 1604.239 kb on + strand at 1604.239 kb on + strand at 1604.239 kb on + strand at 1604.239 kb on + strand at 1604.239 kb on + strand at 1604.240 kb on - strand at 1604.240 kb on - strand at 1604.240 kb on - strand at 1604.531 kb on - strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.755 kb on + strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.756 kb on - strand, within OH686_07840 at 1604.852 kb on - strand, within OH686_07840
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 1,603,124 + -0.5 1,603,125 - -1.7 1,603,125 - -0.2 1,603,125 - -0.7 1,603,125 - -0.4 1,603,125 - -1.7 1,603,693 + OH686_07835 0.14 +0.1 1,603,693 + OH686_07835 0.14 +0.0 1,603,693 + OH686_07835 0.14 +1.4 1,603,693 + OH686_07835 0.14 +0.5 1,603,693 + OH686_07835 0.14 -0.5 1,603,694 - OH686_07835 0.14 -0.6 1,603,694 - OH686_07835 0.14 +1.0 1,603,694 - OH686_07835 0.14 +0.2 1,603,861 + OH686_07835 0.71 -0.1 1,603,861 + OH686_07835 0.71 +0.5 1,603,861 + OH686_07835 0.71 -1.4 1,603,861 + OH686_07835 0.71 +0.1 1,603,862 - OH686_07835 0.71 -0.5 1,603,862 - OH686_07835 0.71 -0.4 1,603,862 - OH686_07835 0.71 -0.3 1,603,868 + OH686_07835 0.73 -0.4 1,604,021 + -0.8 1,604,022 - -0.4 1,604,022 - -0.4 1,604,042 - -0.2 1,604,051 + -0.0 1,604,066 + +0.2 1,604,066 + -0.2 1,604,067 - -0.6 1,604,067 - -0.6 1,604,067 - -0.0 1,604,067 - +0.1 1,604,067 - +0.6 1,604,107 - +0.7 1,604,139 + -0.5 1,604,140 - -0.6 1,604,140 - -0.4 1,604,140 - -0.7 1,604,158 - +0.5 1,604,239 + +0.0 1,604,239 + -0.5 1,604,239 + -1.3 1,604,239 + +0.3 1,604,239 + -0.1 1,604,240 - -1.8 1,604,240 - -0.0 1,604,240 - -1.7 1,604,531 - OH686_07840 0.37 -0.2 1,604,755 + OH686_07840 0.60 -0.5 1,604,755 + OH686_07840 0.60 -0.2 1,604,755 + OH686_07840 0.60 -0.1 1,604,755 + OH686_07840 0.60 +0.1 1,604,755 + OH686_07840 0.60 -0.2 1,604,755 + OH686_07840 0.60 -0.4 1,604,756 - OH686_07840 0.60 -0.4 1,604,756 - OH686_07840 0.60 -0.2 1,604,756 - OH686_07840 0.60 -0.4 1,604,756 - OH686_07840 0.60 +0.1 1,604,756 - OH686_07840 0.60 +1.1 1,604,756 - OH686_07840 0.60 -0.5 1,604,756 - OH686_07840 0.60 -0.5 1,604,756 - OH686_07840 0.60 -0.2 1,604,756 - OH686_07840 0.60 +1.3 1,604,756 - OH686_07840 0.60 +0.2 1,604,756 - OH686_07840 0.60 -0.6 1,604,756 - OH686_07840 0.60 -0.3 1,604,756 - OH686_07840 0.60 -0.5 1,604,852 - OH686_07840 0.70 -0.1
Or see this region's nucleotide sequence