Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4259

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
5,111,934	+		Echvi_4258	0.76	-0.5
5,111,935	-		Echvi_4258	0.76	-0.1
5,112,011	+		Echvi_4258	0.78	-2.5
5,112,012	-		Echvi_4258	0.78	-0.4
5,112,040	+		Echvi_4258	0.79	+0.3
5,112,040	+		Echvi_4258	0.79	-0.6
5,112,093	-		Echvi_4258	0.81	+1.2
5,112,134	-		Echvi_4258	0.82	-0.9
5,112,208	+		Echvi_4258	0.85	+0.2
5,112,209	-		Echvi_4258	0.85	+0.1
5,112,227	+		Echvi_4258	0.85	+1.1
5,112,238	+		Echvi_4258	0.86	+0.1
5,112,421	+				-0.6
5,112,422	-				-0.2
5,112,422	-				-2.3
5,112,422	-				-0.3
5,112,431	-				-0.3
5,112,471	+				-0.8
5,112,474	+				-0.2
5,112,475	-				-0.6
5,112,475	-				+0.3
5,112,624	-				+0.0
5,112,659	+				-0.2
5,112,659	+				-1.7
5,112,659	+				+1.0
5,112,660	-				-2.2
5,112,660	-				-1.0
5,112,660	-				-0.5
5,112,661	+				-1.2
5,112,661	+				+0.0
5,112,662	-				-0.4
5,112,662	-				-1.4
5,112,662	-				+1.2
5,112,717	+				+1.1
5,112,717	+				-0.8
5,112,748	-				-0.2
5,112,812	+				+0.2
5,112,832	+				+0.0
5,112,878	+				-0.5
5,112,880	+				+0.4
5,112,881	-				-0.9
5,112,881	-				+0.0
5,112,881	-				+0.2
5,112,935	+				+0.1
5,112,940	+				+0.3
5,112,940	+				-0.4
5,112,941	-				-0.2
5,113,068	+				-0.5
5,113,069	-				-1.5
5,113,112	-				+2.1
5,113,191	+				+0.0
5,113,205	+				+0.7
5,113,353	-		Echvi_4259	0.12	-0.2
5,113,358	-		Echvi_4259	0.12	+0.0
5,113,358	-		Echvi_4259	0.12	+0.8
5,113,393	-		Echvi_4259	0.13	-0.2
5,113,393	-		Echvi_4259	0.13	-0.3
5,113,433	+		Echvi_4259	0.14	-0.5
5,113,436	-		Echvi_4259	0.14	+0.3
5,113,436	-		Echvi_4259	0.14	-1.4
5,113,576	-		Echvi_4259	0.18	-0.1
5,113,608	-		Echvi_4259	0.19	-2.9
5,113,608	-		Echvi_4259	0.19	+0.2
5,113,609	+		Echvi_4259	0.19	+0.3
5,113,609	+		Echvi_4259	0.19	-0.2
5,113,609	+		Echvi_4259	0.19	-0.3
5,113,610	-		Echvi_4259	0.19	-0.8
5,113,724	+		Echvi_4259	0.21	-0.5
5,113,830	-		Echvi_4259	0.24	+1.4
5,113,906	+		Echvi_4259	0.26	+1.4
5,113,955	-		Echvi_4259	0.27	-0.5
5,114,024	+		Echvi_4259	0.29	-0.5
5,114,025	-		Echvi_4259	0.29	+0.4
5,114,101	-		Echvi_4259	0.31	+1.3
5,114,219	+		Echvi_4259	0.33	+0.5
5,114,219	+		Echvi_4259	0.33	-2.0
5,114,257	-		Echvi_4259	0.34	-0.8
5,114,316	+		Echvi_4259	0.36	-0.6
5,114,325	+		Echvi_4259	0.36	-1.5
5,114,326	-		Echvi_4259	0.36	-1.8
5,114,342	+		Echvi_4259	0.36	+0.6
5,114,343	-		Echvi_4259	0.37	+0.0
5,114,345	-		Echvi_4259	0.37	-0.2
5,114,389	+		Echvi_4259	0.38	+1.0
5,114,389	+		Echvi_4259	0.38	-0.1
5,114,451	-		Echvi_4259	0.39	+0.4
5,114,527	+		Echvi_4259	0.41	+0.5
5,114,554	+		Echvi_4259	0.42	-0.5
5,114,554	+		Echvi_4259	0.42	+1.1
5,114,555	-		Echvi_4259	0.42	-0.1
5,114,595	-		Echvi_4259	0.43	-1.2
5,114,595	-		Echvi_4259	0.43	-0.3
5,114,596	+		Echvi_4259	0.43	-0.4
5,114,596	+		Echvi_4259	0.43	+0.0
5,114,596	+		Echvi_4259	0.43	-1.7
5,114,596	+		Echvi_4259	0.43	+1.2
5,114,597	-		Echvi_4259	0.43	-1.4
5,114,597	-		Echvi_4259	0.43	-0.0
5,114,597	-		Echvi_4259	0.43	-0.6
5,114,708	+		Echvi_4259	0.45	-0.2
5,114,709	-		Echvi_4259	0.45	-1.3
5,114,709	-		Echvi_4259	0.45	+1.1
5,114,709	-		Echvi_4259	0.45	+0.1
5,114,710	+		Echvi_4259	0.46	-1.3
5,114,710	+		Echvi_4259	0.46	-2.2
5,114,710	+		Echvi_4259	0.46	-0.9
5,114,710	+		Echvi_4259	0.46	+0.1
5,114,710	+		Echvi_4259	0.46	+2.2
5,114,710	+		Echvi_4259	0.46	-0.1
5,114,711	-		Echvi_4259	0.46	+0.3
5,114,794	+		Echvi_4259	0.48	-0.9
5,114,795	-		Echvi_4259	0.48	-0.3
5,114,800	+		Echvi_4259	0.48	+0.4
5,114,800	+		Echvi_4259	0.48	+0.7
5,114,800	+		Echvi_4259	0.48	-0.7
5,114,800	+		Echvi_4259	0.48	-0.5
5,114,800	+		Echvi_4259	0.48	-1.7
5,114,800	+		Echvi_4259	0.48	-1.4
5,114,801	-		Echvi_4259	0.48	+0.8
5,114,801	-		Echvi_4259	0.48	-0.0
5,114,801	-		Echvi_4259	0.48	-1.6
5,114,805	+		Echvi_4259	0.48	+0.6
5,114,805	+		Echvi_4259	0.48	+0.4
5,114,805	+		Echvi_4259	0.48	+0.3
5,114,805	+		Echvi_4259	0.48	+1.8
5,114,806	-		Echvi_4259	0.48	+0.0
5,114,806	-		Echvi_4259	0.48	-0.0
5,114,825	-		Echvi_4259	0.48	-0.4
5,114,895	+		Echvi_4259	0.50	-0.7
5,114,994	+		Echvi_4259	0.52	+0.0
5,114,995	-		Echvi_4259	0.52	-1.8
5,114,995	-		Echvi_4259	0.52	-1.0
5,114,995	-		Echvi_4259	0.52	-0.6
5,115,011	+		Echvi_4259	0.53	-0.0
5,115,061	+		Echvi_4259	0.54	-0.8
5,115,062	-		Echvi_4259	0.54	-1.5
5,115,149	-		Echvi_4259	0.56	+0.4
5,115,339	+		Echvi_4259	0.61	-0.3
5,115,339	+		Echvi_4259	0.61	+0.2
5,115,339	+		Echvi_4259	0.61	+1.0
5,115,340	-		Echvi_4259	0.61	-0.0
5,115,340	-		Echvi_4259	0.61	+1.9
5,115,451	+				-0.2
5,115,452	-		Echvi_4259	0.64	+0.7
5,115,452	-		Echvi_4259	0.64	+0.5
5,115,452	-		Echvi_4259	0.64	-0.2
5,115,453	+		Echvi_4259	0.64	-1.2
5,115,454	-		Echvi_4259	0.64	-0.5
5,115,570	-		Echvi_4259	0.67	-0.1
5,115,571	+		Echvi_4259	0.67	-0.4
5,115,571	+		Echvi_4259	0.67	+0.2
5,115,572	-		Echvi_4259	0.67	+2.3
5,115,607	+		Echvi_4259	0.67	-0.2
5,115,658	+		Echvi_4259	0.69	+1.4
5,115,658	+		Echvi_4259	0.69	-0.4
5,115,658	+		Echvi_4259	0.69	-0.6
5,115,658	+		Echvi_4259	0.69	-0.6
5,115,658	+		Echvi_4259	0.69	-0.2
5,115,659	-		Echvi_4259	0.69	+0.8
5,115,659	-		Echvi_4259	0.69	+0.8
5,115,659	-		Echvi_4259	0.69	+0.0
5,115,662	+		Echvi_4259	0.69	-0.1
5,115,662	+		Echvi_4259	0.69	+0.8
5,115,662	+		Echvi_4259	0.69	+0.5
5,115,662	+		Echvi_4259	0.69	-0.6
5,115,662	+		Echvi_4259	0.69	-0.3
5,115,662	+		Echvi_4259	0.69	+0.6
5,115,663	-		Echvi_4259	0.69	-0.4
5,115,663	-		Echvi_4259	0.69	-0.1
5,115,663	-		Echvi_4259	0.69	-0.5
5,115,663	-		Echvi_4259	0.69	-0.7
5,115,757	+		Echvi_4259	0.71	-3.4
5,115,757	+		Echvi_4259	0.71	+1.0
5,115,846	+		Echvi_4259	0.73	-0.2
5,115,849	-		Echvi_4259	0.73	-1.0
5,115,878	+		Echvi_4259	0.74	-0.4
5,115,990	+		Echvi_4259	0.77	-2.8
5,115,991	-		Echvi_4259	0.77	-0.4
5,116,098	+		Echvi_4259	0.80	+0.1
5,116,162	+		Echvi_4259	0.81	-1.0
5,116,168	+		Echvi_4259	0.81	+0.8
5,116,207	+		Echvi_4259	0.82	+0.8
5,116,267	-		Echvi_4259	0.84	+0.5
5,116,275	+		Echvi_4259	0.84	-1.1
5,116,286	+		Echvi_4259	0.84	+0.6
5,116,334	+		Echvi_4259	0.85	+1.7
5,116,390	+		Echvi_4259	0.87	-1.3
5,116,390	+		Echvi_4259	0.87	+0.1
5,116,390	+		Echvi_4259	0.87	-0.2
5,116,391	-		Echvi_4259	0.87	-2.6
5,116,524	+		Echvi_4259	0.90	-0.5
5,116,558	+				+1.2
5,116,561	+				+0.5
5,116,588	+				+0.5
5,116,594	+				-1.4
5,116,596	+				-0.0
5,116,597	-				-0.3
5,116,627	-				+0.9
5,116,627	-				+0.1
5,116,650	-				+0.2
5,116,744	+				+0.5
5,116,745	-				+0.6
5,116,745	-				-1.1
5,116,745	-				+0.5
5,116,745	-				+0.6
5,116,772	+				+0.7
5,116,826	+				+0.0
5,116,826	+				-0.6
5,116,829	-				-0.0
5,116,936	+				+0.8
5,116,943	+				-0.7
5,116,943	+				-1.4
5,116,944	-				+0.4
5,117,154	+		Echvi_4260	0.33	-0.9
5,117,154	+		Echvi_4260	0.33	-1.1
5,117,155	-		Echvi_4260	0.33	+0.5
5,117,155	-		Echvi_4260	0.33	-0.3
5,117,156	+		Echvi_4260	0.34	-0.0
5,117,157	-		Echvi_4260	0.34	-0.2
5,117,174	+		Echvi_4260	0.41	-0.8
5,117,181	+		Echvi_4260	0.44	-1.8
5,117,181	+		Echvi_4260	0.44	-2.3
5,117,204	+		Echvi_4260	0.53	-2.8
5,117,205	-		Echvi_4260	0.54	+0.1
5,117,205	-		Echvi_4260	0.54	-0.4
5,117,217	+		Echvi_4260	0.59	-0.8
5,117,428	-		Echvi_4261	0.49	-1.8
5,117,473	-		Echvi_4261	0.64	+0.2
5,117,577	+				-4.0
5,117,578	-				+0.9
5,117,609	+				-0.2
5,117,613	+				+0.0
5,117,614	-				-0.7