Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3930

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
4,704,292	+		Echvi_3928	0.87	+1.3
4,704,340	-				-0.2
4,704,340	-				-0.7
4,704,379	+				-0.6
4,704,380	-				+1.0
4,704,384	+				-1.0
4,704,454	+				+0.2
4,704,455	-				-1.4
4,704,455	-				-0.2
4,704,473	+				-0.1
4,704,474	-				-0.7
4,704,477	-				+0.5
4,704,494	-				-0.2
4,704,494	-				+1.5
4,704,554	+		Echvi_3929	0.12	+1.6
4,704,557	+		Echvi_3929	0.13	-0.2
4,704,558	-		Echvi_3929	0.13	-0.1
4,704,568	+		Echvi_3929	0.15	-0.4
4,704,568	+		Echvi_3929	0.15	-1.2
4,704,569	-		Echvi_3929	0.15	-0.7
4,704,615	-		Echvi_3929	0.23	-1.2
4,704,615	-		Echvi_3929	0.23	+0.8
4,704,666	-		Echvi_3929	0.32	+0.3
4,704,667	+		Echvi_3929	0.32	-0.3
4,704,667	+		Echvi_3929	0.32	+0.5
4,704,667	+		Echvi_3929	0.32	+0.2
4,704,667	+		Echvi_3929	0.32	+0.0
4,704,667	+		Echvi_3929	0.32	+0.1
4,704,667	+		Echvi_3929	0.32	+1.0
4,704,667	+		Echvi_3929	0.32	-0.3
4,704,668	-		Echvi_3929	0.32	-1.4
4,704,668	-		Echvi_3929	0.32	+0.2
4,704,668	-		Echvi_3929	0.32	-0.7
4,704,668	-		Echvi_3929	0.32	-0.1
4,704,668	-		Echvi_3929	0.32	+0.0
4,704,893	+		Echvi_3929	0.71	+1.3
4,704,897	+		Echvi_3929	0.71	-0.2
4,704,901	+		Echvi_3929	0.72	+0.1
4,704,901	+		Echvi_3929	0.72	-0.7
4,704,974	+		Echvi_3929	0.85	-2.0
4,704,975	-		Echvi_3929	0.85	-0.1
4,704,976	+		Echvi_3929	0.85	+1.1
4,704,976	+		Echvi_3929	0.85	+0.1
4,704,985	-		Echvi_3929	0.86	-0.2
4,705,035	+				-1.3
4,705,036	-				+0.4
4,705,083	+				-0.7
4,705,084	-				+2.1
4,705,087	+				-0.2
4,705,088	-				-0.7
4,705,088	-				+0.7
4,705,090	+				-1.4
4,705,090	+				+0.7
4,705,091	-				+0.8
4,705,113	-				-0.3
4,705,135	-				-0.6
4,705,156	-				-0.7
4,705,359	+		Echvi_3930	0.14	+1.3
4,705,359	+		Echvi_3930	0.14	+0.3
4,705,359	+		Echvi_3930	0.14	+1.2
4,705,359	+		Echvi_3930	0.14	+0.8
4,705,359	+		Echvi_3930	0.14	+0.6
4,705,359	+		Echvi_3930	0.14	-1.3
4,705,359	+		Echvi_3930	0.14	+0.2
4,705,359	+		Echvi_3930	0.14	+0.4
4,705,359	+		Echvi_3930	0.14	+0.6
4,705,360	-		Echvi_3930	0.14	+0.5
4,705,360	-		Echvi_3930	0.14	-0.5
4,705,360	-		Echvi_3930	0.14	+0.9
4,705,360	-		Echvi_3930	0.14	-1.2
4,705,360	-		Echvi_3930	0.14	+0.9
4,705,360	-		Echvi_3930	0.14	+0.5
4,705,360	-		Echvi_3930	0.14	-0.4
4,705,360	-		Echvi_3930	0.14	+1.2
4,705,360	-		Echvi_3930	0.14	-1.6
4,705,438	+		Echvi_3930	0.20	-0.5
4,705,438	+		Echvi_3930	0.20	+1.1
4,705,438	+		Echvi_3930	0.20	-1.5
4,705,438	+		Echvi_3930	0.20	+0.2
4,705,438	+		Echvi_3930	0.20	+0.5
4,705,439	-		Echvi_3930	0.20	+1.0
4,705,439	-		Echvi_3930	0.20	+0.3
4,705,505	+		Echvi_3930	0.24	-1.3
4,705,525	+		Echvi_3930	0.26	+0.6
4,705,525	+		Echvi_3930	0.26	-0.1
4,705,525	+		Echvi_3930	0.26	-3.6
4,705,525	+		Echvi_3930	0.26	+0.1
4,705,525	+		Echvi_3930	0.26	+0.5
4,705,526	-		Echvi_3930	0.26	+0.5
4,705,526	-		Echvi_3930	0.26	-1.2
4,705,526	-		Echvi_3930	0.26	+1.5
4,705,526	-		Echvi_3930	0.26	-0.6
4,705,529	+		Echvi_3930	0.26	+0.3
4,705,529	+		Echvi_3930	0.26	-0.5
4,705,529	+		Echvi_3930	0.26	-1.2
4,705,530	-		Echvi_3930	0.26	-0.0
4,705,530	-		Echvi_3930	0.26	-0.1
4,705,685	+		Echvi_3930	0.37	+0.3
4,705,685	+		Echvi_3930	0.37	+0.3
4,705,686	-		Echvi_3930	0.37	+0.1
4,705,689	-		Echvi_3930	0.37	-1.2
4,705,689	-		Echvi_3930	0.37	-0.2
4,705,689	-		Echvi_3930	0.37	+1.0
4,705,689	-		Echvi_3930	0.37	+0.2
4,705,689	-		Echvi_3930	0.37	-0.3
4,705,691	-		Echvi_3930	0.37	-0.0
4,705,691	-		Echvi_3930	0.37	-1.7
4,705,717	+		Echvi_3930	0.39	-2.0
4,705,718	-		Echvi_3930	0.39	-1.5
4,705,793	+		Echvi_3930	0.44	-0.8
4,705,793	+		Echvi_3930	0.44	-0.2
4,705,795	+		Echvi_3930	0.44	-1.1
4,705,796	-		Echvi_3930	0.44	-0.4
4,705,796	-		Echvi_3930	0.44	+1.3
4,705,876	+		Echvi_3930	0.50	+0.2
4,705,961	-		Echvi_3930	0.55	-0.4
4,705,993	+		Echvi_3930	0.58	+0.3
4,705,993	+		Echvi_3930	0.58	+0.9
4,706,041	+		Echvi_3930	0.61	-1.4
4,706,042	-		Echvi_3930	0.61	-0.7
4,706,059	+		Echvi_3930	0.62	+1.2
4,706,059	+		Echvi_3930	0.62	+0.2
4,706,060	-		Echvi_3930	0.62	-1.6
4,706,060	-		Echvi_3930	0.62	-0.5
4,706,060	-		Echvi_3930	0.62	-0.5
4,706,060	-		Echvi_3930	0.62	-1.4
4,706,060	-		Echvi_3930	0.62	-1.0
4,706,060	-		Echvi_3930	0.62	+0.1
4,706,062	+		Echvi_3930	0.62	-1.2
4,706,062	+		Echvi_3930	0.62	-0.3
4,706,062	+		Echvi_3930	0.62	+0.9
4,706,062	+		Echvi_3930	0.62	-0.2
4,706,062	+		Echvi_3930	0.62	+1.5
4,706,062	+		Echvi_3930	0.62	+0.6
4,706,062	+		Echvi_3930	0.62	+0.1
4,706,063	-		Echvi_3930	0.62	+1.6
4,706,063	-		Echvi_3930	0.62	-0.3
4,706,102	+		Echvi_3930	0.65	+1.0
4,706,227	+		Echvi_3930	0.73	+0.3
4,706,228	-		Echvi_3930	0.74	+0.8
4,706,228	-		Echvi_3930	0.74	+0.1
4,706,308	+		Echvi_3930	0.79	-0.7
4,706,308	+		Echvi_3930	0.79	+0.7
4,706,311	+		Echvi_3930	0.79	+0.4
4,706,330	-		Echvi_3930	0.81	+0.5
4,706,352	+		Echvi_3930	0.82	+0.9
4,706,352	+		Echvi_3930	0.82	+3.5
4,706,352	+		Echvi_3930	0.82	+0.3
4,706,425	+		Echvi_3930	0.87	+0.4
4,706,425	+		Echvi_3930	0.87	+0.9
4,706,425	+		Echvi_3930	0.87	+0.3
4,706,548	+				+0.5
4,706,577	+				+0.1
4,706,577	+				-0.7
4,706,629	+				-0.0
4,706,632	+				-0.7
4,706,642	+				+0.1
4,706,679	+				+0.3
4,706,679	+				+0.6
4,706,680	-				+0.0
4,706,907	-				+0.6
4,707,056	+		Echvi_3931	0.18	-0.8
4,707,056	+		Echvi_3931	0.18	+0.0
4,707,056	+		Echvi_3931	0.18	+0.6
4,707,056	+		Echvi_3931	0.18	-0.5
4,707,057	-		Echvi_3931	0.18	+0.8
4,707,057	-		Echvi_3931	0.18	+0.5
4,707,064	-		Echvi_3931	0.19	+0.1
4,707,289	-		Echvi_3931	0.39	+0.4
4,707,368	+		Echvi_3931	0.46	+0.5
4,707,369	-		Echvi_3931	0.46	+0.8
4,707,397	+		Echvi_3931	0.49	+2.4
4,707,459	+		Echvi_3931	0.54	+2.3
4,707,506	-		Echvi_3931	0.58	-2.1
4,707,591	+		Echvi_3931	0.66	-0.2
4,707,591	+		Echvi_3931	0.66	+2.3
4,707,592	-		Echvi_3931	0.66	-0.1