Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3647

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
4,332,381	+		Echvi_3645	0.70	-1.4
4,332,382	-		Echvi_3645	0.70	-2.2
4,332,418	+		Echvi_3645	0.72	+0.6
4,332,447	+		Echvi_3645	0.73	-0.0
4,332,448	-		Echvi_3645	0.73	+0.1
4,332,451	+		Echvi_3645	0.74	+0.3
4,332,452	-		Echvi_3645	0.74	+0.3
4,332,466	-		Echvi_3645	0.74	+0.0
4,332,466	-		Echvi_3645	0.74	-0.3
4,332,550	-		Echvi_3645	0.79	+0.4
4,332,604	+		Echvi_3645	0.82	-3.5
4,332,605	-		Echvi_3645	0.83	-1.4
4,332,605	-		Echvi_3645	0.83	-0.1
4,332,676	+		Echvi_3645	0.87	-1.4
4,332,695	-		Echvi_3645	0.88	+0.0
4,332,741	+				+0.1
4,332,761	+				-1.0
4,332,762	-				-0.9
4,332,786	+				+0.0
4,332,874	+				-1.1
4,332,902	+				-0.2
4,332,904	+				-0.0
4,332,904	+				+0.6
4,332,905	-				+0.0
4,332,905	-				-1.1
4,332,905	-				-1.7
4,332,909	-		Echvi_3646	0.46	-0.8
4,332,913	+		Echvi_3646	0.47	-1.0
4,332,914	-		Echvi_3646	0.47	-1.1
4,332,917	-		Echvi_3646	0.48	-2.0
4,332,926	+		Echvi_3646	0.50	+0.2
4,332,929	+		Echvi_3646	0.51	-0.6
4,332,929	+		Echvi_3646	0.51	-0.4
4,332,930	-		Echvi_3646	0.51	+1.2
4,332,930	-		Echvi_3646	0.51	+0.7
4,332,932	+		Echvi_3646	0.52	-0.4
4,332,932	+		Echvi_3646	0.52	-0.3
4,332,932	+		Echvi_3646	0.52	+0.0
4,332,933	-		Echvi_3646	0.52	-0.0
4,332,933	-		Echvi_3646	0.52	-0.3
4,332,933	-		Echvi_3646	0.52	+0.6
4,332,935	+		Echvi_3646	0.53	+0.5
4,332,935	+		Echvi_3646	0.53	-2.0
4,332,935	+		Echvi_3646	0.53	+0.4
4,332,935	+		Echvi_3646	0.53	+0.5
4,332,935	+		Echvi_3646	0.53	+1.9
4,332,935	+		Echvi_3646	0.53	-0.3
4,332,936	-		Echvi_3646	0.53	-0.6
4,332,936	-		Echvi_3646	0.53	-1.0
4,332,936	-		Echvi_3646	0.53	-0.4
4,332,936	-		Echvi_3646	0.53	-1.2
4,332,936	-		Echvi_3646	0.53	+0.3
4,332,992	-		Echvi_3646	0.68	-1.5
4,333,093	+				+0.3
4,333,155	+				-0.5
4,333,155	+				-1.8
4,333,168	+				+1.4
4,333,224	+				-2.1
4,333,225	-				-0.7
4,333,225	-				-1.5
4,333,235	+				+0.6
4,333,244	+				-1.1
4,333,278	+				+0.1
4,333,278	+				+0.8
4,333,278	+				+0.2
4,333,279	-				+0.4
4,333,344	-		Echvi_3647	0.13	-0.1
4,333,344	-		Echvi_3647	0.13	-0.9
4,333,344	-		Echvi_3647	0.13	-0.6
4,333,376	+		Echvi_3647	0.18	+0.6
4,333,377	-		Echvi_3647	0.18	+0.8
4,333,403	-		Echvi_3647	0.22	+0.2
4,333,403	-		Echvi_3647	0.22	+0.5
4,333,433	-		Echvi_3647	0.27	-0.0
4,333,461	+		Echvi_3647	0.32	+0.2
4,333,488	+		Echvi_3647	0.36	-0.3
4,333,488	+		Echvi_3647	0.36	+1.0
4,333,489	-		Echvi_3647	0.36	-1.3
4,333,489	-		Echvi_3647	0.36	-0.2
4,333,502	-		Echvi_3647	0.38	+2.0
4,333,516	+		Echvi_3647	0.40	-0.0
4,333,517	-		Echvi_3647	0.40	+0.2
4,333,551	-		Echvi_3647	0.46	+0.8
4,333,551	-		Echvi_3647	0.46	-0.1
4,333,703	+		Echvi_3647	0.70	-0.0
4,333,703	+		Echvi_3647	0.70	+0.0
4,333,703	+		Echvi_3647	0.70	+0.8
4,333,706	+		Echvi_3647	0.70	+0.3
4,333,733	+		Echvi_3647	0.75	+0.5
4,333,733	+		Echvi_3647	0.75	-0.1
4,333,733	+		Echvi_3647	0.75	+0.1
4,333,734	-		Echvi_3647	0.75	-0.2
4,333,734	-		Echvi_3647	0.75	+0.3
4,333,746	-		Echvi_3647	0.77	+0.4
4,333,775	+		Echvi_3647	0.81	-0.1
4,333,777	+		Echvi_3647	0.82	+0.8
4,333,807	+		Echvi_3647	0.87	+0.0
4,333,808	-		Echvi_3647	0.87	-1.3
4,333,810	+		Echvi_3647	0.87	+0.2
4,333,810	+		Echvi_3647	0.87	+0.6
4,333,810	+		Echvi_3647	0.87	+0.1
4,333,811	-		Echvi_3647	0.87	+0.4
4,333,813	+		Echvi_3647	0.87	+0.2
4,333,825	-		Echvi_3647	0.89	+0.1
4,333,840	+				-1.7
4,333,841	-				+0.2
4,333,877	+				-0.5
4,333,877	+				+0.5
4,333,877	+				-0.3
4,333,877	+				-0.3
4,333,878	-				-0.3
4,333,878	-				+0.3
4,333,878	-				+1.0
4,333,878	-				+0.1
4,333,878	-				-0.7
4,333,878	-				-0.9
4,333,878	-				-0.5
4,333,879	+				+0.7
4,333,880	-				+0.3
4,333,883	+				+0.9
4,333,947	-				+2.2
4,333,956	-				-0.2
4,333,964	+				-1.3
4,333,968	+				-0.1
4,333,974	+				-2.4
4,333,987	+				-1.2
4,334,123	+				-2.5
4,334,124	-				-0.2
4,334,130	+				+0.6
4,334,130	+				+0.7
4,334,131	-				-0.6
4,334,131	-				+1.9
4,334,131	-				+0.1
4,334,131	-				+0.4
4,334,136	+				+0.7
4,334,137	-				-1.3
4,334,137	-				-0.3
4,334,144	+				+0.7
4,334,213	-				-2.8
4,334,230	+				+0.4
4,334,233	+				+1.2
4,334,233	+				-0.4
4,334,240	-				+1.2
4,334,288	-		Echvi_3648	0.15	-0.1
4,334,295	+		Echvi_3648	0.21	-0.1
4,334,300	+		Echvi_3648	0.25	-0.8
4,334,321	+		Echvi_3648	0.41	+0.0
4,334,376	+		Echvi_3648	0.85	+0.1
4,334,377	-		Echvi_3648	0.86	+1.8
4,334,420	-				-0.1
4,334,420	-				+2.2
4,334,420	-				+0.1
4,334,420	-				-0.1
4,334,461	+				-0.9
4,334,491	-				-1.4
4,334,491	-				-0.3
4,334,491	-				+0.0
4,334,503	+				-0.8
4,334,503	+				+0.3
4,334,503	+				+0.2
4,334,504	-				+0.2
4,334,504	-				-1.2
4,334,504	-				+0.4
4,334,507	+				-1.0
4,334,530	-				-0.7
4,334,533	-				+0.5
4,334,533	-				+0.2
4,334,533	-				-1.1
4,334,537	+				-0.8
4,334,537	+				+0.9
4,334,537	+				+1.1
4,334,537	+				-0.7
4,334,537	+				-1.2
4,334,538	-				-0.0
4,334,538	-				-2.5
4,334,538	-				-0.1
4,334,540	+				-0.6
4,334,541	-				+0.1
4,334,541	-				-0.0
4,334,541	-				+0.2
4,334,541	-				-0.6
4,334,541	-				-0.5
4,334,543	-				+0.6
4,334,543	-				+0.2
4,334,546	+				+0.7
4,334,547	-				-1.4
4,334,549	+				-0.4
4,334,550	-				-1.0
4,334,550	-				-0.7
4,334,602	-				-1.6
4,334,604	+				+0.1
4,334,655	+				+1.8
4,334,665	+				-2.1
4,334,725	-				+0.2
4,334,814	-				-0.6
4,334,814	-				+0.9
4,334,817	+				+0.9
4,334,817	+				-1.8
4,334,818	-				+0.1
4,334,818	-				+0.3
4,334,818	-				-1.6
4,334,821	-				+0.1
4,334,821	-				-0.9
4,334,822	+				-0.4
4,334,822	+				-1.3
4,334,858	+				-0.8
4,334,860	+				+0.2
4,334,860	+				+0.1
4,334,860	+				+0.4
4,334,861	-				-1.5
4,334,861	-				-0.4
4,334,871	+				-1.3
4,334,882	+				+0.5
4,334,882	+				-0.8
4,334,882	+				+0.3
4,334,883	-				+0.0