Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2970

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
3,547,266	-		Echvi_2969	0.37	-0.3
3,547,301	+		Echvi_2969	0.39	-0.3
3,547,301	+		Echvi_2969	0.39	+0.4
3,547,345	+		Echvi_2969	0.42	-0.3
3,547,346	-		Echvi_2969	0.42	+0.1
3,547,348	-		Echvi_2969	0.42	-0.5
3,547,348	-		Echvi_2969	0.42	-0.6
3,547,355	+		Echvi_2969	0.43	+2.7
3,547,356	-		Echvi_2969	0.43	+1.2
3,547,356	-		Echvi_2969	0.43	+0.0
3,547,356	-		Echvi_2969	0.43	+0.5
3,547,356	-		Echvi_2969	0.43	+1.1
3,547,370	-		Echvi_2969	0.44	+0.9
3,547,400	+		Echvi_2969	0.46	+1.9
3,547,413	-		Echvi_2969	0.47	+0.2
3,547,505	-		Echvi_2969	0.53	-0.1
3,547,525	+		Echvi_2969	0.54	-0.1
3,547,550	-		Echvi_2969	0.56	-0.6
3,547,550	-		Echvi_2969	0.56	+0.4
3,547,550	-		Echvi_2969	0.56	-1.0
3,547,559	+		Echvi_2969	0.56	+0.4
3,547,559	+		Echvi_2969	0.56	-0.8
3,547,563	-		Echvi_2969	0.56	-0.2
3,547,603	+		Echvi_2969	0.59	-1.5
3,547,632	+		Echvi_2969	0.61	+0.9
3,547,637	-		Echvi_2969	0.61	+0.8
3,547,664	+		Echvi_2969	0.63	-1.1
3,547,722	-		Echvi_2969	0.67	+0.3
3,547,727	-		Echvi_2969	0.67	-1.8
3,547,824	+		Echvi_2969	0.74	+0.6
3,547,897	+		Echvi_2969	0.78	+0.8
3,547,900	-		Echvi_2969	0.79	-0.5
3,547,918	-		Echvi_2969	0.80	-0.3
3,547,957	+		Echvi_2969	0.82	-0.6
3,547,957	+		Echvi_2969	0.82	+0.5
3,547,986	-		Echvi_2969	0.84	+1.3
3,547,986	-		Echvi_2969	0.84	+0.9
3,548,042	+		Echvi_2969	0.88	-0.9
3,548,042	+		Echvi_2969	0.88	+0.8
3,548,052	-		Echvi_2969	0.89	+0.9
3,548,052	-		Echvi_2969	0.89	+1.0
3,548,089	+				-1.1
3,548,090	-				+0.1
3,548,118	+				+0.9
3,548,118	+				-0.1
3,548,118	+				-0.3
3,548,119	-				+0.6
3,548,119	-				-0.2
3,548,119	-				-0.8
3,548,132	-				-1.9
3,548,132	-				+0.1
3,548,213	+				+0.0
3,548,226	-				-0.3
3,548,226	-				-0.6
3,548,298	+				+0.2
3,548,298	+				-0.0
3,548,299	-				-0.4
3,548,303	-				+1.9
3,548,321	+				+0.8
3,548,321	+				+0.3
3,548,356	-				-0.8
3,548,356	-				-0.0
3,548,356	-				-2.4
3,548,388	+				-0.4
3,548,449	+		Echvi_2970	0.13	-1.1
3,548,470	-		Echvi_2970	0.15	+0.2
3,548,475	+		Echvi_2970	0.15	+0.4
3,548,511	+		Echvi_2970	0.17	+1.1
3,548,511	+		Echvi_2970	0.17	-0.3
3,548,511	+		Echvi_2970	0.17	-1.5
3,548,512	-		Echvi_2970	0.17	+2.7
3,548,512	-		Echvi_2970	0.17	+0.3
3,548,513	+		Echvi_2970	0.17	-1.1
3,548,530	+		Echvi_2970	0.18	-0.8
3,548,531	-		Echvi_2970	0.19	-0.4
3,548,535	-		Echvi_2970	0.19	+0.9
3,548,535	-		Echvi_2970	0.19	-0.7
3,548,546	+		Echvi_2970	0.19	+0.3
3,548,576	+		Echvi_2970	0.21	+2.0
3,548,684	+		Echvi_2970	0.28	-0.4
3,548,685	-		Echvi_2970	0.28	+0.5
3,548,726	+		Echvi_2970	0.31	-0.4
3,548,829	-		Echvi_2970	0.37	+2.6
3,548,829	-		Echvi_2970	0.37	+0.6
3,548,849	+		Echvi_2970	0.39	+0.8
3,548,850	-		Echvi_2970	0.39	-0.4
3,548,850	-		Echvi_2970	0.39	-0.4
3,548,850	-		Echvi_2970	0.39	+1.0
3,548,897	+		Echvi_2970	0.42	-0.6
3,548,898	-		Echvi_2970	0.42	-0.2
3,548,899	+		Echvi_2970	0.42	-1.6
3,548,899	+		Echvi_2970	0.42	-0.8
3,548,901	+		Echvi_2970	0.42	+0.2
3,548,902	-		Echvi_2970	0.42	+0.6
3,548,944	+		Echvi_2970	0.45	-0.2
3,548,996	+		Echvi_2970	0.48	+0.2
3,548,997	-		Echvi_2970	0.48	+2.1
3,549,039	+		Echvi_2970	0.51	-0.2
3,549,039	+		Echvi_2970	0.51	+0.6
3,549,040	-		Echvi_2970	0.51	+0.4
3,549,040	-		Echvi_2970	0.51	+0.5
3,549,107	+		Echvi_2970	0.55	-0.3
3,549,110	+		Echvi_2970	0.55	-1.0
3,549,129	-		Echvi_2970	0.56	+0.5
3,549,164	+		Echvi_2970	0.59	-0.4
3,549,201	+		Echvi_2970	0.61	-0.2
3,549,316	-		Echvi_2970	0.68	+0.6
3,549,316	-		Echvi_2970	0.68	-0.7
3,549,320	+		Echvi_2970	0.68	+1.1
3,549,320	+		Echvi_2970	0.68	+0.7
3,549,320	+		Echvi_2970	0.68	+2.5
3,549,341	+		Echvi_2970	0.70	-0.1
3,549,342	-		Echvi_2970	0.70	+0.3
3,549,345	-		Echvi_2970	0.70	+0.3
3,549,352	-		Echvi_2970	0.70	-2.4
3,549,387	+		Echvi_2970	0.73	-1.5
3,549,388	-		Echvi_2970	0.73	+0.0
3,549,393	+		Echvi_2970	0.73	+0.3
3,549,398	+		Echvi_2970	0.73	-1.5
3,549,468	+		Echvi_2970	0.78	-0.8
3,549,583	-		Echvi_2970	0.85	-2.0
3,549,632	+		Echvi_2970	0.88	+0.5
3,549,729	-				+1.0
3,549,789	-				-0.4
3,549,789	-				+0.1
3,549,819	-				+1.2
3,549,854	-				-0.3
3,549,900	+				-0.0
3,549,915	+				-0.0
3,549,918	+				-0.5
3,549,919	-				-0.5
3,549,920	+				-0.5
3,549,920	+				-0.5
3,550,010	-				-2.5
3,550,020	-				-1.2
3,550,061	+				-1.0
3,550,066	+				+0.5
3,550,091	+				-1.0
3,550,117	+				-0.4
3,550,123	-				+0.2
3,550,127	+				-1.4
3,550,254	+				-0.4
3,550,254	+				+0.7
3,550,269	+		Echvi_2971	0.11	+0.6
3,550,269	+		Echvi_2971	0.11	-1.3
3,550,270	-		Echvi_2971	0.11	+0.8
3,550,270	-		Echvi_2971	0.11	-0.0
3,550,344	-		Echvi_2971	0.17	-1.6
3,550,373	+		Echvi_2971	0.19	+0.9
3,550,384	-		Echvi_2971	0.20	+0.4
3,550,394	-		Echvi_2971	0.21	+0.9
3,550,395	+		Echvi_2971	0.21	-0.5
3,550,396	-		Echvi_2971	0.21	+1.3
3,550,433	-		Echvi_2971	0.24	+0.4
3,550,436	+		Echvi_2971	0.24	-0.8
3,550,459	+		Echvi_2971	0.26	-2.4
3,550,469	-		Echvi_2971	0.27	-0.2
3,550,492	+		Echvi_2971	0.29	-0.2
3,550,509	-		Echvi_2971	0.30	+0.5
3,550,547	-		Echvi_2971	0.33	-0.4
3,550,655	-		Echvi_2971	0.42	-0.0
3,550,666	+		Echvi_2971	0.43	-1.0
3,550,681	+		Echvi_2971	0.44	-3.1
3,550,681	+		Echvi_2971	0.44	-1.3
3,550,682	-		Echvi_2971	0.44	+1.3
3,550,682	-		Echvi_2971	0.44	+0.8
3,550,685	+		Echvi_2971	0.44	-1.1
3,550,685	+		Echvi_2971	0.44	+0.2
3,550,685	+		Echvi_2971	0.44	+1.4
3,550,685	+		Echvi_2971	0.44	+1.5
3,550,685	+		Echvi_2971	0.44	-0.1
3,550,685	+		Echvi_2971	0.44	+1.8
3,550,686	-		Echvi_2971	0.45	+0.1
3,550,686	-		Echvi_2971	0.45	+0.3
3,550,686	-		Echvi_2971	0.45	-0.1
3,550,686	-		Echvi_2971	0.45	+0.4
3,550,686	-		Echvi_2971	0.45	+0.3
3,550,686	-		Echvi_2971	0.45	-0.9
3,550,687	+		Echvi_2971	0.45	-1.6
3,550,687	+		Echvi_2971	0.45	-0.8
3,550,687	+		Echvi_2971	0.45	+0.6
3,550,688	-		Echvi_2971	0.45	+0.9
3,550,689	+		Echvi_2971	0.45	-1.9
3,550,710	+		Echvi_2971	0.47	-0.1
3,550,710	+		Echvi_2971	0.47	+0.7
3,550,715	-		Echvi_2971	0.47	+2.5
3,550,721	+		Echvi_2971	0.47	-0.1
3,550,722	-		Echvi_2971	0.48	-0.4
3,550,741	+		Echvi_2971	0.49	+0.7
3,550,741	+		Echvi_2971	0.49	-1.2
3,550,742	-		Echvi_2971	0.49	+0.4
3,550,750	+		Echvi_2971	0.50	+1.1
3,550,782	-		Echvi_2971	0.52	+0.2