Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2824

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
3,379,012	+		Echvi_2823	0.22	-1.1
3,379,012	+		Echvi_2823	0.22	+1.2
3,379,013	-		Echvi_2823	0.22	+1.0
3,379,013	-		Echvi_2823	0.22	+0.7
3,379,013	-		Echvi_2823	0.22	+0.8
3,379,013	-		Echvi_2823	0.22	-0.2
3,379,026	-		Echvi_2823	0.23	+0.8
3,379,059	-		Echvi_2823	0.26	+0.0
3,379,092	-		Echvi_2823	0.28	+1.9
3,379,105	-		Echvi_2823	0.29	+0.7
3,379,105	-		Echvi_2823	0.29	+1.7
3,379,106	+		Echvi_2823	0.29	+3.0
3,379,106	+		Echvi_2823	0.29	+2.2
3,379,300	-		Echvi_2823	0.45	+1.6
3,379,306	+		Echvi_2823	0.45	+1.7
3,379,391	-		Echvi_2823	0.52	+1.2
3,379,424	+		Echvi_2823	0.54	+1.0
3,379,425	-		Echvi_2823	0.55	-0.9
3,379,456	+		Echvi_2823	0.57	+0.6
3,379,457	-		Echvi_2823	0.57	+1.2
3,379,504	+		Echvi_2823	0.61	+0.5
3,379,557	+		Echvi_2823	0.65	+0.4
3,379,557	+		Echvi_2823	0.65	+1.7
3,379,558	-		Echvi_2823	0.65	+1.0
3,379,560	+		Echvi_2823	0.65	+2.5
3,379,561	-		Echvi_2823	0.65	+0.5
3,379,612	+		Echvi_2823	0.69	-0.9
3,379,613	-		Echvi_2823	0.69	+1.2
3,379,613	-		Echvi_2823	0.69	+0.7
3,379,635	+		Echvi_2823	0.71	+1.5
3,379,635	+		Echvi_2823	0.71	+0.6
3,379,635	+		Echvi_2823	0.71	+0.9
3,379,635	+		Echvi_2823	0.71	+1.0
3,379,636	-		Echvi_2823	0.71	+1.3
3,379,636	-		Echvi_2823	0.71	+2.7
3,379,730	+		Echvi_2823	0.78	+1.5
3,379,731	-		Echvi_2823	0.79	-0.6
3,379,731	-		Echvi_2823	0.79	+1.6
3,379,768	-		Echvi_2823	0.81	+0.7
3,379,832	-		Echvi_2823	0.86	-0.8
3,379,901	+				+1.1
3,379,903	+				+0.8
3,379,982	-				+1.4
3,380,005	+				+2.1
3,380,005	+				+0.3
3,380,005	+				+1.4
3,380,016	-				+1.7
3,380,018	+				+0.2
3,380,018	+				+0.5
3,380,019	-				+1.4
3,380,019	-				+0.3
3,380,019	-				-1.2
3,380,019	-				+0.4
3,380,020	+				-1.0
3,380,021	-				-1.7
3,380,021	-				-3.9
3,380,037	+				-0.3
3,380,037	+				-0.3
3,380,037	+				-0.7
3,380,038	-				-0.9
3,380,038	-				-1.7
3,380,038	-				-0.9
3,380,038	-				-1.0
3,380,080	+				-1.2
3,380,080	+				-2.1
3,380,080	+				-0.9
3,380,081	-				-2.4
3,380,081	-				-2.4
3,380,134	+		Echvi_2824	0.11	+0.6
3,380,134	+		Echvi_2824	0.11	-1.2
3,380,135	-		Echvi_2824	0.11	-1.9
3,380,170	+		Echvi_2824	0.14	-1.3
3,380,171	-		Echvi_2824	0.14	-1.7
3,380,171	-		Echvi_2824	0.14	-1.4
3,380,171	-		Echvi_2824	0.14	-2.0
3,380,200	+		Echvi_2824	0.16	-1.5
3,380,201	-		Echvi_2824	0.16	-1.5
3,380,382	-		Echvi_2824	0.31	-0.6
3,380,386	+		Echvi_2824	0.31	-1.5
3,380,386	+		Echvi_2824	0.31	-1.8
3,380,386	+		Echvi_2824	0.31	-0.7
3,380,387	-		Echvi_2824	0.31	-1.8
3,380,409	+		Echvi_2824	0.33	-0.2
3,380,409	+		Echvi_2824	0.33	-0.4
3,380,410	-		Echvi_2824	0.33	-3.0
3,380,500	+		Echvi_2824	0.41	-0.9
3,380,500	+		Echvi_2824	0.41	+0.2
3,380,500	+		Echvi_2824	0.41	-0.3
3,380,500	+		Echvi_2824	0.41	-0.6
3,380,500	+		Echvi_2824	0.41	-1.5
3,380,501	-		Echvi_2824	0.41	+2.0
3,380,501	-		Echvi_2824	0.41	-1.6
3,380,522	+		Echvi_2824	0.43	-1.0
3,380,522	+		Echvi_2824	0.43	-2.1
3,380,523	-		Echvi_2824	0.43	-1.6
3,380,523	-		Echvi_2824	0.43	-0.8
3,380,523	-		Echvi_2824	0.43	-1.0
3,380,524	+		Echvi_2824	0.43	+0.1
3,380,525	-		Echvi_2824	0.43	-1.5
3,380,525	-		Echvi_2824	0.43	-2.2
3,380,543	+		Echvi_2824	0.44	-1.5
3,380,544	-		Echvi_2824	0.44	-2.1
3,380,553	-		Echvi_2824	0.45	-2.2
3,380,620	-		Echvi_2824	0.51	-2.6
3,380,631	+		Echvi_2824	0.51	-0.6
3,380,631	+		Echvi_2824	0.51	-1.0
3,380,737	-		Echvi_2824	0.60	-1.4
3,380,749	+		Echvi_2824	0.61	+0.1
3,380,780	+		Echvi_2824	0.64	+1.5
3,380,792	+		Echvi_2824	0.65	-1.5
3,380,834	+		Echvi_2824	0.68	-1.0
3,380,835	-		Echvi_2824	0.68	-2.0
3,380,850	+		Echvi_2824	0.69	-1.3
3,380,882	+		Echvi_2824	0.72	+0.4
3,380,882	+		Echvi_2824	0.72	-0.3
3,380,882	+		Echvi_2824	0.72	-1.1
3,380,882	+		Echvi_2824	0.72	+0.6
3,380,882	+		Echvi_2824	0.72	-1.6
3,380,884	+		Echvi_2824	0.72	-0.5
3,380,885	-		Echvi_2824	0.72	-1.2
3,380,901	+		Echvi_2824	0.74	-2.7
3,380,902	-		Echvi_2824	0.74	-2.0
3,380,942	-		Echvi_2824	0.77	-2.0
3,381,180	+				-0.8
3,381,180	+				-0.5
3,381,189	-				+0.3
3,381,202	+				-1.8
3,381,226	+				-0.7
3,381,227	-				+0.0
3,381,227	-				+0.2
3,381,227	-				+0.1
3,381,227	-				+0.6
3,381,230	+				-0.3
3,381,292	+				+0.6
3,381,292	+				+0.4
3,381,292	+				-0.3
3,381,293	-				-0.9
3,381,293	-				+0.1
3,381,294	+				+0.2
3,381,294	+				+0.8
3,381,394	-				-0.6
3,381,416	-				-1.5
3,381,437	+				-0.2
3,381,464	+				-0.1
3,381,505	+				+0.7
3,381,523	+				-0.2
3,381,596	+		Echvi_2825	0.12	-0.3
3,381,596	+		Echvi_2825	0.12	-1.1
3,381,649	+		Echvi_2825	0.13	+0.5
3,381,650	-		Echvi_2825	0.13	+0.7
3,381,650	-		Echvi_2825	0.13	+0.8
3,381,650	-		Echvi_2825	0.13	-0.5
3,381,660	+		Echvi_2825	0.13	-1.1
3,381,660	+		Echvi_2825	0.13	+0.7
3,381,665	-		Echvi_2825	0.14	-1.1
3,381,665	-		Echvi_2825	0.14	-0.9
3,381,684	+		Echvi_2825	0.14	+0.4
3,381,684	+		Echvi_2825	0.14	-1.7
3,381,684	+		Echvi_2825	0.14	-0.8
3,381,685	-		Echvi_2825	0.14	-0.6
3,381,685	-		Echvi_2825	0.14	-0.9
3,381,695	+		Echvi_2825	0.15	-1.0
3,381,696	-		Echvi_2825	0.15	-1.6
3,381,700	+		Echvi_2825	0.15	+1.7
3,381,802	+		Echvi_2825	0.18	-1.3
3,381,920	+		Echvi_2825	0.21	+0.1
3,381,935	-		Echvi_2825	0.22	+1.1
3,381,962	+		Echvi_2825	0.23	-2.2
3,381,963	-		Echvi_2825	0.23	-0.2
3,381,963	-		Echvi_2825	0.23	-0.6
3,381,964	+		Echvi_2825	0.23	-0.1
3,381,964	+		Echvi_2825	0.23	+1.3
3,381,965	-		Echvi_2825	0.23	-0.9
3,381,965	-		Echvi_2825	0.23	+0.1
3,382,133	+		Echvi_2825	0.28	-0.6
3,382,168	+		Echvi_2825	0.29	+0.9