Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1326

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
1,534,861	-		Echvi_1325	0.77	-0.8
1,534,887	-		Echvi_1325	0.79	+0.7
1,534,903	+		Echvi_1325	0.80	-0.5
1,534,904	-		Echvi_1325	0.80	+0.2
1,534,909	+		Echvi_1325	0.80	+0.1
1,534,910	-		Echvi_1325	0.80	-1.1
1,534,910	-		Echvi_1325	0.80	+0.5
1,534,911	+		Echvi_1325	0.80	-1.8
1,534,912	-		Echvi_1325	0.80	+1.3
1,534,912	-		Echvi_1325	0.80	-0.2
1,534,912	-		Echvi_1325	0.80	+0.5
1,534,938	-		Echvi_1325	0.81	+0.5
1,534,999	-		Echvi_1325	0.84	+0.2
1,535,017	-		Echvi_1325	0.85	+0.3
1,535,101	+		Echvi_1325	0.89	+0.7
1,535,110	+		Echvi_1325	0.90	-1.6
1,535,117	-				+0.8
1,535,189	-				+0.4
1,535,201	-				+1.0
1,535,201	-				+0.1
1,535,215	-				+0.2
1,535,225	+				-0.9
1,535,226	-				-0.0
1,535,226	-				+1.1
1,535,226	-				+3.0
1,535,226	-				+1.0
1,535,226	-				+0.6
1,535,226	-				-0.4
1,535,226	-				-0.7
1,535,246	+				+1.0
1,535,247	-				-0.6
1,535,325	+				-0.7
1,535,326	-				+0.3
1,535,332	-				+0.7
1,535,334	+				-1.2
1,535,334	+				-3.5
1,535,334	+				-0.4
1,535,335	-				+0.8
1,535,407	+				+0.5
1,535,408	-				-1.9
1,535,408	-				+1.1
1,535,408	-				+1.0
1,535,424	+				-3.8
1,535,424	+				-0.2
1,535,424	+				-0.5
1,535,425	-				-0.2
1,535,425	-				-2.0
1,535,425	-				-1.0
1,535,428	+				+0.7
1,535,429	-				+0.3
1,535,443	-				+0.1
1,535,443	-				+0.3
1,535,474	+				+1.0
1,535,475	-				-2.6
1,535,475	-				-0.7
1,535,475	-				-0.7
1,535,477	+				+0.2
1,535,477	+				-0.0
1,535,477	+				-0.3
1,535,477	+				-1.1
1,535,478	-				+0.7
1,535,478	-				+1.2
1,535,514	+				+0.4
1,535,547	+				-0.9
1,535,572	+				-2.5
1,535,580	-				-0.1
1,535,580	-				-1.4
1,535,661	+				+0.4
1,535,682	+				-1.5
1,535,712	-				-0.6
1,535,762	+				+0.2
1,535,762	+				+0.7
1,535,763	-				+0.7
1,535,767	+				+0.3
1,535,767	+				-0.7
1,535,768	-				+0.1
1,535,768	-				+1.1
1,535,768	-				-0.5
1,535,768	-				+1.1
1,535,771	+				-1.7
1,535,772	-				+0.9
1,535,772	-				-1.2
1,535,773	+				+1.7
1,535,773	+				-0.6
1,535,773	+				-2.7
1,535,793	+				-2.7
1,535,819	-				-0.2
1,535,969	+		Echvi_1326	0.11	+0.1
1,536,214	+		Echvi_1326	0.26	+0.4
1,536,215	+		Echvi_1326	0.26	-0.3
1,536,215	+		Echvi_1326	0.26	-0.3
1,536,215	+		Echvi_1326	0.26	-2.7
1,536,216	-		Echvi_1326	0.26	+0.9
1,536,225	+		Echvi_1326	0.26	-0.0
1,536,255	+		Echvi_1326	0.28	-0.1
1,536,255	+		Echvi_1326	0.28	+0.9
1,536,255	+		Echvi_1326	0.28	-0.6
1,536,255	+		Echvi_1326	0.28	+0.0
1,536,255	+		Echvi_1326	0.28	-2.3
1,536,256	-		Echvi_1326	0.28	+0.5
1,536,437	+		Echvi_1326	0.39	-1.6
1,536,437	+		Echvi_1326	0.39	+0.3
1,536,437	+		Echvi_1326	0.39	+1.3
1,536,437	+		Echvi_1326	0.39	+0.2
1,536,449	+		Echvi_1326	0.40	-0.3
1,536,449	+		Echvi_1326	0.40	-0.6
1,536,450	-		Echvi_1326	0.40	-0.2
1,536,450	-		Echvi_1326	0.40	+0.9
1,536,450	-		Echvi_1326	0.40	-0.4
1,536,467	+		Echvi_1326	0.41	-0.1
1,536,539	+		Echvi_1326	0.45	-2.9
1,536,539	+		Echvi_1326	0.45	-1.8
1,536,539	+		Echvi_1326	0.45	-2.1
1,536,539	+		Echvi_1326	0.45	-0.4
1,536,539	+		Echvi_1326	0.45	+0.3
1,536,539	+		Echvi_1326	0.45	+1.0
1,536,540	-		Echvi_1326	0.45	+2.0
1,536,540	-		Echvi_1326	0.45	+0.1
1,536,540	-		Echvi_1326	0.45	-0.5
1,536,540	-		Echvi_1326	0.45	-0.2
1,536,541	+		Echvi_1326	0.45	+0.5
1,536,542	-		Echvi_1326	0.45	+1.7
1,536,560	-		Echvi_1326	0.46	-0.0
1,536,607	+		Echvi_1326	0.49	-1.7
1,536,608	-		Echvi_1326	0.49	+0.5
1,536,685	+		Echvi_1326	0.53	-1.3
1,536,686	-		Echvi_1326	0.54	-0.9
1,536,707	+		Echvi_1326	0.55	-1.2
1,536,707	+		Echvi_1326	0.55	-0.3
1,536,707	+		Echvi_1326	0.55	-1.8
1,536,707	+		Echvi_1326	0.55	+0.6
1,536,707	+		Echvi_1326	0.55	-0.5
1,536,708	-		Echvi_1326	0.55	-0.1
1,536,708	-		Echvi_1326	0.55	+1.1
1,536,708	-		Echvi_1326	0.55	+0.7
1,536,709	+		Echvi_1326	0.55	+0.3
1,536,710	-		Echvi_1326	0.55	+1.7
1,536,719	+		Echvi_1326	0.55	-1.1
1,536,719	+		Echvi_1326	0.55	-0.8
1,536,720	-		Echvi_1326	0.56	-0.2
1,536,724	+		Echvi_1326	0.56	-0.9
1,536,724	+		Echvi_1326	0.56	+0.2
1,536,725	-		Echvi_1326	0.56	-2.7
1,536,738	-		Echvi_1326	0.57	+0.5
1,536,832	-		Echvi_1326	0.62	-2.9
1,536,956	-		Echvi_1326	0.69	+0.2
1,537,014	+		Echvi_1326	0.73	-2.1
1,537,014	+		Echvi_1326	0.73	-1.1
1,537,014	+		Echvi_1326	0.73	+1.8
1,537,014	+		Echvi_1326	0.73	-1.9
1,537,014	+		Echvi_1326	0.73	-0.1
1,537,015	-		Echvi_1326	0.73	-1.0
1,537,015	-		Echvi_1326	0.73	+0.3
1,537,015	-		Echvi_1326	0.73	+0.0
1,537,034	+		Echvi_1326	0.74	-0.8
1,537,034	+		Echvi_1326	0.74	+0.5
1,537,035	-		Echvi_1326	0.74	+1.9
1,537,035	-		Echvi_1326	0.74	-0.2
1,537,035	-		Echvi_1326	0.74	+0.8
1,537,035	-		Echvi_1326	0.74	+0.2
1,537,035	-		Echvi_1326	0.74	+0.3
1,537,044	+		Echvi_1326	0.75	+0.0
1,537,044	+		Echvi_1326	0.75	-0.9
1,537,044	+		Echvi_1326	0.75	-0.7
1,537,130	+		Echvi_1326	0.80	+0.6
1,537,130	+		Echvi_1326	0.80	+0.1
1,537,130	+		Echvi_1326	0.80	-0.1
1,537,198	+		Echvi_1326	0.84	+0.7
1,537,198	+		Echvi_1326	0.84	+1.2
1,537,198	+		Echvi_1326	0.84	+0.1
1,537,247	+		Echvi_1326	0.87	-0.9
1,537,248	-		Echvi_1326	0.87	-0.2
1,537,248	-		Echvi_1326	0.87	-0.3
1,537,248	-		Echvi_1326	0.87	+1.6
1,537,262	+		Echvi_1326	0.87	-0.6
1,537,262	+		Echvi_1326	0.87	-0.5
1,537,262	+		Echvi_1326	0.87	-3.2
1,537,367	+				-0.5
1,537,367	+				+0.0
1,537,367	+				-1.1
1,537,368	-				+1.7
1,537,385	+				-0.4
1,537,385	+				+0.4
1,537,385	+				-1.0
1,537,385	+				+2.5
1,537,386	-				+1.2
1,537,386	-				-0.5
1,537,386	-				+1.7
1,537,386	-				+0.1
1,537,386	-				+1.3
1,537,386	-				-0.5
1,537,387	+				+0.5
1,537,387	+				-0.2
1,537,387	+				+1.7
1,537,387	+				-0.7
1,537,447	+				-0.4
1,537,448	-				-0.8
1,537,448	-				+0.8
1,537,473	-				-1.7
1,537,481	-				+1.1
1,537,510	+				+0.4
1,537,511	-				+0.1
1,537,631	+				+0.0
1,537,635	+				+0.4
1,537,636	-				-0.8
1,537,636	-				+1.3
1,537,636	-				-0.7
1,537,652	+				+0.1
1,537,688	-				+2.3
1,537,710	+				-1.1
1,537,711	-				+0.8
1,537,715	-				+0.8
1,537,747	+		Echvi_1327	0.13	-0.5
1,537,899	+		Echvi_1327	0.53	-0.5
1,537,962	-		Echvi_1327	0.69	-0.3
1,537,972	+		Echvi_1327	0.72	-0.1
1,537,972	+		Echvi_1327	0.72	+0.5
1,537,973	-		Echvi_1327	0.72	+0.2
1,537,974	-		Echvi_1327	0.72	-0.8
1,538,021	+		Echvi_1327	0.85	+0.8
1,538,030	+		Echvi_1327	0.87	-1.3
1,538,030	+		Echvi_1327	0.87	+0.1
1,538,049	-				-0.7
1,538,062	-				-1.8
1,538,095	-				-1.1
1,538,112	+				-0.4
1,538,112	+				-0.8
1,538,112	+				-0.8
1,538,113	-				-0.1
1,538,113	-				+0.4
1,538,126	+				+0.4
1,538,165	+		Echvi_1328	0.13	+0.8
1,538,165	+		Echvi_1328	0.13	-1.5
1,538,166	-		Echvi_1328	0.13	+0.4
1,538,176	+		Echvi_1328	0.15	+0.4
1,538,176	+		Echvi_1328	0.15	-0.8
1,538,176	+		Echvi_1328	0.15	-2.2
1,538,176	+		Echvi_1328	0.15	+0.5
1,538,176	+		Echvi_1328	0.15	+0.9
1,538,177	-		Echvi_1328	0.15	-1.6
1,538,213	+		Echvi_1328	0.22	-0.1
1,538,214	-		Echvi_1328	0.23	-0.4
1,538,258	+		Echvi_1328	0.32	-0.5
1,538,267	+		Echvi_1328	0.33	-0.1
1,538,268	-		Echvi_1328	0.34	-1.5
1,538,339	+		Echvi_1328	0.48	-0.2
1,538,340	-		Echvi_1328	0.48	+1.4
1,538,340	-		Echvi_1328	0.48	+0.2
1,538,340	-		Echvi_1328	0.48	-0.2
1,538,340	-		Echvi_1328	0.48	+0.0
1,538,340	-		Echvi_1328	0.48	-0.2
1,538,355	-		Echvi_1328	0.51	+0.4
1,538,391	-		Echvi_1328	0.59	-1.1
1,538,416	+		Echvi_1328	0.64	-0.1
1,538,417	-		Echvi_1328	0.64	+0.7
1,538,417	-		Echvi_1328	0.64	-0.1
1,538,417	-		Echvi_1328	0.64	-0.7
1,538,472	-		Echvi_1328	0.75	+0.3