Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1229

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
1,409,091	-		Echvi_1228	0.53	+0.9
1,409,132	+		Echvi_1228	0.57	+0.2
1,409,218	-		Echvi_1228	0.65	-0.1
1,409,234	-		Echvi_1228	0.66	+1.5
1,409,266	-		Echvi_1228	0.69	+0.7
1,409,333	-		Echvi_1228	0.75	+0.6
1,409,333	-		Echvi_1228	0.75	-0.0
1,409,333	-		Echvi_1228	0.75	+0.5
1,409,476	+		Echvi_1228	0.88	+0.0
1,409,476	+		Echvi_1228	0.88	-0.8
1,409,477	-		Echvi_1228	0.89	+0.5
1,409,491	+		Echvi_1228	0.90	-1.1
1,409,567	+				-0.4
1,409,567	+				+2.0
1,409,568	-				+0.5
1,409,568	-				-1.1
1,409,599	+				-3.7
1,409,622	+				+0.5
1,409,634	+				-1.1
1,409,634	+				-1.5
1,409,647	+				+1.5
1,409,648	-				-0.0
1,409,648	-				+0.1
1,409,651	+				-1.9
1,409,652	-				-0.1
1,409,701	-				+0.7
1,409,701	-				-0.8
1,409,701	-				-0.6
1,409,711	-				-0.9
1,409,711	-				-0.4
1,409,711	-				-0.3
1,409,711	-				+0.2
1,409,711	-				-0.9
1,409,720	-				+1.5
1,409,782	-				+0.3
1,409,782	-				+1.4
1,409,815	-				-0.3
1,409,871	-				-0.4
1,409,916	+				-2.4
1,409,917	-				-1.1
1,409,959	-				+0.1
1,409,983	-				+0.1
1,409,985	-				-0.1
1,409,985	-				-1.4
1,409,985	-				-0.5
1,409,990	-				+0.0
1,410,047	+				+1.0
1,410,075	+				+0.4
1,410,075	+				+1.7
1,410,075	+				+1.2
1,410,076	-				-0.8
1,410,077	+				-0.6
1,410,089	+				-0.4
1,410,161	+				+1.9
1,410,162	-				-2.4
1,410,177	-				-1.5
1,410,179	+				+0.3
1,410,180	-				-0.0
1,410,180	-				+0.1
1,410,184	+				+0.1
1,410,190	-				-0.8
1,410,221	+				+1.4
1,410,222	-				-1.1
1,410,241	+				+0.1
1,410,241	+				+2.1
1,410,241	+				+1.0
1,410,241	+				-0.6
1,410,319	+		Echvi_1229	0.14	+0.5
1,410,320	-		Echvi_1229	0.14	-0.8
1,410,407	-		Echvi_1229	0.19	+0.6
1,410,410	+		Echvi_1229	0.19	-0.5
1,410,411	-		Echvi_1229	0.19	-0.8
1,410,411	-		Echvi_1229	0.19	-1.4
1,410,430	-		Echvi_1229	0.20	-0.2
1,410,495	+		Echvi_1229	0.24	-0.7
1,410,504	-		Echvi_1229	0.25	-0.1
1,410,522	+		Echvi_1229	0.26	-1.7
1,410,523	-		Echvi_1229	0.26	+0.3
1,410,530	-		Echvi_1229	0.26	-2.7
1,410,546	+		Echvi_1229	0.27	-0.4
1,410,547	-		Echvi_1229	0.27	-1.0
1,410,547	-		Echvi_1229	0.27	+0.7
1,410,547	-		Echvi_1229	0.27	-0.1
1,410,549	+		Echvi_1229	0.27	-0.6
1,410,611	+		Echvi_1229	0.31	-0.2
1,410,654	+		Echvi_1229	0.33	-0.3
1,410,654	+		Echvi_1229	0.33	-1.3
1,410,655	-		Echvi_1229	0.33	+0.1
1,410,655	-		Echvi_1229	0.33	-1.2
1,410,675	-		Echvi_1229	0.35	-1.2
1,410,676	+		Echvi_1229	0.35	-0.1
1,410,676	+		Echvi_1229	0.35	-0.4
1,410,677	-		Echvi_1229	0.35	+1.0
1,410,677	-		Echvi_1229	0.35	-1.2
1,410,677	-		Echvi_1229	0.35	-0.3
1,410,677	-		Echvi_1229	0.35	-2.3
1,410,677	-		Echvi_1229	0.35	-1.4
1,410,734	-		Echvi_1229	0.38	-0.1
1,410,734	-		Echvi_1229	0.38	+0.1
1,410,796	+		Echvi_1229	0.42	-0.2
1,410,797	-		Echvi_1229	0.42	-0.2
1,410,797	-		Echvi_1229	0.42	+0.3
1,410,862	-		Echvi_1229	0.46	-1.4
1,410,862	-		Echvi_1229	0.46	+0.4
1,410,862	-		Echvi_1229	0.46	+0.2
1,410,866	-		Echvi_1229	0.46	-1.1
1,410,866	-		Echvi_1229	0.46	+0.6
1,410,960	-		Echvi_1229	0.51	+0.1
1,410,967	+		Echvi_1229	0.52	+0.5
1,410,967	+		Echvi_1229	0.52	+1.0
1,410,967	+		Echvi_1229	0.52	+1.8
1,411,128	-		Echvi_1229	0.61	+0.1
1,411,257	-		Echvi_1229	0.69	-1.1
1,411,260	-		Echvi_1229	0.69	-0.5
1,411,260	-		Echvi_1229	0.69	-2.1
1,411,260	-		Echvi_1229	0.69	-0.5
1,411,265	+		Echvi_1229	0.69	-0.6
1,411,266	-		Echvi_1229	0.69	-0.4
1,411,266	-				+0.5
1,411,267	+		Echvi_1229	0.69	-0.7
1,411,267	+		Echvi_1229	0.69	-1.7
1,411,267	+		Echvi_1229	0.69	-0.6
1,411,267	+		Echvi_1229	0.69	+0.3
1,411,267	+		Echvi_1229	0.69	-0.8
1,411,267	+		Echvi_1229	0.69	-0.7
1,411,267	+		Echvi_1229	0.69	-0.1
1,411,267	+		Echvi_1229	0.69	-0.6
1,411,268	-		Echvi_1229	0.69	-0.3
1,411,268	-		Echvi_1229	0.69	+0.9
1,411,268	-		Echvi_1229	0.69	-0.3
1,411,268	-		Echvi_1229	0.69	-1.9
1,411,268	-		Echvi_1229	0.69	-0.3
1,411,268	-		Echvi_1229	0.69	-1.8
1,411,269	+		Echvi_1229	0.69	-1.0
1,411,269	+		Echvi_1229	0.69	-1.6
1,411,269	+		Echvi_1229	0.69	-0.9
1,411,269	+		Echvi_1229	0.69	+0.4
1,411,269	+		Echvi_1229	0.69	+0.2
1,411,269	+		Echvi_1229	0.69	-1.6
1,411,270	-		Echvi_1229	0.69	+1.8
1,411,270	-		Echvi_1229	0.69	-0.5
1,411,270	-		Echvi_1229	0.69	+0.3
1,411,304	+		Echvi_1229	0.71	-0.8
1,411,305	-		Echvi_1229	0.72	-0.6
1,411,340	+		Echvi_1229	0.74	+0.3
1,411,341	-		Echvi_1229	0.74	-0.9
1,411,357	+		Echvi_1229	0.75	-0.5
1,411,369	+		Echvi_1229	0.75	+0.4
1,411,455	+		Echvi_1229	0.80	-0.1
1,411,475	+		Echvi_1229	0.81	-0.9
1,411,475	+		Echvi_1229	0.81	+1.1
1,411,477	+		Echvi_1229	0.82	+0.1
1,411,477	+		Echvi_1229	0.82	-0.4
1,411,478	-		Echvi_1229	0.82	-0.0
1,411,511	+		Echvi_1229	0.84	-0.6
1,411,511	+		Echvi_1229	0.84	-0.0
1,411,512	-		Echvi_1229	0.84	-0.1
1,411,512	-		Echvi_1229	0.84	-0.3
1,411,512	-		Echvi_1229	0.84	-0.3
1,411,513	+		Echvi_1229	0.84	-0.0
1,411,513	+		Echvi_1229	0.84	+1.4
1,411,513	+				+1.9
1,411,513	+		Echvi_1229	0.84	-1.3
1,411,513	+		Echvi_1229	0.84	-2.6
1,411,513	+		Echvi_1229	0.84	+0.5
1,411,513	+		Echvi_1229	0.84	-1.7
1,411,514	-		Echvi_1229	0.84	-1.2
1,411,519	+		Echvi_1229	0.84	+0.9
1,411,519	+		Echvi_1229	0.84	+0.3
1,411,524	+		Echvi_1229	0.84	-1.2
1,411,524	+		Echvi_1229	0.84	+0.4
1,411,563	-		Echvi_1229	0.87	-1.2
1,411,628	+				+1.1
1,411,660	+				+0.8
1,411,661	-				+0.8
1,411,695	-				+2.5
1,411,727	+				+0.6
1,411,728	-				+0.8
1,411,728	-				-0.3
1,411,770	-				-0.3
1,411,770	-				+0.1
1,411,791	-				-0.1
1,411,791	-				-0.7
1,411,831	+				-0.9
1,411,864	-				-1.9
1,411,864	-				-0.0
1,411,866	+				-1.9
1,411,866	+				+0.4
1,411,867	-				+0.7
1,411,873	-				+1.3
1,411,903	+				-0.7
1,411,903	+				-0.1
1,411,938	+				-0.6
1,411,949	+				-0.5
1,411,950	-				+0.9
1,411,950	-				-1.3
1,411,993	+				-0.6
1,412,011	+				+0.4
1,412,070	+				-2.5
1,412,070	+				-0.6
1,412,103	+				-0.3
1,412,116	+				-1.4
1,412,143	+		Echvi_1230	0.10	-0.4
1,412,143	+		Echvi_1230	0.10	+0.4
1,412,143	+		Echvi_1230	0.10	-0.2
1,412,143	+		Echvi_1230	0.10	+0.3
1,412,144	-		Echvi_1230	0.10	+0.2
1,412,191	+		Echvi_1230	0.12	+0.8
1,412,192	-		Echvi_1230	0.12	+1.0
1,412,192	-		Echvi_1230	0.12	+0.7
1,412,213	+		Echvi_1230	0.13	-0.6
1,412,213	+		Echvi_1230	0.13	-1.3
1,412,216	-		Echvi_1230	0.13	+0.0
1,412,216	-		Echvi_1230	0.13	-1.2
1,412,216	-		Echvi_1230	0.13	-0.4
1,412,216	-		Echvi_1230	0.13	-1.9
1,412,250	+		Echvi_1230	0.14	-0.1
1,412,250	+		Echvi_1230	0.14	-1.0
1,412,250	+		Echvi_1230	0.14	+0.6
1,412,251	-		Echvi_1230	0.14	+1.1
1,412,305	-		Echvi_1230	0.16	-1.3
1,412,305	-		Echvi_1230	0.16	-0.1
1,412,321	-		Echvi_1230	0.16	+0.1
1,412,321	-		Echvi_1230	0.16	-1.9
1,412,328	-		Echvi_1230	0.16	-1.6
1,412,468	+		Echvi_1230	0.21	-0.8
1,412,469	-		Echvi_1230	0.21	-0.6
1,412,469	-		Echvi_1230	0.21	-0.3
1,412,469	-		Echvi_1230	0.21	+1.5
1,412,469	-		Echvi_1230	0.21	-1.4
1,412,504	+		Echvi_1230	0.22	-0.8
1,412,504	+		Echvi_1230	0.22	+0.3
1,412,504	+		Echvi_1230	0.22	-1.0
1,412,504	+		Echvi_1230	0.22	-0.5
1,412,572	+		Echvi_1230	0.24	-1.2
1,412,572	+		Echvi_1230	0.24	-0.4
1,412,572	+		Echvi_1230	0.24	-0.5
1,412,581	+		Echvi_1230	0.24	+1.7
1,412,582	-		Echvi_1230	0.24	+0.8
1,412,608	+		Echvi_1230	0.25	-1.3
1,412,628	-		Echvi_1230	0.26	-1.2
1,412,628	-		Echvi_1230	0.26	-0.8
1,412,628	-		Echvi_1230	0.26	-1.1
1,412,657	+		Echvi_1230	0.27	-0.2
1,412,657	+		Echvi_1230	0.27	-1.1
1,412,658	-		Echvi_1230	0.27	-0.3
1,412,658	-		Echvi_1230	0.27	-0.9
1,412,658	-		Echvi_1230	0.27	-0.4
1,412,658	-		Echvi_1230	0.27	+0.1
1,412,658	-		Echvi_1230	0.27	+0.2
1,412,734	+		Echvi_1230	0.29	-0.2
1,412,748	+		Echvi_1230	0.29	-1.1
1,412,748	+		Echvi_1230	0.29	+0.2
1,412,748	+		Echvi_1230	0.29	+1.3
1,412,748	+		Echvi_1230	0.29	+0.6
1,412,749	-		Echvi_1230	0.30	-0.4
1,412,749	-		Echvi_1230	0.30	-1.8
1,412,751	+		Echvi_1230	0.30	+0.4
1,412,751	+		Echvi_1230	0.30	+0.5
1,412,752	-		Echvi_1230	0.30	-0.5
1,412,788	+		Echvi_1230	0.31	-0.7