Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1162

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
1,329,880	+		Echvi_1161	0.43	-0.3
1,329,887	-				-0.1
1,329,935	+		Echvi_1161	0.47	+0.4
1,329,935	+		Echvi_1161	0.47	-1.8
1,329,935	+		Echvi_1161	0.47	-1.5
1,329,935	+		Echvi_1161	0.47	-0.6
1,329,936	-		Echvi_1161	0.48	-1.7
1,329,936	-		Echvi_1161	0.48	+0.7
1,329,936	-		Echvi_1161	0.48	+0.2
1,330,006	+		Echvi_1161	0.53	+0.9
1,330,006	+		Echvi_1161	0.53	+1.2
1,330,007	-		Echvi_1161	0.53	-0.9
1,330,007	-		Echvi_1161	0.53	-1.3
1,330,019	+		Echvi_1161	0.54	-0.3
1,330,225	+		Echvi_1161	0.70	-0.8
1,330,226	-		Echvi_1161	0.70	-1.4
1,330,258	+		Echvi_1161	0.72	+1.0
1,330,259	-		Echvi_1161	0.72	-1.3
1,330,259	-		Echvi_1161	0.72	+0.3
1,330,418	+		Echvi_1161	0.85	-0.7
1,330,454	+		Echvi_1161	0.88	+1.2
1,330,455	-		Echvi_1161	0.88	+0.2
1,330,455	-		Echvi_1161	0.88	-1.3
1,330,455	-		Echvi_1161	0.88	-0.9
1,330,455	-		Echvi_1161	0.88	+0.9
1,330,459	+		Echvi_1161	0.88	-0.1
1,330,459	+		Echvi_1161	0.88	-0.4
1,330,459	+		Echvi_1161	0.88	-0.2
1,330,460	-		Echvi_1161	0.88	+1.1
1,330,460	-		Echvi_1161	0.88	+0.0
1,330,468	+		Echvi_1161	0.89	-0.4
1,330,468	+		Echvi_1161	0.89	-2.8
1,330,469	-		Echvi_1161	0.89	-0.3
1,330,534	+				-0.0
1,330,535	-				+1.0
1,330,589	+				-2.6
1,330,589	+				+1.0
1,330,589	+				+1.4
1,330,589	+				+0.4
1,330,589	+				-0.4
1,330,590	-				-1.8
1,330,590	-				+0.3
1,330,590	-				+0.6
1,330,590	-				-0.9
1,330,590	-				+2.5
1,330,590	-				+1.3
1,330,590	-				+0.7
1,330,613	+				+0.4
1,330,614	-				+0.1
1,330,614	-				-0.4
1,330,651	+				-1.6
1,330,666	+				-2.1
1,330,667	-				+0.3
1,330,667	-				-0.8
1,330,667	-				-0.3
1,330,667	-				+0.6
1,330,703	-				+0.4
1,330,767	-				+0.3
1,330,849	+				-0.8
1,330,865	+				-0.7
1,330,866	-				-0.4
1,330,866	-				-0.1
1,331,011	+		Echvi_1162	0.11	+0.4
1,331,030	+		Echvi_1162	0.12	-0.8
1,331,032	+		Echvi_1162	0.12	-0.3
1,331,032	+		Echvi_1162	0.12	-0.8
1,331,032	+		Echvi_1162	0.12	-1.1
1,331,032	+		Echvi_1162	0.12	+0.8
1,331,033	-		Echvi_1162	0.12	-0.6
1,331,033	-		Echvi_1162	0.12	-0.8
1,331,149	+		Echvi_1162	0.18	-0.6
1,331,301	+		Echvi_1162	0.25	-0.3
1,331,422	-		Echvi_1162	0.31	-0.3
1,331,494	+		Echvi_1162	0.34	-2.0
1,331,523	+		Echvi_1162	0.36	-0.4
1,331,524	-		Echvi_1162	0.36	-0.9
1,331,556	-		Echvi_1162	0.37	-0.9
1,331,695	+		Echvi_1162	0.44	+0.5
1,331,696	-		Echvi_1162	0.44	-0.1
1,331,715	+		Echvi_1162	0.45	+0.4
1,331,792	+		Echvi_1162	0.48	+0.3
1,331,793	-		Echvi_1162	0.48	-0.9
1,331,793	-		Echvi_1162	0.48	-0.4
1,332,003	+		Echvi_1162	0.59	-0.8
1,332,023	+		Echvi_1162	0.59	+0.7
1,332,023	+		Echvi_1162	0.59	+1.0
1,332,024	-		Echvi_1162	0.60	-1.8
1,332,024	-		Echvi_1162	0.60	+0.7
1,332,024	-		Echvi_1162	0.60	-0.4
1,332,024	-		Echvi_1162	0.60	+0.7
1,332,087	-		Echvi_1162	0.63	-1.2
1,332,225	-		Echvi_1162	0.69	-0.6
1,332,278	-		Echvi_1162	0.72	+1.5
1,332,323	-		Echvi_1162	0.74	-2.7
1,332,333	+		Echvi_1162	0.74	-0.5
1,332,333	+		Echvi_1162	0.74	-0.8
1,332,334	-		Echvi_1162	0.74	-0.0
1,332,334	-		Echvi_1162	0.74	-1.0
1,332,334	-		Echvi_1162	0.74	-0.5
1,332,343	+		Echvi_1162	0.75	+0.5
1,332,543	-		Echvi_1162	0.84	-1.6
1,332,543	-		Echvi_1162	0.84	-2.4
1,332,548	-		Echvi_1162	0.85	-0.5
1,332,559	+		Echvi_1162	0.85	-0.2
1,332,559	+		Echvi_1162	0.85	+0.1
1,332,560	-		Echvi_1162	0.85	-0.1
1,332,560	-		Echvi_1162	0.85	+0.2
1,332,560	-		Echvi_1162	0.85	-0.4
1,332,564	-		Echvi_1162	0.85	-0.1
1,332,771	+				+1.3
1,332,772	-				+1.6
1,332,772	-				-0.1
1,332,813	+				+0.3
1,332,865	-				-2.4
1,332,884	+				-1.0
1,332,960	-				-0.2
1,332,969	+				-0.4
1,332,970	-				-0.5
1,332,970	-				-0.8
1,333,100	+				-0.7
1,333,158	+				-2.0
1,333,159	-				+0.7
1,333,240	-				+0.7
1,333,282	+		Echvi_1163	0.12	+0.2
1,333,283	-		Echvi_1163	0.12	-2.0
1,333,322	-		Echvi_1163	0.14	-2.9
1,333,378	+		Echvi_1163	0.18	-0.1
1,333,428	+		Echvi_1163	0.22	+1.5
1,333,429	-		Echvi_1163	0.22	-0.7
1,333,440	+		Echvi_1163	0.23	-1.1
1,333,479	-		Echvi_1163	0.25	-0.7
1,333,479	-		Echvi_1163	0.25	-0.1
1,333,479	-		Echvi_1163	0.25	+0.2
1,333,479	-		Echvi_1163	0.25	-1.5
1,333,479	-		Echvi_1163	0.25	-0.6
1,333,481	+		Echvi_1163	0.26	+0.5
1,333,481	+		Echvi_1163	0.26	+0.2
1,333,481	+		Echvi_1163	0.26	+1.5
1,333,482	-		Echvi_1163	0.26	-2.3
1,333,482	-		Echvi_1163	0.26	+0.6
1,333,482	-		Echvi_1163	0.26	+0.4
1,333,482	-		Echvi_1163	0.26	+0.6
1,333,482	-		Echvi_1163	0.26	+0.1
1,333,530	+		Echvi_1163	0.29	+0.9
1,333,548	+		Echvi_1163	0.30	-0.1
1,333,549	-		Echvi_1163	0.30	+0.2
1,333,549	-		Echvi_1163	0.30	+0.6
1,333,549	-		Echvi_1163	0.30	-1.7
1,333,685	-		Echvi_1163	0.40	-1.2
1,333,690	+		Echvi_1163	0.40	+1.0
1,333,708	+		Echvi_1163	0.42	+0.2
1,333,708	+		Echvi_1163	0.42	+0.4
1,333,708	+		Echvi_1163	0.42	+0.4
1,333,754	+		Echvi_1163	0.45	+3.1
1,333,754	+		Echvi_1163	0.45	+1.0
1,333,754	+		Echvi_1163	0.45	-0.2
1,333,754	+		Echvi_1163	0.45	+0.8
1,333,754	+		Echvi_1163	0.45	+0.2
1,333,755	-		Echvi_1163	0.45	+1.6
1,333,755	-		Echvi_1163	0.45	+0.9
1,333,755	-		Echvi_1163	0.45	+0.7
1,333,789	+		Echvi_1163	0.47	+1.5
1,333,819	+		Echvi_1163	0.49	+0.3
1,333,819	+		Echvi_1163	0.49	+0.5
1,333,819	+		Echvi_1163	0.49	-0.2
1,333,819	+		Echvi_1163	0.49	-0.6
1,333,820	-		Echvi_1163	0.49	+0.5
1,333,820	-		Echvi_1163	0.49	-1.1
1,333,823	+		Echvi_1163	0.50	-0.6
1,333,823	+		Echvi_1163	0.50	+1.1
1,333,823	+		Echvi_1163	0.50	-1.3
1,333,823	+		Echvi_1163	0.50	-1.2
1,333,824	-		Echvi_1163	0.50	-0.5
1,333,824	-		Echvi_1163	0.50	-1.0
1,333,842	+		Echvi_1163	0.51	-1.1
1,333,842	+		Echvi_1163	0.51	+1.6
1,333,843	-		Echvi_1163	0.51	+0.2