Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4462 and EX28DRAFT_4463 are separated by 12 nucleotides EX28DRAFT_4463 and EX28DRAFT_4464 are separated by 197 nucleotides
EX28DRAFT_4462: EX28DRAFT_4462 - WzyE protein, at 29,513 to 30,865
_4462
EX28DRAFT_4463: EX28DRAFT_4463 - Teichoic acid biosynthesis proteins, at 30,878 to 31,618
_4463
EX28DRAFT_4464: EX28DRAFT_4464 - Gamma-aminobutyrate permease and related permeases, at 31,816 to 33,201
_4464
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 30.791 kb on + strand at 30.867 kb on + strand at 30.876 kb on + strand at 30.876 kb on + strand at 30.886 kb on + strand at 30.887 kb on - strand at 30.887 kb on - strand at 30.994 kb on + strand, within EX28DRAFT_4463 at 31.083 kb on - strand, within EX28DRAFT_4463 at 31.279 kb on + strand, within EX28DRAFT_4463 at 31.442 kb on + strand, within EX28DRAFT_4463 at 31.442 kb on + strand, within EX28DRAFT_4463 at 31.442 kb on + strand, within EX28DRAFT_4463 at 31.443 kb on - strand, within EX28DRAFT_4463 at 31.443 kb on - strand, within EX28DRAFT_4463 at 31.443 kb on - strand, within EX28DRAFT_4463 at 31.463 kb on + strand, within EX28DRAFT_4463 at 31.464 kb on - strand, within EX28DRAFT_4463 at 31.641 kb on - strand at 31.675 kb on - strand at 31.754 kb on - strand at 31.754 kb on - strand at 31.754 kb on - strand at 31.783 kb on - strand at 31.838 kb on + strand at 31.838 kb on + strand at 31.874 kb on + strand at 31.960 kb on + strand, within EX28DRAFT_4464 at 31.961 kb on - strand, within EX28DRAFT_4464 at 31.961 kb on - strand, within EX28DRAFT_4464 at 31.962 kb on + strand, within EX28DRAFT_4464 at 31.963 kb on - strand, within EX28DRAFT_4464 at 31.963 kb on - strand, within EX28DRAFT_4464 at 32.062 kb on + strand, within EX28DRAFT_4464 at 32.063 kb on - strand, within EX28DRAFT_4464 at 32.064 kb on + strand, within EX28DRAFT_4464 at 32.064 kb on + strand, within EX28DRAFT_4464 at 32.064 kb on + strand, within EX28DRAFT_4464 at 32.065 kb on - strand, within EX28DRAFT_4464 at 32.065 kb on - strand, within EX28DRAFT_4464 at 32.109 kb on + strand, within EX28DRAFT_4464 at 32.109 kb on + strand, within EX28DRAFT_4464 at 32.110 kb on - strand, within EX28DRAFT_4464 at 32.156 kb on - strand, within EX28DRAFT_4464 at 32.452 kb on + strand, within EX28DRAFT_4464 at 32.475 kb on + strand, within EX28DRAFT_4464
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 30,791 + +0.4 30,867 + +1.1 30,876 + -2.7 30,876 + +0.2 30,886 + -0.6 30,887 - +0.3 30,887 - -1.4 30,994 + EX28DRAFT_4463 0.16 +0.0 31,083 - EX28DRAFT_4463 0.28 +0.4 31,279 + EX28DRAFT_4463 0.54 +0.3 31,442 + EX28DRAFT_4463 0.76 -0.5 31,442 + EX28DRAFT_4463 0.76 -0.2 31,442 + EX28DRAFT_4463 0.76 -0.6 31,443 - EX28DRAFT_4463 0.76 -0.6 31,443 - EX28DRAFT_4463 0.76 -1.4 31,443 - EX28DRAFT_4463 0.76 -0.5 31,463 + EX28DRAFT_4463 0.79 -2.2 31,464 - EX28DRAFT_4463 0.79 -0.9 31,641 - -1.1 31,675 - -1.6 31,754 - -0.5 31,754 - -0.3 31,754 - -0.3 31,783 - -0.5 31,838 + +0.3 31,838 + +0.9 31,874 + -0.4 31,960 + EX28DRAFT_4464 0.10 -0.1 31,961 - EX28DRAFT_4464 0.10 +0.1 31,961 - EX28DRAFT_4464 0.10 +0.3 31,962 + EX28DRAFT_4464 0.11 +2.0 31,963 - EX28DRAFT_4464 0.11 -0.8 31,963 - EX28DRAFT_4464 0.11 -0.5 32,062 + EX28DRAFT_4464 0.18 +0.2 32,063 - EX28DRAFT_4464 0.18 -0.6 32,064 + EX28DRAFT_4464 0.18 -0.4 32,064 + EX28DRAFT_4464 0.18 +0.8 32,064 + EX28DRAFT_4464 0.18 -0.6 32,065 - EX28DRAFT_4464 0.18 -0.8 32,065 - EX28DRAFT_4464 0.18 -0.1 32,109 + EX28DRAFT_4464 0.21 +0.1 32,109 + EX28DRAFT_4464 0.21 +0.2 32,110 - EX28DRAFT_4464 0.21 -0.4 32,156 - EX28DRAFT_4464 0.25 -0.4 32,452 + EX28DRAFT_4464 0.46 -2.5 32,475 + EX28DRAFT_4464 0.48 -0.3
Or see this region's nucleotide sequence