Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4311 and EX28DRAFT_4312 are separated by 97 nucleotides EX28DRAFT_4312 and EX28DRAFT_4313 are separated by 96 nucleotides EX28DRAFT_4313 and EX28DRAFT_4314 are separated by 77 nucleotides
EX28DRAFT_4311: EX28DRAFT_4311 - ABC-type maltose transport systems, permease component, at 116,008 to 116,898
_4311
EX28DRAFT_4312: EX28DRAFT_4312 - Predicted membrane protein, at 116,996 to 117,406
_4312
EX28DRAFT_4313: EX28DRAFT_4313 - Bacterial transferase hexapeptide (six repeats)/Hexapeptide repeat of succinyl-transferase, at 117,503 to 117,955
_4313
EX28DRAFT_4314: EX28DRAFT_4314 - Bacterial putative lipoprotein (DUF940), at 118,033 to 120,129
_4314
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 116.019 kb on - strand at 116.019 kb on - strand at 116.019 kb on - strand at 116.019 kb on - strand at 116.060 kb on + strand at 116.061 kb on - strand at 116.061 kb on - strand at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.428 kb on + strand, within EX28DRAFT_4311 at 116.429 kb on - strand, within EX28DRAFT_4311 at 116.460 kb on - strand, within EX28DRAFT_4311 at 116.528 kb on + strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.529 kb on - strand, within EX28DRAFT_4311 at 116.660 kb on + strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.665 kb on - strand, within EX28DRAFT_4311 at 116.714 kb on + strand, within EX28DRAFT_4311 at 116.715 kb on - strand, within EX28DRAFT_4311 at 116.734 kb on + strand, within EX28DRAFT_4311 at 116.734 kb on + strand, within EX28DRAFT_4311 at 116.747 kb on + strand, within EX28DRAFT_4311 at 116.751 kb on + strand, within EX28DRAFT_4311 at 116.751 kb on + strand, within EX28DRAFT_4311 at 116.752 kb on - strand, within EX28DRAFT_4311 at 116.761 kb on + strand, within EX28DRAFT_4311 at 116.762 kb on - strand, within EX28DRAFT_4311 at 116.896 kb on + strand at 116.935 kb on - strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.940 kb on + strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.941 kb on - strand at 116.945 kb on + strand at 116.945 kb on + strand at 117.066 kb on + strand, within EX28DRAFT_4312 at 117.067 kb on - strand, within EX28DRAFT_4312 at 117.135 kb on + strand, within EX28DRAFT_4312 at 117.145 kb on - strand, within EX28DRAFT_4312 at 117.145 kb on - strand, within EX28DRAFT_4312 at 117.177 kb on + strand, within EX28DRAFT_4312 at 117.207 kb on + strand, within EX28DRAFT_4312 at 117.243 kb on + strand, within EX28DRAFT_4312 at 117.243 kb on + strand, within EX28DRAFT_4312 at 117.244 kb on - strand, within EX28DRAFT_4312 at 117.273 kb on - strand, within EX28DRAFT_4312 at 117.373 kb on + strand at 117.406 kb on + strand at 117.407 kb on - strand at 117.407 kb on - strand at 117.407 kb on - strand at 117.439 kb on + strand at 117.439 kb on + strand at 117.440 kb on - strand at 117.478 kb on + strand at 117.478 kb on + strand at 117.479 kb on - strand at 117.479 kb on - strand at 117.486 kb on - strand at 117.486 kb on - strand at 117.489 kb on + strand at 117.489 kb on + strand at 117.558 kb on + strand, within EX28DRAFT_4313 at 117.558 kb on + strand, within EX28DRAFT_4313 at 117.558 kb on + strand, within EX28DRAFT_4313 at 117.558 kb on + strand, within EX28DRAFT_4313 at 117.558 kb on + strand, within EX28DRAFT_4313 at 117.559 kb on - strand, within EX28DRAFT_4313 at 117.559 kb on - strand, within EX28DRAFT_4313 at 117.559 kb on - strand, within EX28DRAFT_4313 at 117.560 kb on + strand, within EX28DRAFT_4313 at 117.560 kb on + strand, within EX28DRAFT_4313 at 117.560 kb on + strand, within EX28DRAFT_4313 at 117.561 kb on - strand, within EX28DRAFT_4313 at 117.561 kb on - strand, within EX28DRAFT_4313 at 117.579 kb on - strand, within EX28DRAFT_4313 at 117.603 kb on + strand, within EX28DRAFT_4313 at 117.690 kb on - strand, within EX28DRAFT_4313 at 117.690 kb on - strand, within EX28DRAFT_4313 at 117.697 kb on + strand, within EX28DRAFT_4313 at 117.698 kb on - strand, within EX28DRAFT_4313 at 117.704 kb on - strand, within EX28DRAFT_4313 at 117.745 kb on + strand, within EX28DRAFT_4313 at 117.745 kb on + strand, within EX28DRAFT_4313 at 117.746 kb on - strand, within EX28DRAFT_4313 at 117.794 kb on - strand, within EX28DRAFT_4313 at 117.993 kb on + strand at 117.993 kb on + strand at 117.994 kb on - strand at 118.044 kb on + strand at 118.045 kb on - strand at 118.070 kb on + strand at 118.083 kb on + strand at 118.083 kb on + strand at 118.084 kb on - strand at 118.285 kb on - strand, within EX28DRAFT_4314 at 118.291 kb on - strand, within EX28DRAFT_4314
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 116,019 - -0.1 116,019 - -0.2 116,019 - +0.1 116,019 - +0.1 116,060 + -1.6 116,061 - -0.8 116,061 - +0.9 116,428 + EX28DRAFT_4311 0.47 +0.2 116,428 + EX28DRAFT_4311 0.47 -0.2 116,428 + EX28DRAFT_4311 0.47 +0.0 116,428 + EX28DRAFT_4311 0.47 +1.1 116,428 + EX28DRAFT_4311 0.47 +0.3 116,429 - EX28DRAFT_4311 0.47 -0.0 116,460 - EX28DRAFT_4311 0.51 -2.7 116,528 + EX28DRAFT_4311 0.58 -0.1 116,529 - EX28DRAFT_4311 0.58 -0.1 116,529 - EX28DRAFT_4311 0.58 +0.1 116,529 - EX28DRAFT_4311 0.58 +0.1 116,660 + EX28DRAFT_4311 0.73 +0.1 116,665 - EX28DRAFT_4311 0.74 -0.2 116,665 - EX28DRAFT_4311 0.74 -1.1 116,665 - EX28DRAFT_4311 0.74 +0.2 116,714 + EX28DRAFT_4311 0.79 -0.0 116,715 - EX28DRAFT_4311 0.79 -2.6 116,734 + EX28DRAFT_4311 0.81 -0.4 116,734 + EX28DRAFT_4311 0.81 +0.3 116,747 + EX28DRAFT_4311 0.83 -0.3 116,751 + EX28DRAFT_4311 0.83 -0.1 116,751 + EX28DRAFT_4311 0.83 +0.4 116,752 - EX28DRAFT_4311 0.84 -0.4 116,761 + EX28DRAFT_4311 0.85 -0.1 116,762 - EX28DRAFT_4311 0.85 +0.3 116,896 + +0.3 116,935 - -0.1 116,940 + -0.2 116,940 + -0.3 116,940 + +0.3 116,940 + -0.1 116,941 - -1.1 116,941 - -0.2 116,941 - -0.4 116,941 - -0.9 116,941 - -0.7 116,945 + +0.5 116,945 + +1.0 117,066 + EX28DRAFT_4312 0.17 +1.1 117,067 - EX28DRAFT_4312 0.17 +0.7 117,135 + EX28DRAFT_4312 0.34 +2.4 117,145 - EX28DRAFT_4312 0.36 -1.6 117,145 - EX28DRAFT_4312 0.36 -0.1 117,177 + EX28DRAFT_4312 0.44 -0.1 117,207 + EX28DRAFT_4312 0.51 -2.0 117,243 + EX28DRAFT_4312 0.60 -0.8 117,243 + EX28DRAFT_4312 0.60 -0.7 117,244 - EX28DRAFT_4312 0.60 -1.0 117,273 - EX28DRAFT_4312 0.67 -0.1 117,373 + +0.4 117,406 + -1.5 117,407 - +1.0 117,407 - +1.4 117,407 - -0.6 117,439 + +0.5 117,439 + +0.4 117,440 - +0.4 117,478 + -0.2 117,478 + -0.7 117,479 - +0.4 117,479 - -0.8 117,486 - +1.6 117,486 - +0.3 117,489 + -0.0 117,489 + -0.3 117,558 + EX28DRAFT_4313 0.12 +0.3 117,558 + EX28DRAFT_4313 0.12 +0.2 117,558 + EX28DRAFT_4313 0.12 -0.1 117,558 + EX28DRAFT_4313 0.12 -0.2 117,558 + EX28DRAFT_4313 0.12 +0.0 117,559 - EX28DRAFT_4313 0.12 -0.5 117,559 - EX28DRAFT_4313 0.12 +0.6 117,559 - EX28DRAFT_4313 0.12 -0.2 117,560 + EX28DRAFT_4313 0.13 -0.0 117,560 + EX28DRAFT_4313 0.13 -0.4 117,560 + EX28DRAFT_4313 0.13 +0.2 117,561 - EX28DRAFT_4313 0.13 -0.2 117,561 - EX28DRAFT_4313 0.13 +0.8 117,579 - EX28DRAFT_4313 0.17 +1.5 117,603 + EX28DRAFT_4313 0.22 -1.3 117,690 - EX28DRAFT_4313 0.41 +0.3 117,690 - EX28DRAFT_4313 0.41 +0.3 117,697 + EX28DRAFT_4313 0.43 +0.1 117,698 - EX28DRAFT_4313 0.43 -0.1 117,704 - EX28DRAFT_4313 0.44 +0.7 117,745 + EX28DRAFT_4313 0.53 +0.7 117,745 + EX28DRAFT_4313 0.53 -0.1 117,746 - EX28DRAFT_4313 0.54 +0.4 117,794 - EX28DRAFT_4313 0.64 +0.3 117,993 + +0.3 117,993 + +0.3 117,994 - -1.8 118,044 + +0.2 118,045 - -0.5 118,070 + +1.0 118,083 + +0.3 118,083 + +0.1 118,084 - +0.2 118,285 - EX28DRAFT_4314 0.12 +1.2 118,291 - EX28DRAFT_4314 0.12 +0.9
Or see this region's nucleotide sequence