Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4282 and EX28DRAFT_4283 are separated by 1 nucleotides EX28DRAFT_4283 and EX28DRAFT_4284 overlap by 4 nucleotides
EX28DRAFT_4282: EX28DRAFT_4282 - ABC-type sugar transport systems, ATPase components, at 85,885 to 86,955
_4282
EX28DRAFT_4283: EX28DRAFT_4283 - ABC-type sugar transport system, permease component, at 86,957 to 87,802
_4283
EX28DRAFT_4284: EX28DRAFT_4284 - ABC-type sugar transport systems, permease components, at 87,799 to 88,716
_4284
Position (kb) 86
87
88 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 86.288 kb on + strand, within EX28DRAFT_4282 at 86.387 kb on + strand, within EX28DRAFT_4282 at 86.387 kb on + strand, within EX28DRAFT_4282 at 86.388 kb on - strand, within EX28DRAFT_4282 at 86.703 kb on - strand, within EX28DRAFT_4282 at 87.174 kb on + strand, within EX28DRAFT_4283 at 87.175 kb on - strand, within EX28DRAFT_4283 at 87.178 kb on + strand, within EX28DRAFT_4283 at 87.178 kb on + strand, within EX28DRAFT_4283 at 87.178 kb on + strand, within EX28DRAFT_4283 at 87.360 kb on - strand, within EX28DRAFT_4283 at 87.418 kb on + strand, within EX28DRAFT_4283 at 87.541 kb on + strand, within EX28DRAFT_4283 at 87.542 kb on - strand, within EX28DRAFT_4283 at 87.720 kb on + strand at 87.721 kb on - strand at 87.763 kb on + strand at 87.763 kb on + strand at 87.764 kb on - strand at 87.816 kb on + strand at 87.828 kb on - strand at 87.934 kb on - strand, within EX28DRAFT_4284 at 87.935 kb on + strand, within EX28DRAFT_4284 at 87.936 kb on - strand, within EX28DRAFT_4284 at 87.936 kb on - strand, within EX28DRAFT_4284 at 87.940 kb on - strand, within EX28DRAFT_4284 at 88.172 kb on + strand, within EX28DRAFT_4284 at 88.172 kb on + strand, within EX28DRAFT_4284 at 88.176 kb on + strand, within EX28DRAFT_4284 at 88.176 kb on + strand, within EX28DRAFT_4284 at 88.176 kb on + strand, within EX28DRAFT_4284 at 88.177 kb on - strand, within EX28DRAFT_4284 at 88.177 kb on - strand, within EX28DRAFT_4284 at 88.343 kb on + strand, within EX28DRAFT_4284 at 88.371 kb on + strand, within EX28DRAFT_4284 at 88.391 kb on + strand, within EX28DRAFT_4284 at 88.391 kb on + strand, within EX28DRAFT_4284 at 88.391 kb on + strand, within EX28DRAFT_4284 at 88.487 kb on + strand, within EX28DRAFT_4284 at 88.487 kb on + strand, within EX28DRAFT_4284 at 88.488 kb on - strand, within EX28DRAFT_4284 at 88.488 kb on - strand, within EX28DRAFT_4284 at 88.488 kb on - strand, within EX28DRAFT_4284 at 88.600 kb on - strand, within EX28DRAFT_4284 at 88.687 kb on - strand at 88.687 kb on - strand at 88.699 kb on + strand at 88.700 kb on - strand at 88.700 kb on - strand at 88.703 kb on + strand at 88.703 kb on + strand at 88.703 kb on + strand at 88.703 kb on + strand at 88.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 86,288 + EX28DRAFT_4282 0.38 +0.1 86,387 + EX28DRAFT_4282 0.47 -0.8 86,387 + EX28DRAFT_4282 0.47 +0.4 86,388 - EX28DRAFT_4282 0.47 -0.1 86,703 - EX28DRAFT_4282 0.76 -0.3 87,174 + EX28DRAFT_4283 0.26 +0.1 87,175 - EX28DRAFT_4283 0.26 -1.0 87,178 + EX28DRAFT_4283 0.26 -0.2 87,178 + EX28DRAFT_4283 0.26 -0.7 87,178 + EX28DRAFT_4283 0.26 -1.8 87,360 - EX28DRAFT_4283 0.48 -1.0 87,418 + EX28DRAFT_4283 0.54 -0.1 87,541 + EX28DRAFT_4283 0.69 -0.6 87,542 - EX28DRAFT_4283 0.69 +0.7 87,720 + +0.0 87,721 - -0.9 87,763 + +0.1 87,763 + -0.2 87,764 - +0.6 87,816 + +1.0 87,828 - +0.1 87,934 - EX28DRAFT_4284 0.15 +1.0 87,935 + EX28DRAFT_4284 0.15 -1.1 87,936 - EX28DRAFT_4284 0.15 -0.2 87,936 - EX28DRAFT_4284 0.15 -3.1 87,940 - EX28DRAFT_4284 0.15 -0.2 88,172 + EX28DRAFT_4284 0.41 +0.2 88,172 + EX28DRAFT_4284 0.41 +0.6 88,176 + EX28DRAFT_4284 0.41 -0.2 88,176 + EX28DRAFT_4284 0.41 +0.0 88,176 + EX28DRAFT_4284 0.41 +0.0 88,177 - EX28DRAFT_4284 0.41 -0.2 88,177 - EX28DRAFT_4284 0.41 +0.5 88,343 + EX28DRAFT_4284 0.59 -0.7 88,371 + EX28DRAFT_4284 0.62 -0.1 88,391 + EX28DRAFT_4284 0.64 -0.1 88,391 + EX28DRAFT_4284 0.64 +0.7 88,391 + EX28DRAFT_4284 0.64 +0.4 88,487 + EX28DRAFT_4284 0.75 +0.1 88,487 + EX28DRAFT_4284 0.75 -0.2 88,488 - EX28DRAFT_4284 0.75 +0.1 88,488 - EX28DRAFT_4284 0.75 +0.4 88,488 - EX28DRAFT_4284 0.75 -0.8 88,600 - EX28DRAFT_4284 0.87 +0.4 88,687 - -0.3 88,687 - +0.1 88,699 + -0.7 88,700 - -1.3 88,700 - +0.1 88,703 + -0.4 88,703 + +0.3 88,703 + +1.3 88,703 + -0.2 88,704 - -0.4
Or see this region's nucleotide sequence