Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4279 and EX28DRAFT_4280 are separated by 123 nucleotides EX28DRAFT_4280 and EX28DRAFT_4281 overlap by 17 nucleotides EX28DRAFT_4281 and EX28DRAFT_4282 overlap by 4 nucleotides
EX28DRAFT_4279: EX28DRAFT_4279 - gamma-glutamyltranspeptidase, at 82,912 to 84,657
_4279
EX28DRAFT_4280: EX28DRAFT_4280 - Protein of unknown function (DUF2756), at 84,781 to 85,158
_4280
EX28DRAFT_4281: EX28DRAFT_4281 - Glycerophosphoryl diester phosphodiesterase, at 85,142 to 85,888
_4281
EX28DRAFT_4282: EX28DRAFT_4282 - ABC-type sugar transport systems, ATPase components, at 85,885 to 86,955
_4282
Position (kb) 85
86 Strain fitness (log2 ratio) -1
0
1 at 84.695 kb on + strand at 84.715 kb on + strand at 84.745 kb on + strand at 84.871 kb on + strand, within EX28DRAFT_4280 at 84.872 kb on - strand, within EX28DRAFT_4280 at 84.942 kb on + strand, within EX28DRAFT_4280 at 85.137 kb on + strand at 85.143 kb on + strand at 85.143 kb on + strand at 85.144 kb on - strand at 85.156 kb on + strand at 85.252 kb on - strand, within EX28DRAFT_4281 at 85.262 kb on - strand, within EX28DRAFT_4281 at 85.720 kb on + strand, within EX28DRAFT_4281 at 85.840 kb on + strand at 85.841 kb on - strand at 86.288 kb on + strand, within EX28DRAFT_4282 at 86.387 kb on + strand, within EX28DRAFT_4282 at 86.387 kb on + strand, within EX28DRAFT_4282 at 86.388 kb on - strand, within EX28DRAFT_4282 at 86.703 kb on - strand, within EX28DRAFT_4282
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 84,695 + -0.7 84,715 + -0.1 84,745 + -0.7 84,871 + EX28DRAFT_4280 0.24 +0.2 84,872 - EX28DRAFT_4280 0.24 -1.7 84,942 + EX28DRAFT_4280 0.43 +0.9 85,137 + +0.6 85,143 + +0.2 85,143 + -0.6 85,144 - -0.0 85,156 + -0.9 85,252 - EX28DRAFT_4281 0.15 +0.8 85,262 - EX28DRAFT_4281 0.16 +0.4 85,720 + EX28DRAFT_4281 0.77 -0.0 85,840 + -0.0 85,841 - +0.4 86,288 + EX28DRAFT_4282 0.38 +0.1 86,387 + EX28DRAFT_4282 0.47 -0.8 86,387 + EX28DRAFT_4282 0.47 +0.4 86,388 - EX28DRAFT_4282 0.47 -0.1 86,703 - EX28DRAFT_4282 0.76 -0.3
Or see this region's nucleotide sequence