Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4100 and EX28DRAFT_4101 overlap by 8 nucleotides EX28DRAFT_4101 and EX28DRAFT_4102 are separated by 6 nucleotides EX28DRAFT_4102 and EX28DRAFT_4103 are separated by 10 nucleotides EX28DRAFT_4103 and EX28DRAFT_4104 overlap by 20 nucleotides
EX28DRAFT_4100: EX28DRAFT_4100 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 73,888 to 75,249
_4100
EX28DRAFT_4101: EX28DRAFT_4101 - Predicted membrane protein, at 75,242 to 75,829
_4101
EX28DRAFT_4102: EX28DRAFT_4102 - Acyl carrier protein, at 75,836 to 76,087
_4102
EX28DRAFT_4103: EX28DRAFT_4103 - Acyl carrier protein, at 76,098 to 76,355
_4103
EX28DRAFT_4104: EX28DRAFT_4104 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 76,336 to 77,151
_4104
Position (kb) 75
76 Strain fitness (log2 ratio) -2
-1
0
1 at 74.586 kb on - strand, within EX28DRAFT_4100 at 74.625 kb on - strand, within EX28DRAFT_4100 at 74.627 kb on + strand, within EX28DRAFT_4100 at 74.628 kb on - strand, within EX28DRAFT_4100 at 74.727 kb on + strand, within EX28DRAFT_4100 at 75.069 kb on - strand, within EX28DRAFT_4100 at 75.130 kb on + strand at 75.130 kb on + strand at 75.196 kb on - strand at 75.267 kb on - strand at 75.321 kb on + strand, within EX28DRAFT_4101 at 75.321 kb on + strand, within EX28DRAFT_4101 at 75.321 kb on + strand, within EX28DRAFT_4101 at 75.321 kb on + strand, within EX28DRAFT_4101 at 75.321 kb on + strand, within EX28DRAFT_4101 at 75.322 kb on - strand, within EX28DRAFT_4101 at 75.322 kb on - strand, within EX28DRAFT_4101 at 75.597 kb on + strand, within EX28DRAFT_4101 at 75.648 kb on + strand, within EX28DRAFT_4101 at 75.837 kb on + strand at 75.838 kb on - strand at 75.838 kb on - strand at 75.869 kb on + strand, within EX28DRAFT_4102 at 75.870 kb on - strand, within EX28DRAFT_4102 at 76.065 kb on + strand at 76.193 kb on - strand, within EX28DRAFT_4103 at 76.233 kb on - strand, within EX28DRAFT_4103 at 76.331 kb on + strand at 76.342 kb on + strand at 76.359 kb on + strand at 76.402 kb on + strand at 76.402 kb on + strand at 76.403 kb on - strand at 76.403 kb on - strand at 76.403 kb on - strand at 76.457 kb on + strand, within EX28DRAFT_4104 at 76.458 kb on - strand, within EX28DRAFT_4104 at 76.526 kb on + strand, within EX28DRAFT_4104
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 74,586 - EX28DRAFT_4100 0.51 +0.8 74,625 - EX28DRAFT_4100 0.54 -0.2 74,627 + EX28DRAFT_4100 0.54 -0.2 74,628 - EX28DRAFT_4100 0.54 +0.7 74,727 + EX28DRAFT_4100 0.62 +0.3 75,069 - EX28DRAFT_4100 0.87 +0.8 75,130 + +0.5 75,130 + -0.7 75,196 - -1.1 75,267 - +0.1 75,321 + EX28DRAFT_4101 0.13 +0.2 75,321 + EX28DRAFT_4101 0.13 -0.2 75,321 + EX28DRAFT_4101 0.13 +0.8 75,321 + EX28DRAFT_4101 0.13 +0.0 75,321 + EX28DRAFT_4101 0.13 +0.3 75,322 - EX28DRAFT_4101 0.14 -0.4 75,322 - EX28DRAFT_4101 0.14 +0.2 75,597 + EX28DRAFT_4101 0.60 +0.9 75,648 + EX28DRAFT_4101 0.69 -0.1 75,837 + -0.3 75,838 - -0.3 75,838 - +0.1 75,869 + EX28DRAFT_4102 0.13 -2.7 75,870 - EX28DRAFT_4102 0.13 +0.5 76,065 + +0.1 76,193 - EX28DRAFT_4103 0.37 +0.2 76,233 - EX28DRAFT_4103 0.52 -0.1 76,331 + -0.1 76,342 + +0.4 76,359 + +0.5 76,402 + +0.1 76,402 + +0.6 76,403 - +1.3 76,403 - +0.3 76,403 - +0.3 76,457 + EX28DRAFT_4104 0.15 -0.5 76,458 - EX28DRAFT_4104 0.15 -0.6 76,526 + EX28DRAFT_4104 0.23 +0.2
Or see this region's nucleotide sequence