Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3656 and EX28DRAFT_3657 are separated by 128 nucleotides EX28DRAFT_3657 and EX28DRAFT_3658 are separated by 44 nucleotides EX28DRAFT_3658 and EX28DRAFT_3659 overlap by 17 nucleotides
EX28DRAFT_3656: EX28DRAFT_3656 - AraC-type DNA-binding domain-containing proteins, at 323,583 to 324,428
_3656
EX28DRAFT_3657: EX28DRAFT_3657 - Uncharacterized membrane-associated protein, at 324,557 to 325,324
_3657
EX28DRAFT_3658: EX28DRAFT_3658 - thiamine ABC transporter, ATP-binding protein, at 325,369 to 326,070
_3658
EX28DRAFT_3659: EX28DRAFT_3659 - thiamine ABC transporter, permease protein, at 326,054 to 327,664
_3659
Position (kb) 325
326
327 Strain fitness (log2 ratio) -2
-1
0
1
2 at 324.481 kb on - strand at 324.556 kb on + strand at 324.556 kb on + strand at 324.557 kb on - strand at 324.580 kb on + strand at 324.580 kb on + strand at 324.580 kb on + strand at 324.581 kb on - strand at 324.595 kb on + strand at 324.599 kb on + strand at 324.600 kb on - strand at 324.600 kb on - strand at 324.799 kb on + strand, within EX28DRAFT_3657 at 324.800 kb on - strand, within EX28DRAFT_3657 at 325.019 kb on + strand, within EX28DRAFT_3657 at 325.019 kb on + strand, within EX28DRAFT_3657 at 325.020 kb on - strand, within EX28DRAFT_3657 at 325.088 kb on - strand, within EX28DRAFT_3657 at 325.190 kb on + strand, within EX28DRAFT_3657 at 325.191 kb on - strand, within EX28DRAFT_3657 at 325.503 kb on + strand, within EX28DRAFT_3658 at 325.864 kb on - strand, within EX28DRAFT_3658 at 325.944 kb on + strand, within EX28DRAFT_3658 at 325.945 kb on - strand, within EX28DRAFT_3658 at 325.945 kb on - strand, within EX28DRAFT_3658 at 326.098 kb on + strand at 326.102 kb on + strand at 326.187 kb on + strand at 326.489 kb on + strand, within EX28DRAFT_3659 at 326.870 kb on - strand, within EX28DRAFT_3659 at 326.953 kb on - strand, within EX28DRAFT_3659 at 326.974 kb on - strand, within EX28DRAFT_3659 at 327.052 kb on + strand, within EX28DRAFT_3659
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 324,481 - -1.9 324,556 + +0.3 324,556 + +0.7 324,557 - +0.5 324,580 + -0.1 324,580 + -2.6 324,580 + -0.3 324,581 - -0.2 324,595 + -0.7 324,599 + +2.1 324,600 - +0.0 324,600 - +0.2 324,799 + EX28DRAFT_3657 0.32 -0.7 324,800 - EX28DRAFT_3657 0.32 +0.4 325,019 + EX28DRAFT_3657 0.60 +0.4 325,019 + EX28DRAFT_3657 0.60 +0.3 325,020 - EX28DRAFT_3657 0.60 +0.3 325,088 - EX28DRAFT_3657 0.69 -0.4 325,190 + EX28DRAFT_3657 0.82 +0.5 325,191 - EX28DRAFT_3657 0.83 +0.1 325,503 + EX28DRAFT_3658 0.19 +0.5 325,864 - EX28DRAFT_3658 0.71 -0.8 325,944 + EX28DRAFT_3658 0.82 -0.6 325,945 - EX28DRAFT_3658 0.82 -0.5 325,945 - EX28DRAFT_3658 0.82 -1.3 326,098 + -0.0 326,102 + +0.0 326,187 + -0.3 326,489 + EX28DRAFT_3659 0.27 +0.6 326,870 - EX28DRAFT_3659 0.51 -1.3 326,953 - EX28DRAFT_3659 0.56 +0.6 326,974 - EX28DRAFT_3659 0.57 -0.1 327,052 + EX28DRAFT_3659 0.62 -0.2
Or see this region's nucleotide sequence