Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3641 and EX28DRAFT_3642 are separated by 114 nucleotides EX28DRAFT_3642 and EX28DRAFT_3643 are separated by 39 nucleotides EX28DRAFT_3643 and EX28DRAFT_3644 are separated by 4 nucleotides EX28DRAFT_3644 and EX28DRAFT_3645 are separated by 3 nucleotides
EX28DRAFT_3641: EX28DRAFT_3641 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 302,827 to 304,692
_3641
EX28DRAFT_3642: EX28DRAFT_3642 - Dihydrofolate reductase, at 304,807 to 305,286
_3642
EX28DRAFT_3643: EX28DRAFT_3643 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 305,326 to 306,174
_3643
EX28DRAFT_3644: EX28DRAFT_3644 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 306,179 to 306,556
_3644
EX28DRAFT_3645: EX28DRAFT_3645 - ribosomal RNA small subunit methyltransferase A, at 306,560 to 307,381
_3645
Position (kb) 305
306
307 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6 at 304.439 kb on - strand, within EX28DRAFT_3641 at 304.711 kb on - strand at 304.711 kb on - strand at 304.769 kb on + strand at 305.319 kb on + strand at 305.324 kb on + strand at 305.325 kb on - strand at 305.408 kb on - strand at 305.600 kb on - strand, within EX28DRAFT_3643 at 305.877 kb on + strand, within EX28DRAFT_3643 at 306.028 kb on + strand, within EX28DRAFT_3643 at 306.165 kb on - strand at 306.165 kb on - strand at 306.168 kb on + strand at 306.169 kb on - strand at 306.169 kb on - strand at 306.169 kb on - strand at 306.169 kb on - strand at 306.169 kb on - strand at 306.169 kb on - strand at 306.313 kb on - strand, within EX28DRAFT_3644 at 306.313 kb on - strand, within EX28DRAFT_3644 at 306.318 kb on + strand, within EX28DRAFT_3644 at 306.465 kb on + strand, within EX28DRAFT_3644 at 306.514 kb on - strand, within EX28DRAFT_3644 at 306.524 kb on + strand at 306.525 kb on - strand at 306.537 kb on - strand at 306.561 kb on + strand at 306.886 kb on - strand, within EX28DRAFT_3645 at 306.886 kb on - strand, within EX28DRAFT_3645 at 306.995 kb on - strand, within EX28DRAFT_3645 at 306.997 kb on - strand, within EX28DRAFT_3645
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 304,439 - EX28DRAFT_3641 0.86 +0.1 304,711 - -0.7 304,711 - -0.1 304,769 + -0.0 305,319 + +0.6 305,324 + +0.3 305,325 - +0.7 305,408 - +5.6 305,600 - EX28DRAFT_3643 0.32 +6.3 305,877 + EX28DRAFT_3643 0.65 +5.3 306,028 + EX28DRAFT_3643 0.83 +5.7 306,165 - +4.0 306,165 - +4.3 306,168 + +6.1 306,169 - +4.1 306,169 - +4.6 306,169 - +1.6 306,169 - +4.6 306,169 - +5.5 306,169 - +3.8 306,313 - EX28DRAFT_3644 0.35 +1.6 306,313 - EX28DRAFT_3644 0.35 +1.5 306,318 + EX28DRAFT_3644 0.37 +5.8 306,465 + EX28DRAFT_3644 0.76 +5.4 306,514 - EX28DRAFT_3644 0.89 +2.1 306,524 + +4.8 306,525 - +1.7 306,537 - +1.2 306,561 + +5.8 306,886 - EX28DRAFT_3645 0.40 -2.6 306,886 - EX28DRAFT_3645 0.40 -2.9 306,995 - EX28DRAFT_3645 0.53 -2.4 306,997 - EX28DRAFT_3645 0.53 -4.3
Or see this region's nucleotide sequence