Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2363 and EX28DRAFT_2364 are separated by 159 nucleotides EX28DRAFT_2364 and EX28DRAFT_2365 are separated by 57 nucleotides EX28DRAFT_2365 and EX28DRAFT_2366 are separated by 183 nucleotides
EX28DRAFT_2363: EX28DRAFT_2363 - ABC-type sugar transport system, ATPase component, at 2,383,569 to 2,385,071
_2363
EX28DRAFT_2364: EX28DRAFT_2364 - Glycerol dehydrogenase and related enzymes, at 2,385,231 to 2,386,319
_2364
EX28DRAFT_2365: EX28DRAFT_2365 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,386,377 to 2,387,120
_2365
EX28DRAFT_2366: EX28DRAFT_2366 - Cytotoxic translational repressor of toxin-antitoxin stability system, at 2,387,304 to 2,387,609
_2366
Position (kb)
2385
2386
2387 Strain fitness (log2 ratio)
-2
-1
0
1 at 2384.329 kb on + strand, within EX28DRAFT_2363 at 2384.478 kb on - strand, within EX28DRAFT_2363 at 2384.505 kb on + strand, within EX28DRAFT_2363 at 2384.879 kb on + strand, within EX28DRAFT_2363 at 2384.880 kb on - strand, within EX28DRAFT_2363 at 2384.899 kb on + strand, within EX28DRAFT_2363 at 2384.973 kb on + strand at 2385.090 kb on - strand at 2385.172 kb on - strand at 2385.193 kb on + strand at 2385.193 kb on + strand at 2385.194 kb on - strand at 2385.214 kb on + strand at 2385.274 kb on - strand at 2385.274 kb on - strand at 2385.274 kb on - strand at 2385.351 kb on + strand, within EX28DRAFT_2364 at 2385.351 kb on + strand, within EX28DRAFT_2364 at 2385.979 kb on - strand, within EX28DRAFT_2364 at 2385.979 kb on - strand, within EX28DRAFT_2364 at 2386.044 kb on + strand, within EX28DRAFT_2364 at 2386.146 kb on - strand, within EX28DRAFT_2364 at 2386.249 kb on - strand at 2386.334 kb on + strand at 2386.334 kb on + strand at 2386.336 kb on + strand at 2386.341 kb on - strand at 2386.341 kb on - strand at 2386.354 kb on - strand at 2386.390 kb on + strand at 2386.390 kb on + strand at 2386.391 kb on - strand at 2386.391 kb on - strand at 2386.398 kb on - strand at 2386.482 kb on - strand, within EX28DRAFT_2365 at 2386.484 kb on + strand, within EX28DRAFT_2365 at 2386.484 kb on + strand, within EX28DRAFT_2365 at 2386.485 kb on - strand, within EX28DRAFT_2365 at 2386.485 kb on - strand, within EX28DRAFT_2365 at 2386.787 kb on + strand, within EX28DRAFT_2365 at 2386.824 kb on - strand, within EX28DRAFT_2365 at 2386.953 kb on - strand, within EX28DRAFT_2365 at 2387.219 kb on + strand at 2387.219 kb on + strand at 2387.252 kb on - strand at 2387.261 kb on - strand at 2387.263 kb on + strand at 2387.264 kb on - strand at 2387.288 kb on + strand at 2387.288 kb on + strand at 2387.300 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,384,329 + EX28DRAFT_2363 0.51 +0.8 2,384,478 - EX28DRAFT_2363 0.60 -0.8 2,384,505 + EX28DRAFT_2363 0.62 -1.1 2,384,879 + EX28DRAFT_2363 0.87 +1.4 2,384,880 - EX28DRAFT_2363 0.87 +0.4 2,384,899 + EX28DRAFT_2363 0.88 +1.0 2,384,973 + -0.6 2,385,090 - -0.5 2,385,172 - +0.2 2,385,193 + +0.1 2,385,193 + -1.8 2,385,194 - +0.0 2,385,214 + +0.5 2,385,274 - -0.6 2,385,274 - -0.1 2,385,274 - +1.2 2,385,351 + EX28DRAFT_2364 0.11 +0.8 2,385,351 + EX28DRAFT_2364 0.11 +1.6 2,385,979 - EX28DRAFT_2364 0.69 +0.9 2,385,979 - EX28DRAFT_2364 0.69 +0.0 2,386,044 + EX28DRAFT_2364 0.75 +0.2 2,386,146 - EX28DRAFT_2364 0.84 -0.7 2,386,249 - -0.8 2,386,334 + -0.5 2,386,334 + -1.3 2,386,336 + -0.4 2,386,341 - -0.4 2,386,341 - -0.1 2,386,354 - -0.1 2,386,390 + -0.0 2,386,390 + +0.2 2,386,391 - +0.3 2,386,391 - -0.1 2,386,398 - +0.7 2,386,482 - EX28DRAFT_2365 0.14 -0.4 2,386,484 + EX28DRAFT_2365 0.14 +0.4 2,386,484 + EX28DRAFT_2365 0.14 +0.3 2,386,485 - EX28DRAFT_2365 0.15 +0.4 2,386,485 - EX28DRAFT_2365 0.15 +0.3 2,386,787 + EX28DRAFT_2365 0.55 +1.0 2,386,824 - EX28DRAFT_2365 0.60 -0.4 2,386,953 - EX28DRAFT_2365 0.77 -0.2 2,387,219 + -0.5 2,387,219 + +1.2 2,387,252 - +1.0 2,387,261 - +0.4 2,387,263 + +0.2 2,387,264 - +0.4 2,387,288 + -0.3 2,387,288 + -0.2 2,387,300 - -0.2
Or see this region's nucleotide sequence