Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2136 and EX28DRAFT_2137 are separated by 182 nucleotides EX28DRAFT_2137 and EX28DRAFT_2138 are separated by 1 nucleotides EX28DRAFT_2138 and EX28DRAFT_2139 are separated by 89 nucleotides
EX28DRAFT_2136: EX28DRAFT_2136 - Asparaginase, at 2,156,068 to 2,157,012
_2136
EX28DRAFT_2137: EX28DRAFT_2137 - molybdenum cofactor synthesis domain, at 2,157,195 to 2,158,427
_2137
EX28DRAFT_2138: EX28DRAFT_2138 - molybdopterin synthase sulfurylase MoeB, at 2,158,429 to 2,159,181
_2138
EX28DRAFT_2139: EX28DRAFT_2139 - fructose-6-phosphate aldolase, TalC/MipB family, at 2,159,271 to 2,159,933
_2139
Position (kb)
2157
2158
2159 Strain fitness (log2 ratio)
-2
-1
0
1 at 2156.249 kb on - strand, within EX28DRAFT_2136 at 2156.282 kb on + strand, within EX28DRAFT_2136 at 2156.354 kb on + strand, within EX28DRAFT_2136 at 2156.355 kb on - strand, within EX28DRAFT_2136 at 2156.809 kb on - strand, within EX28DRAFT_2136 at 2156.809 kb on - strand, within EX28DRAFT_2136 at 2156.910 kb on - strand, within EX28DRAFT_2136 at 2156.925 kb on - strand at 2157.044 kb on + strand at 2157.044 kb on + strand at 2157.089 kb on - strand at 2157.089 kb on - strand at 2157.098 kb on + strand at 2157.098 kb on + strand at 2157.098 kb on + strand at 2157.098 kb on + strand at 2157.099 kb on - strand at 2157.099 kb on - strand at 2157.117 kb on - strand at 2157.117 kb on - strand at 2157.117 kb on - strand at 2157.132 kb on + strand at 2157.158 kb on - strand at 2157.308 kb on + strand at 2157.308 kb on + strand at 2157.383 kb on - strand, within EX28DRAFT_2137 at 2157.620 kb on + strand, within EX28DRAFT_2137 at 2157.621 kb on - strand, within EX28DRAFT_2137 at 2157.798 kb on + strand, within EX28DRAFT_2137 at 2157.972 kb on + strand, within EX28DRAFT_2137 at 2157.973 kb on - strand, within EX28DRAFT_2137 at 2158.396 kb on + strand at 2158.397 kb on - strand at 2158.465 kb on + strand at 2158.577 kb on - strand, within EX28DRAFT_2138 at 2158.577 kb on - strand, within EX28DRAFT_2138 at 2158.687 kb on - strand, within EX28DRAFT_2138 at 2159.075 kb on - strand, within EX28DRAFT_2138 at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.107 kb on + strand at 2159.108 kb on - strand at 2159.108 kb on - strand at 2159.348 kb on + strand, within EX28DRAFT_2139 at 2159.351 kb on + strand, within EX28DRAFT_2139 at 2159.384 kb on + strand, within EX28DRAFT_2139
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,156,249 - EX28DRAFT_2136 0.19 +0.5 2,156,282 + EX28DRAFT_2136 0.23 -0.0 2,156,354 + EX28DRAFT_2136 0.30 -0.1 2,156,355 - EX28DRAFT_2136 0.30 +0.6 2,156,809 - EX28DRAFT_2136 0.78 +0.3 2,156,809 - EX28DRAFT_2136 0.78 -0.1 2,156,910 - EX28DRAFT_2136 0.89 -0.4 2,156,925 - -0.1 2,157,044 + +0.2 2,157,044 + -0.5 2,157,089 - +1.5 2,157,089 - +0.2 2,157,098 + -0.2 2,157,098 + -1.2 2,157,098 + -0.8 2,157,098 + -0.6 2,157,099 - +1.3 2,157,099 - +0.4 2,157,117 - +0.6 2,157,117 - +1.2 2,157,117 - -0.3 2,157,132 + -0.2 2,157,158 - +0.8 2,157,308 + -2.1 2,157,308 + +0.1 2,157,383 - EX28DRAFT_2137 0.15 +0.5 2,157,620 + EX28DRAFT_2137 0.34 -0.8 2,157,621 - EX28DRAFT_2137 0.35 +0.2 2,157,798 + EX28DRAFT_2137 0.49 -0.3 2,157,972 + EX28DRAFT_2137 0.63 -1.1 2,157,973 - EX28DRAFT_2137 0.63 -0.1 2,158,396 + -0.6 2,158,397 - +0.1 2,158,465 + +0.1 2,158,577 - EX28DRAFT_2138 0.20 -0.3 2,158,577 - EX28DRAFT_2138 0.20 +0.6 2,158,687 - EX28DRAFT_2138 0.34 -0.8 2,159,075 - EX28DRAFT_2138 0.86 -0.5 2,159,107 + -0.2 2,159,107 + -0.7 2,159,107 + +0.1 2,159,107 + -1.9 2,159,107 + -0.4 2,159,107 + -0.5 2,159,107 + +0.3 2,159,107 + -0.5 2,159,108 - +0.1 2,159,108 - -0.1 2,159,348 + EX28DRAFT_2139 0.12 -0.6 2,159,351 + EX28DRAFT_2139 0.12 -0.2 2,159,384 + EX28DRAFT_2139 0.17 +0.4
Or see this region's nucleotide sequence