Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1466 and EX28DRAFT_1467 are separated by 253 nucleotides EX28DRAFT_1467 and EX28DRAFT_1468 are separated by 123 nucleotides EX28DRAFT_1468 and EX28DRAFT_1469 are separated by 203 nucleotides EX28DRAFT_1469 and EX28DRAFT_1470 overlap by 1 nucleotides
EX28DRAFT_1466: EX28DRAFT_1466 - Lactoylglutathione lyase and related lyases, at 1,480,161 to 1,480,586
_1466
EX28DRAFT_1467: EX28DRAFT_1467 - hypothetical protein, at 1,480,840 to 1,481,388
_1467
EX28DRAFT_1468: EX28DRAFT_1468 - Outer membrane protein V, at 1,481,512 to 1,482,348
_1468
EX28DRAFT_1469: EX28DRAFT_1469 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 1,482,552 to 1,483,229
_1469
EX28DRAFT_1470: EX28DRAFT_1470 - Signal transduction histidine kinase, at 1,483,229 to 1,484,617
_1470
Position (kb)
1481
1482
1483 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1480.566 kb on + strand at 1480.566 kb on + strand at 1480.576 kb on + strand at 1480.576 kb on + strand at 1480.576 kb on + strand at 1480.577 kb on - strand at 1480.624 kb on + strand at 1480.625 kb on - strand at 1480.625 kb on - strand at 1480.625 kb on - strand at 1480.639 kb on - strand at 1480.715 kb on - strand at 1480.766 kb on + strand at 1480.766 kb on + strand at 1480.766 kb on + strand at 1480.767 kb on - strand at 1480.767 kb on - strand at 1481.058 kb on + strand, within EX28DRAFT_1467 at 1481.068 kb on + strand, within EX28DRAFT_1467 at 1481.069 kb on - strand, within EX28DRAFT_1467 at 1481.189 kb on + strand, within EX28DRAFT_1467 at 1481.190 kb on - strand, within EX28DRAFT_1467 at 1481.190 kb on - strand, within EX28DRAFT_1467 at 1481.281 kb on + strand, within EX28DRAFT_1467 at 1481.283 kb on + strand, within EX28DRAFT_1467 at 1481.283 kb on + strand, within EX28DRAFT_1467 at 1481.285 kb on + strand, within EX28DRAFT_1467 at 1481.285 kb on + strand, within EX28DRAFT_1467 at 1481.286 kb on - strand, within EX28DRAFT_1467 at 1481.286 kb on - strand, within EX28DRAFT_1467 at 1481.287 kb on + strand, within EX28DRAFT_1467 at 1481.288 kb on - strand, within EX28DRAFT_1467 at 1481.387 kb on - strand at 1481.463 kb on + strand at 1481.464 kb on - strand at 1481.523 kb on - strand at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.744 kb on + strand, within EX28DRAFT_1468 at 1481.745 kb on - strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.755 kb on - strand, within EX28DRAFT_1468 at 1481.755 kb on - strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.757 kb on - strand, within EX28DRAFT_1468 at 1481.757 kb on - strand, within EX28DRAFT_1468 at 1481.814 kb on + strand, within EX28DRAFT_1468 at 1481.816 kb on + strand, within EX28DRAFT_1468 at 1481.953 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.016 kb on - strand, within EX28DRAFT_1468 at 1482.053 kb on + strand, within EX28DRAFT_1468 at 1482.053 kb on + strand, within EX28DRAFT_1468 at 1482.128 kb on + strand, within EX28DRAFT_1468 at 1482.324 kb on + strand at 1482.435 kb on + strand at 1482.436 kb on - strand at 1482.514 kb on + strand at 1482.515 kb on - strand at 1482.540 kb on - strand at 1482.540 kb on - strand at 1482.540 kb on - strand at 1482.546 kb on - strand at 1482.546 kb on - strand at 1482.565 kb on + strand at 1482.566 kb on - strand at 1482.635 kb on - strand, within EX28DRAFT_1469 at 1482.843 kb on + strand, within EX28DRAFT_1469 at 1482.861 kb on - strand, within EX28DRAFT_1469 at 1482.861 kb on - strand, within EX28DRAFT_1469 at 1482.910 kb on - strand, within EX28DRAFT_1469 at 1482.994 kb on + strand, within EX28DRAFT_1469 at 1482.995 kb on - strand, within EX28DRAFT_1469 at 1483.059 kb on - strand, within EX28DRAFT_1469 at 1483.279 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,480,566 + +0.4 1,480,566 + -0.5 1,480,576 + +0.4 1,480,576 + -0.8 1,480,576 + +0.4 1,480,577 - -0.2 1,480,624 + +0.5 1,480,625 - -0.3 1,480,625 - -0.3 1,480,625 - -0.4 1,480,639 - +0.2 1,480,715 - -1.0 1,480,766 + -0.5 1,480,766 + +1.0 1,480,766 + +0.3 1,480,767 - +0.1 1,480,767 - -1.4 1,481,058 + EX28DRAFT_1467 0.40 +0.1 1,481,068 + EX28DRAFT_1467 0.42 -0.1 1,481,069 - EX28DRAFT_1467 0.42 -0.3 1,481,189 + EX28DRAFT_1467 0.64 -0.2 1,481,190 - EX28DRAFT_1467 0.64 -0.4 1,481,190 - EX28DRAFT_1467 0.64 -0.6 1,481,281 + EX28DRAFT_1467 0.80 +0.0 1,481,283 + EX28DRAFT_1467 0.81 +0.1 1,481,283 + EX28DRAFT_1467 0.81 -1.6 1,481,285 + EX28DRAFT_1467 0.81 -0.3 1,481,285 + EX28DRAFT_1467 0.81 -0.4 1,481,286 - EX28DRAFT_1467 0.81 -0.3 1,481,286 - EX28DRAFT_1467 0.81 +0.1 1,481,287 + EX28DRAFT_1467 0.81 +0.1 1,481,288 - EX28DRAFT_1467 0.82 -0.6 1,481,387 - +0.6 1,481,463 + -0.2 1,481,464 - -0.4 1,481,523 - +0.5 1,481,675 + EX28DRAFT_1468 0.19 +0.2 1,481,675 + EX28DRAFT_1468 0.19 +0.0 1,481,675 + EX28DRAFT_1468 0.19 +0.0 1,481,675 + EX28DRAFT_1468 0.19 +0.7 1,481,744 + EX28DRAFT_1468 0.28 -0.4 1,481,745 - EX28DRAFT_1468 0.28 -0.1 1,481,754 + EX28DRAFT_1468 0.29 -1.9 1,481,754 + EX28DRAFT_1468 0.29 -1.6 1,481,754 + EX28DRAFT_1468 0.29 -0.1 1,481,755 - EX28DRAFT_1468 0.29 -0.2 1,481,755 - EX28DRAFT_1468 0.29 -0.7 1,481,756 + EX28DRAFT_1468 0.29 +0.4 1,481,756 + EX28DRAFT_1468 0.29 +1.2 1,481,756 + EX28DRAFT_1468 0.29 +1.0 1,481,756 + EX28DRAFT_1468 0.29 +0.3 1,481,756 + EX28DRAFT_1468 0.29 +0.3 1,481,756 + EX28DRAFT_1468 0.29 +2.3 1,481,756 + EX28DRAFT_1468 0.29 +0.0 1,481,757 - EX28DRAFT_1468 0.29 +0.9 1,481,757 - EX28DRAFT_1468 0.29 +0.8 1,481,814 + EX28DRAFT_1468 0.36 +0.7 1,481,816 + EX28DRAFT_1468 0.36 +0.2 1,481,953 + EX28DRAFT_1468 0.53 +0.4 1,482,007 + EX28DRAFT_1468 0.59 +0.6 1,482,007 + EX28DRAFT_1468 0.59 +0.8 1,482,007 + EX28DRAFT_1468 0.59 +0.3 1,482,016 - EX28DRAFT_1468 0.60 -1.4 1,482,053 + EX28DRAFT_1468 0.65 +0.9 1,482,053 + EX28DRAFT_1468 0.65 +0.0 1,482,128 + EX28DRAFT_1468 0.74 -0.7 1,482,324 + -0.1 1,482,435 + -0.9 1,482,436 - +0.6 1,482,514 + +0.5 1,482,515 - +0.5 1,482,540 - +0.2 1,482,540 - -0.9 1,482,540 - +0.3 1,482,546 - +0.3 1,482,546 - +0.6 1,482,565 + +0.2 1,482,566 - +0.1 1,482,635 - EX28DRAFT_1469 0.12 -0.0 1,482,843 + EX28DRAFT_1469 0.43 -0.4 1,482,861 - EX28DRAFT_1469 0.46 +0.9 1,482,861 - EX28DRAFT_1469 0.46 +0.5 1,482,910 - EX28DRAFT_1469 0.53 -0.8 1,482,994 + EX28DRAFT_1469 0.65 +0.1 1,482,995 - EX28DRAFT_1469 0.65 -0.1 1,483,059 - EX28DRAFT_1469 0.75 -0.1 1,483,279 + +1.6
Or see this region's nucleotide sequence