Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1229 and EX28DRAFT_1230 overlap by 4 nucleotides EX28DRAFT_1230 and EX28DRAFT_1231 are separated by 135 nucleotides
EX28DRAFT_1229: EX28DRAFT_1229 - peptidase T, at 1,247,579 to 1,248,808
_1229
EX28DRAFT_1230: EX28DRAFT_1230 - tellurite resistance protein TehB, at 1,248,805 to 1,249,398
_1230
EX28DRAFT_1231: EX28DRAFT_1231 - Bacterial transferase hexapeptide (six repeats), at 1,249,534 to 1,250,514
_1231
Position (kb)
1248
1249
1250 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1247.815 kb on + strand, within EX28DRAFT_1229 at 1248.013 kb on + strand, within EX28DRAFT_1229 at 1248.368 kb on + strand, within EX28DRAFT_1229 at 1248.368 kb on + strand, within EX28DRAFT_1229 at 1248.369 kb on - strand, within EX28DRAFT_1229 at 1248.369 kb on - strand, within EX28DRAFT_1229 at 1248.369 kb on - strand, within EX28DRAFT_1229 at 1248.370 kb on + strand, within EX28DRAFT_1229 at 1248.371 kb on - strand, within EX28DRAFT_1229 at 1248.538 kb on + strand, within EX28DRAFT_1229 at 1248.539 kb on - strand, within EX28DRAFT_1229 at 1248.542 kb on + strand, within EX28DRAFT_1229 at 1248.542 kb on + strand, within EX28DRAFT_1229 at 1248.543 kb on - strand, within EX28DRAFT_1229 at 1248.550 kb on + strand, within EX28DRAFT_1229 at 1248.924 kb on - strand, within EX28DRAFT_1230 at 1248.927 kb on - strand, within EX28DRAFT_1230 at 1249.115 kb on + strand, within EX28DRAFT_1230 at 1249.149 kb on + strand, within EX28DRAFT_1230 at 1249.163 kb on - strand, within EX28DRAFT_1230 at 1249.365 kb on - strand at 1249.379 kb on + strand at 1249.380 kb on - strand at 1249.420 kb on - strand at 1249.505 kb on + strand at 1249.509 kb on + strand at 1249.510 kb on - strand at 1249.529 kb on + strand at 1249.594 kb on - strand at 1249.807 kb on - strand, within EX28DRAFT_1231 at 1249.997 kb on - strand, within EX28DRAFT_1231 at 1250.129 kb on + strand, within EX28DRAFT_1231 at 1250.129 kb on + strand, within EX28DRAFT_1231 at 1250.129 kb on + strand, within EX28DRAFT_1231 at 1250.130 kb on - strand, within EX28DRAFT_1231 at 1250.133 kb on + strand, within EX28DRAFT_1231 at 1250.133 kb on + strand, within EX28DRAFT_1231 at 1250.134 kb on - strand, within EX28DRAFT_1231 at 1250.164 kb on + strand, within EX28DRAFT_1231 at 1250.165 kb on - strand, within EX28DRAFT_1231
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,247,815 + EX28DRAFT_1229 0.19 -0.0 1,248,013 + EX28DRAFT_1229 0.35 -0.2 1,248,368 + EX28DRAFT_1229 0.64 +1.2 1,248,368 + EX28DRAFT_1229 0.64 +0.4 1,248,369 - EX28DRAFT_1229 0.64 -0.0 1,248,369 - EX28DRAFT_1229 0.64 -0.9 1,248,369 - EX28DRAFT_1229 0.64 +0.3 1,248,370 + EX28DRAFT_1229 0.64 +0.2 1,248,371 - EX28DRAFT_1229 0.64 -2.1 1,248,538 + EX28DRAFT_1229 0.78 -0.5 1,248,539 - EX28DRAFT_1229 0.78 +0.1 1,248,542 + EX28DRAFT_1229 0.78 +0.4 1,248,542 + EX28DRAFT_1229 0.78 +1.8 1,248,543 - EX28DRAFT_1229 0.78 +0.7 1,248,550 + EX28DRAFT_1229 0.79 +0.9 1,248,924 - EX28DRAFT_1230 0.20 -0.1 1,248,927 - EX28DRAFT_1230 0.21 -0.0 1,249,115 + EX28DRAFT_1230 0.52 +0.6 1,249,149 + EX28DRAFT_1230 0.58 +2.3 1,249,163 - EX28DRAFT_1230 0.60 +0.1 1,249,365 - +0.1 1,249,379 + +1.3 1,249,380 - +0.2 1,249,420 - +0.4 1,249,505 + +0.2 1,249,509 + +0.1 1,249,510 - +0.3 1,249,529 + -0.1 1,249,594 - +0.2 1,249,807 - EX28DRAFT_1231 0.28 -1.6 1,249,997 - EX28DRAFT_1231 0.47 -0.5 1,250,129 + EX28DRAFT_1231 0.61 +0.5 1,250,129 + EX28DRAFT_1231 0.61 -0.5 1,250,129 + EX28DRAFT_1231 0.61 -1.0 1,250,130 - EX28DRAFT_1231 0.61 -0.1 1,250,133 + EX28DRAFT_1231 0.61 +0.2 1,250,133 + EX28DRAFT_1231 0.61 +0.4 1,250,134 - EX28DRAFT_1231 0.61 -0.4 1,250,164 + EX28DRAFT_1231 0.64 +0.6 1,250,165 - EX28DRAFT_1231 0.64 +0.7
Or see this region's nucleotide sequence