Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0995 and EX28DRAFT_0996 are separated by 275 nucleotides EX28DRAFT_0996 and EX28DRAFT_0997 are separated by 107 nucleotides
EX28DRAFT_0995: EX28DRAFT_0995 - Domain of unknown function (DUF4432), at 998,383 to 999,591
_0995
EX28DRAFT_0996: EX28DRAFT_0996 - Peroxiredoxin, at 999,867 to 1,000,373
_0996
EX28DRAFT_0997: EX28DRAFT_0997 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 1,000,481 to 1,001,446
_0997
Position (kb)
999
1000
1001 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 998.909 kb on + strand, within EX28DRAFT_0995 at 998.910 kb on - strand, within EX28DRAFT_0995 at 998.910 kb on - strand, within EX28DRAFT_0995 at 998.910 kb on - strand, within EX28DRAFT_0995 at 998.990 kb on + strand, within EX28DRAFT_0995 at 998.990 kb on + strand, within EX28DRAFT_0995 at 998.991 kb on - strand, within EX28DRAFT_0995 at 999.028 kb on - strand, within EX28DRAFT_0995 at 999.114 kb on + strand, within EX28DRAFT_0995 at 999.114 kb on + strand, within EX28DRAFT_0995 at 999.141 kb on - strand, within EX28DRAFT_0995 at 999.182 kb on + strand, within EX28DRAFT_0995 at 999.252 kb on + strand, within EX28DRAFT_0995 at 999.252 kb on + strand, within EX28DRAFT_0995 at 999.253 kb on - strand, within EX28DRAFT_0995 at 999.253 kb on - strand, within EX28DRAFT_0995 at 999.254 kb on + strand, within EX28DRAFT_0995 at 999.254 kb on + strand, within EX28DRAFT_0995 at 999.255 kb on - strand, within EX28DRAFT_0995 at 999.317 kb on - strand, within EX28DRAFT_0995 at 999.317 kb on - strand, within EX28DRAFT_0995 at 999.378 kb on + strand, within EX28DRAFT_0995 at 999.593 kb on + strand at 999.847 kb on + strand at 999.849 kb on + strand at 999.850 kb on - strand at 999.865 kb on + strand at 1000.064 kb on + strand, within EX28DRAFT_0996 at 1000.065 kb on - strand, within EX28DRAFT_0996 at 1000.175 kb on + strand, within EX28DRAFT_0996 at 1000.289 kb on + strand, within EX28DRAFT_0996 at 1000.373 kb on + strand at 1000.373 kb on + strand at 1000.374 kb on - strand at 1000.374 kb on - strand at 1000.374 kb on - strand at 1000.374 kb on - strand at 1000.377 kb on + strand at 1000.378 kb on - strand at 1000.390 kb on - strand at 1000.393 kb on + strand at 1000.393 kb on + strand at 1000.394 kb on - strand at 1000.394 kb on - strand at 1000.395 kb on + strand at 1000.396 kb on - strand at 1000.396 kb on - strand at 1000.396 kb on - strand at 1000.416 kb on + strand at 1000.416 kb on + strand at 1000.417 kb on - strand at 1000.500 kb on - strand at 1000.523 kb on - strand at 1000.615 kb on + strand, within EX28DRAFT_0997 at 1000.616 kb on - strand, within EX28DRAFT_0997 at 1000.664 kb on - strand, within EX28DRAFT_0997
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 998,909 + EX28DRAFT_0995 0.44 +0.1 998,910 - EX28DRAFT_0995 0.44 -1.5 998,910 - EX28DRAFT_0995 0.44 -0.8 998,910 - EX28DRAFT_0995 0.44 +0.1 998,990 + EX28DRAFT_0995 0.50 -0.4 998,990 + EX28DRAFT_0995 0.50 +0.7 998,991 - EX28DRAFT_0995 0.50 -0.1 999,028 - EX28DRAFT_0995 0.53 +1.1 999,114 + EX28DRAFT_0995 0.60 +0.1 999,114 + EX28DRAFT_0995 0.60 +0.4 999,141 - EX28DRAFT_0995 0.63 +0.5 999,182 + EX28DRAFT_0995 0.66 +0.6 999,252 + EX28DRAFT_0995 0.72 +0.1 999,252 + EX28DRAFT_0995 0.72 -0.1 999,253 - EX28DRAFT_0995 0.72 -0.9 999,253 - EX28DRAFT_0995 0.72 -0.3 999,254 + EX28DRAFT_0995 0.72 +0.2 999,254 + EX28DRAFT_0995 0.72 -0.1 999,255 - EX28DRAFT_0995 0.72 -0.1 999,317 - EX28DRAFT_0995 0.77 +0.5 999,317 - EX28DRAFT_0995 0.77 -0.4 999,378 + EX28DRAFT_0995 0.82 -0.3 999,593 + +0.5 999,847 + +1.9 999,849 + +0.2 999,850 - -1.3 999,865 + -0.0 1,000,064 + EX28DRAFT_0996 0.39 -0.6 1,000,065 - EX28DRAFT_0996 0.39 -0.7 1,000,175 + EX28DRAFT_0996 0.61 +0.1 1,000,289 + EX28DRAFT_0996 0.83 -0.7 1,000,373 + -0.1 1,000,373 + -0.1 1,000,374 - -1.5 1,000,374 - -0.3 1,000,374 - +0.5 1,000,374 - -0.7 1,000,377 + -0.5 1,000,378 - -1.9 1,000,390 - -0.5 1,000,393 + +0.1 1,000,393 + -0.3 1,000,394 - +0.7 1,000,394 - -0.1 1,000,395 + +0.5 1,000,396 - +1.2 1,000,396 - -0.1 1,000,396 - +0.3 1,000,416 + +0.4 1,000,416 + -1.6 1,000,417 - +0.7 1,000,500 - +0.1 1,000,523 - +0.1 1,000,615 + EX28DRAFT_0997 0.14 +0.1 1,000,616 - EX28DRAFT_0997 0.14 -0.4 1,000,664 - EX28DRAFT_0997 0.19 -0.2
Or see this region's nucleotide sequence