Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0917 and EX28DRAFT_0918 are separated by 76 nucleotides EX28DRAFT_0918 and EX28DRAFT_0919 are separated by 162 nucleotides
EX28DRAFT_0917: EX28DRAFT_0917 - Phage protein D, at 919,016 to 920,185
_0917
EX28DRAFT_0918: EX28DRAFT_0918 - Ogr/Delta-like zinc finger, at 920,262 to 920,483
_0918
EX28DRAFT_0919: EX28DRAFT_0919 - hypothetical protein, at 920,646 to 921,272
_0919
Position (kb) 920
921 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 919.312 kb on + strand, within EX28DRAFT_0917 at 919.351 kb on + strand, within EX28DRAFT_0917 at 919.430 kb on - strand, within EX28DRAFT_0917 at 919.685 kb on + strand, within EX28DRAFT_0917 at 919.686 kb on - strand, within EX28DRAFT_0917 at 919.686 kb on - strand, within EX28DRAFT_0917 at 919.686 kb on - strand, within EX28DRAFT_0917 at 919.759 kb on + strand, within EX28DRAFT_0917 at 919.760 kb on - strand, within EX28DRAFT_0917 at 919.825 kb on + strand, within EX28DRAFT_0917 at 919.907 kb on + strand, within EX28DRAFT_0917 at 919.908 kb on - strand, within EX28DRAFT_0917 at 920.014 kb on - strand, within EX28DRAFT_0917 at 920.059 kb on - strand, within EX28DRAFT_0917 at 920.059 kb on - strand, within EX28DRAFT_0917 at 920.114 kb on + strand at 920.381 kb on - strand, within EX28DRAFT_0918 at 920.395 kb on + strand, within EX28DRAFT_0918 at 920.488 kb on + strand at 920.489 kb on - strand at 920.489 kb on - strand at 920.565 kb on + strand at 920.573 kb on - strand at 920.672 kb on - strand at 920.673 kb on + strand at 920.741 kb on + strand, within EX28DRAFT_0919 at 920.945 kb on + strand, within EX28DRAFT_0919 at 920.964 kb on + strand, within EX28DRAFT_0919 at 920.965 kb on - strand, within EX28DRAFT_0919 at 920.965 kb on - strand, within EX28DRAFT_0919 at 920.997 kb on - strand, within EX28DRAFT_0919 at 921.010 kb on - strand, within EX28DRAFT_0919 at 921.064 kb on + strand, within EX28DRAFT_0919 at 921.086 kb on + strand, within EX28DRAFT_0919 at 921.104 kb on + strand, within EX28DRAFT_0919 at 921.129 kb on - strand, within EX28DRAFT_0919 at 921.129 kb on - strand, within EX28DRAFT_0919 at 921.151 kb on + strand, within EX28DRAFT_0919 at 921.151 kb on + strand, within EX28DRAFT_0919 at 921.152 kb on - strand, within EX28DRAFT_0919 at 921.152 kb on - strand, within EX28DRAFT_0919 at 921.152 kb on - strand, within EX28DRAFT_0919 at 921.161 kb on - strand, within EX28DRAFT_0919 at 921.161 kb on - strand, within EX28DRAFT_0919 at 921.161 kb on - strand, within EX28DRAFT_0919 at 921.166 kb on + strand, within EX28DRAFT_0919 at 921.196 kb on + strand, within EX28DRAFT_0919 at 921.234 kb on + strand at 921.235 kb on - strand at 921.304 kb on + strand at 921.305 kb on - strand at 921.305 kb on - strand at 921.437 kb on + strand at 921.437 kb on + strand at 921.452 kb on + strand at 921.452 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 919,312 + EX28DRAFT_0917 0.25 +0.4 919,351 + EX28DRAFT_0917 0.29 -0.6 919,430 - EX28DRAFT_0917 0.35 -0.8 919,685 + EX28DRAFT_0917 0.57 -2.0 919,686 - EX28DRAFT_0917 0.57 -0.7 919,686 - EX28DRAFT_0917 0.57 -0.5 919,686 - EX28DRAFT_0917 0.57 +0.0 919,759 + EX28DRAFT_0917 0.64 -0.1 919,760 - EX28DRAFT_0917 0.64 +0.3 919,825 + EX28DRAFT_0917 0.69 -3.2 919,907 + EX28DRAFT_0917 0.76 +0.3 919,908 - EX28DRAFT_0917 0.76 -1.0 920,014 - EX28DRAFT_0917 0.85 +0.2 920,059 - EX28DRAFT_0917 0.89 -0.1 920,059 - EX28DRAFT_0917 0.89 -0.9 920,114 + -4.7 920,381 - EX28DRAFT_0918 0.54 -2.7 920,395 + EX28DRAFT_0918 0.60 -0.8 920,488 + +0.6 920,489 - -3.8 920,489 - +0.2 920,565 + -0.6 920,573 - -0.2 920,672 - +0.7 920,673 + +0.6 920,741 + EX28DRAFT_0919 0.15 -0.3 920,945 + EX28DRAFT_0919 0.48 -0.9 920,964 + EX28DRAFT_0919 0.51 -1.0 920,965 - EX28DRAFT_0919 0.51 -1.1 920,965 - EX28DRAFT_0919 0.51 +1.3 920,997 - EX28DRAFT_0919 0.56 +0.4 921,010 - EX28DRAFT_0919 0.58 +0.5 921,064 + EX28DRAFT_0919 0.67 +0.0 921,086 + EX28DRAFT_0919 0.70 +0.6 921,104 + EX28DRAFT_0919 0.73 +0.2 921,129 - EX28DRAFT_0919 0.77 -1.0 921,129 - EX28DRAFT_0919 0.77 -0.1 921,151 + EX28DRAFT_0919 0.81 -0.5 921,151 + EX28DRAFT_0919 0.81 -0.4 921,152 - EX28DRAFT_0919 0.81 -1.0 921,152 - EX28DRAFT_0919 0.81 +0.2 921,152 - EX28DRAFT_0919 0.81 -0.8 921,161 - EX28DRAFT_0919 0.82 +0.3 921,161 - EX28DRAFT_0919 0.82 +0.8 921,161 - EX28DRAFT_0919 0.82 -0.4 921,166 + EX28DRAFT_0919 0.83 +0.7 921,196 + EX28DRAFT_0919 0.88 +0.8 921,234 + -0.6 921,235 - -2.4 921,304 + -0.4 921,305 - -0.6 921,305 - -0.1 921,437 + +0.1 921,437 + +0.2 921,452 + +0.0 921,452 + -0.8
Or see this region's nucleotide sequence