Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0812 and EX28DRAFT_0813 are separated by 75 nucleotides EX28DRAFT_0813 and EX28DRAFT_0814 are separated by 3 nucleotides
EX28DRAFT_0812: EX28DRAFT_0812 - hypothetical protein, at 815,278 to 816,354
_0812
EX28DRAFT_0813: EX28DRAFT_0813 - Uncharacterized conserved protein, at 816,430 to 816,870
_0813
EX28DRAFT_0814: EX28DRAFT_0814 - RHS repeat-associated core domain, at 816,874 to 821,232
_0814
Position (kb) 816
817 Strain fitness (log2 ratio) -2
-1
0
1 at 815.447 kb on - strand, within EX28DRAFT_0812 at 815.620 kb on - strand, within EX28DRAFT_0812 at 815.641 kb on - strand, within EX28DRAFT_0812 at 815.644 kb on - strand, within EX28DRAFT_0812 at 815.644 kb on - strand, within EX28DRAFT_0812 at 815.655 kb on + strand, within EX28DRAFT_0812 at 815.656 kb on - strand, within EX28DRAFT_0812 at 815.818 kb on + strand, within EX28DRAFT_0812 at 815.818 kb on + strand, within EX28DRAFT_0812 at 815.819 kb on - strand, within EX28DRAFT_0812 at 815.819 kb on - strand, within EX28DRAFT_0812 at 815.819 kb on - strand, within EX28DRAFT_0812 at 815.824 kb on + strand, within EX28DRAFT_0812 at 815.824 kb on + strand, within EX28DRAFT_0812 at 815.824 kb on + strand, within EX28DRAFT_0812 at 815.824 kb on + strand, within EX28DRAFT_0812 at 815.825 kb on - strand, within EX28DRAFT_0812 at 815.826 kb on + strand, within EX28DRAFT_0812 at 815.849 kb on + strand, within EX28DRAFT_0812 at 815.886 kb on + strand, within EX28DRAFT_0812 at 815.886 kb on + strand, within EX28DRAFT_0812 at 815.911 kb on - strand, within EX28DRAFT_0812 at 815.964 kb on - strand, within EX28DRAFT_0812 at 815.964 kb on - strand, within EX28DRAFT_0812 at 815.990 kb on + strand, within EX28DRAFT_0812 at 815.994 kb on + strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.037 kb on - strand, within EX28DRAFT_0812 at 816.042 kb on - strand, within EX28DRAFT_0812 at 816.042 kb on - strand, within EX28DRAFT_0812 at 816.187 kb on - strand, within EX28DRAFT_0812 at 816.187 kb on - strand, within EX28DRAFT_0812 at 816.247 kb on + strand at 816.271 kb on - strand at 816.281 kb on - strand at 816.323 kb on + strand at 816.352 kb on + strand at 816.356 kb on - strand at 816.407 kb on + strand at 816.410 kb on + strand at 816.429 kb on + strand at 816.437 kb on - strand at 816.501 kb on + strand, within EX28DRAFT_0813 at 816.502 kb on - strand, within EX28DRAFT_0813 at 816.647 kb on + strand, within EX28DRAFT_0813 at 816.832 kb on - strand at 816.868 kb on + strand at 816.868 kb on + strand at 817.151 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 815,447 - EX28DRAFT_0812 0.16 -1.3 815,620 - EX28DRAFT_0812 0.32 -0.8 815,641 - EX28DRAFT_0812 0.34 -1.8 815,644 - EX28DRAFT_0812 0.34 +0.4 815,644 - EX28DRAFT_0812 0.34 +0.9 815,655 + EX28DRAFT_0812 0.35 -0.1 815,656 - EX28DRAFT_0812 0.35 +0.3 815,818 + EX28DRAFT_0812 0.50 +0.2 815,818 + EX28DRAFT_0812 0.50 +0.3 815,819 - EX28DRAFT_0812 0.50 -1.2 815,819 - EX28DRAFT_0812 0.50 -0.8 815,819 - EX28DRAFT_0812 0.50 +0.2 815,824 + EX28DRAFT_0812 0.51 +0.1 815,824 + EX28DRAFT_0812 0.51 +0.7 815,824 + EX28DRAFT_0812 0.51 -0.9 815,824 + EX28DRAFT_0812 0.51 -0.6 815,825 - EX28DRAFT_0812 0.51 +0.6 815,826 + EX28DRAFT_0812 0.51 -0.7 815,849 + EX28DRAFT_0812 0.53 -0.1 815,886 + EX28DRAFT_0812 0.56 -1.1 815,886 + EX28DRAFT_0812 0.56 -0.6 815,911 - EX28DRAFT_0812 0.59 +0.3 815,964 - EX28DRAFT_0812 0.64 +0.6 815,964 - EX28DRAFT_0812 0.64 +0.3 815,990 + EX28DRAFT_0812 0.66 +0.5 815,994 + EX28DRAFT_0812 0.66 -0.0 816,037 - EX28DRAFT_0812 0.70 +0.3 816,037 - EX28DRAFT_0812 0.70 -0.1 816,037 - EX28DRAFT_0812 0.70 +0.3 816,042 - EX28DRAFT_0812 0.71 +0.9 816,042 - EX28DRAFT_0812 0.71 +0.5 816,187 - EX28DRAFT_0812 0.84 -0.2 816,187 - EX28DRAFT_0812 0.84 -0.8 816,247 + +0.3 816,271 - +0.0 816,281 - -0.1 816,323 + -0.5 816,352 + +1.0 816,356 - -0.6 816,407 + +0.2 816,410 + -0.8 816,429 + +0.0 816,437 - +1.2 816,501 + EX28DRAFT_0813 0.16 -0.9 816,502 - EX28DRAFT_0813 0.16 -0.7 816,647 + EX28DRAFT_0813 0.49 -0.4 816,832 - -1.5 816,868 + +0.6 816,868 + +0.5 817,151 + +0.6
Or see this region's nucleotide sequence