Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0662 and EX28DRAFT_0663 are separated by 19 nucleotides EX28DRAFT_0663 and EX28DRAFT_0664 are separated by 104 nucleotides
EX28DRAFT_0662: EX28DRAFT_0662 - Chemotaxis protein histidine kinase and related kinases, at 656,025 to 658,061
_0662
EX28DRAFT_0663: EX28DRAFT_0663 - Chemotaxis signal transduction protein, at 658,081 to 658,584
_0663
EX28DRAFT_0664: EX28DRAFT_0664 - Na+/H+-dicarboxylate symporters, at 658,689 to 659,954
_0664
Position (kb) 658
659 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 657.087 kb on + strand, within EX28DRAFT_0662 at 657.087 kb on + strand, within EX28DRAFT_0662 at 657.140 kb on + strand, within EX28DRAFT_0662 at 657.536 kb on + strand, within EX28DRAFT_0662 at 657.537 kb on - strand, within EX28DRAFT_0662 at 657.537 kb on - strand, within EX28DRAFT_0662 at 657.575 kb on + strand, within EX28DRAFT_0662 at 657.576 kb on - strand, within EX28DRAFT_0662 at 657.913 kb on + strand at 657.914 kb on - strand at 657.914 kb on - strand at 658.048 kb on - strand at 658.048 kb on - strand at 658.063 kb on + strand at 658.064 kb on - strand at 658.075 kb on - strand at 658.077 kb on + strand at 658.243 kb on - strand, within EX28DRAFT_0663 at 658.324 kb on + strand, within EX28DRAFT_0663 at 658.325 kb on - strand, within EX28DRAFT_0663 at 658.577 kb on + strand at 658.578 kb on - strand at 658.587 kb on - strand at 658.691 kb on - strand at 658.705 kb on - strand at 658.769 kb on + strand at 658.769 kb on + strand at 658.769 kb on + strand at 658.788 kb on - strand at 658.859 kb on + strand, within EX28DRAFT_0664 at 658.984 kb on + strand, within EX28DRAFT_0664 at 658.984 kb on + strand, within EX28DRAFT_0664 at 659.021 kb on - strand, within EX28DRAFT_0664 at 659.021 kb on - strand, within EX28DRAFT_0664 at 659.219 kb on - strand, within EX28DRAFT_0664 at 659.219 kb on - strand, within EX28DRAFT_0664 at 659.263 kb on + strand, within EX28DRAFT_0664 at 659.264 kb on - strand, within EX28DRAFT_0664 at 659.264 kb on - strand, within EX28DRAFT_0664 at 659.264 kb on - strand, within EX28DRAFT_0664 at 659.264 kb on - strand, within EX28DRAFT_0664 at 659.264 kb on - strand, within EX28DRAFT_0664 at 659.287 kb on + strand, within EX28DRAFT_0664 at 659.288 kb on - strand, within EX28DRAFT_0664 at 659.362 kb on + strand, within EX28DRAFT_0664 at 659.362 kb on + strand, within EX28DRAFT_0664 at 659.363 kb on - strand, within EX28DRAFT_0664 at 659.363 kb on - strand, within EX28DRAFT_0664 at 659.363 kb on - strand, within EX28DRAFT_0664 at 659.372 kb on - strand, within EX28DRAFT_0664 at 659.394 kb on - strand, within EX28DRAFT_0664
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 657,087 + EX28DRAFT_0662 0.52 +0.7 657,087 + EX28DRAFT_0662 0.52 -0.0 657,140 + EX28DRAFT_0662 0.55 +0.8 657,536 + EX28DRAFT_0662 0.74 +1.5 657,537 - EX28DRAFT_0662 0.74 -0.4 657,537 - EX28DRAFT_0662 0.74 -2.6 657,575 + EX28DRAFT_0662 0.76 -1.1 657,576 - EX28DRAFT_0662 0.76 -3.8 657,913 + -0.8 657,914 - -2.0 657,914 - -0.3 658,048 - -0.6 658,048 - -1.8 658,063 + +1.2 658,064 - -0.9 658,075 - -0.3 658,077 + +0.2 658,243 - EX28DRAFT_0663 0.32 -0.1 658,324 + EX28DRAFT_0663 0.48 -0.8 658,325 - EX28DRAFT_0663 0.48 -0.7 658,577 + -0.3 658,578 - +0.0 658,587 - +0.5 658,691 - +0.3 658,705 - -0.7 658,769 + +0.3 658,769 + -0.6 658,769 + +0.4 658,788 - +0.2 658,859 + EX28DRAFT_0664 0.13 -2.2 658,984 + EX28DRAFT_0664 0.23 -0.2 658,984 + EX28DRAFT_0664 0.23 -0.1 659,021 - EX28DRAFT_0664 0.26 +0.3 659,021 - EX28DRAFT_0664 0.26 +0.3 659,219 - EX28DRAFT_0664 0.42 +0.1 659,219 - EX28DRAFT_0664 0.42 -0.1 659,263 + EX28DRAFT_0664 0.45 -0.6 659,264 - EX28DRAFT_0664 0.45 +1.4 659,264 - EX28DRAFT_0664 0.45 -0.1 659,264 - EX28DRAFT_0664 0.45 -0.4 659,264 - EX28DRAFT_0664 0.45 +0.4 659,264 - EX28DRAFT_0664 0.45 -0.3 659,287 + EX28DRAFT_0664 0.47 -0.0 659,288 - EX28DRAFT_0664 0.47 -0.4 659,362 + EX28DRAFT_0664 0.53 -1.5 659,362 + EX28DRAFT_0664 0.53 -0.7 659,363 - EX28DRAFT_0664 0.53 +0.2 659,363 - EX28DRAFT_0664 0.53 -0.6 659,363 - EX28DRAFT_0664 0.53 -0.3 659,372 - EX28DRAFT_0664 0.54 +0.2 659,394 - EX28DRAFT_0664 0.56 -0.9
Or see this region's nucleotide sequence