Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0123 and EX28DRAFT_0124 are separated by 1 nucleotides EX28DRAFT_0124 and EX28DRAFT_0125 are separated by 156 nucleotides EX28DRAFT_0125 and EX28DRAFT_0126 are separated by 169 nucleotides
EX28DRAFT_0123: EX28DRAFT_0123 - Large extracellular alpha-helical protein, at 61,574 to 66,526
_0123
EX28DRAFT_0124: EX28DRAFT_0124 - penicillin-binding protein 1C, at 66,528 to 68,852
_0124
EX28DRAFT_0125: EX28DRAFT_0125 - nucleoside diphosphate kinase (EC 2.7.4.6), at 69,009 to 69,440
_0125
EX28DRAFT_0126: EX28DRAFT_0126 - 23S rRNA (adenine(2503)-C(2))-methyltransferase, at 69,610 to 70,776
_0126
Position (kb) 66
67
68
69 Strain fitness (log2 ratio) -2
-1
0
1
2 at 65.760 kb on - strand, within EX28DRAFT_0123 at 65.760 kb on - strand, within EX28DRAFT_0123 at 65.760 kb on - strand, within EX28DRAFT_0123 at 65.785 kb on + strand, within EX28DRAFT_0123 at 65.785 kb on + strand, within EX28DRAFT_0123 at 65.785 kb on + strand, within EX28DRAFT_0123 at 65.941 kb on + strand, within EX28DRAFT_0123 at 66.118 kb on + strand at 66.119 kb on - strand at 66.119 kb on - strand at 66.404 kb on + strand at 66.434 kb on + strand at 66.463 kb on + strand at 66.463 kb on + strand at 66.463 kb on + strand at 66.463 kb on + strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.464 kb on - strand at 66.467 kb on + strand at 66.468 kb on - strand at 66.809 kb on - strand, within EX28DRAFT_0124 at 67.006 kb on - strand, within EX28DRAFT_0124 at 67.066 kb on - strand, within EX28DRAFT_0124 at 67.090 kb on + strand, within EX28DRAFT_0124 at 67.090 kb on + strand, within EX28DRAFT_0124 at 67.090 kb on + strand, within EX28DRAFT_0124 at 67.090 kb on + strand, within EX28DRAFT_0124 at 67.091 kb on - strand, within EX28DRAFT_0124 at 67.091 kb on - strand, within EX28DRAFT_0124 at 67.091 kb on - strand, within EX28DRAFT_0124 at 67.096 kb on - strand, within EX28DRAFT_0124 at 67.144 kb on + strand, within EX28DRAFT_0124 at 67.240 kb on + strand, within EX28DRAFT_0124 at 67.458 kb on - strand, within EX28DRAFT_0124 at 67.491 kb on - strand, within EX28DRAFT_0124 at 67.493 kb on + strand, within EX28DRAFT_0124 at 67.568 kb on + strand, within EX28DRAFT_0124 at 67.577 kb on + strand, within EX28DRAFT_0124 at 67.647 kb on + strand, within EX28DRAFT_0124 at 68.198 kb on - strand, within EX28DRAFT_0124 at 68.198 kb on - strand, within EX28DRAFT_0124 at 68.949 kb on - strand at 68.950 kb on + strand at 68.975 kb on + strand at 69.327 kb on + strand, within EX28DRAFT_0125 at 69.439 kb on - strand at 69.457 kb on - strand at 69.464 kb on - strand at 69.472 kb on - strand at 69.513 kb on + strand at 69.514 kb on - strand at 69.587 kb on + strand at 69.609 kb on + strand at 69.610 kb on - strand at 69.620 kb on + strand at 69.620 kb on + strand at 69.628 kb on - strand at 69.718 kb on - strand at 69.770 kb on - strand, within EX28DRAFT_0126 at 69.775 kb on + strand, within EX28DRAFT_0126
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 65,760 - EX28DRAFT_0123 0.85 +0.2 65,760 - EX28DRAFT_0123 0.85 -0.0 65,760 - EX28DRAFT_0123 0.85 +1.5 65,785 + EX28DRAFT_0123 0.85 +0.4 65,785 + EX28DRAFT_0123 0.85 -0.0 65,785 + EX28DRAFT_0123 0.85 -0.2 65,941 + EX28DRAFT_0123 0.88 -0.2 66,118 + -0.0 66,119 - -0.4 66,119 - +0.3 66,404 + +0.1 66,434 + +0.3 66,463 + -1.0 66,463 + +1.9 66,463 + +1.4 66,463 + +1.0 66,464 - -0.3 66,464 - +0.7 66,464 - -0.1 66,464 - -0.2 66,464 - +0.0 66,464 - +1.2 66,464 - +0.9 66,464 - +0.2 66,464 - -1.0 66,467 + +2.0 66,468 - -0.2 66,809 - EX28DRAFT_0124 0.12 -1.1 67,006 - EX28DRAFT_0124 0.21 +0.2 67,066 - EX28DRAFT_0124 0.23 -1.3 67,090 + EX28DRAFT_0124 0.24 +0.1 67,090 + EX28DRAFT_0124 0.24 -0.2 67,090 + EX28DRAFT_0124 0.24 +0.1 67,090 + EX28DRAFT_0124 0.24 +0.7 67,091 - EX28DRAFT_0124 0.24 +0.5 67,091 - EX28DRAFT_0124 0.24 -0.0 67,091 - EX28DRAFT_0124 0.24 -1.6 67,096 - EX28DRAFT_0124 0.24 -0.5 67,144 + EX28DRAFT_0124 0.26 -0.9 67,240 + EX28DRAFT_0124 0.31 +1.1 67,458 - EX28DRAFT_0124 0.40 +0.6 67,491 - EX28DRAFT_0124 0.41 +0.2 67,493 + EX28DRAFT_0124 0.42 -0.1 67,568 + EX28DRAFT_0124 0.45 -0.1 67,577 + EX28DRAFT_0124 0.45 +0.7 67,647 + EX28DRAFT_0124 0.48 +0.3 68,198 - EX28DRAFT_0124 0.72 -0.1 68,198 - EX28DRAFT_0124 0.72 +0.1 68,949 - +2.1 68,950 + -0.1 68,975 + +0.4 69,327 + EX28DRAFT_0125 0.74 -2.6 69,439 - -1.0 69,457 - -0.7 69,464 - -0.0 69,472 - +1.3 69,513 + +1.2 69,514 - +0.6 69,587 + +0.5 69,609 + +0.2 69,610 - +0.6 69,620 + +0.3 69,620 + +0.7 69,628 - +1.9 69,718 - +1.0 69,770 - EX28DRAFT_0126 0.14 -0.3 69,775 + EX28DRAFT_0126 0.14 -0.6
Or see this region's nucleotide sequence