Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0038 and EX28DRAFT_0039 are separated by 22 nucleotides EX28DRAFT_0039 and EX28DRAFT_0040 are separated by 76 nucleotides
EX28DRAFT_0038: EX28DRAFT_0038 - K+ transport systems, NAD-binding component, at 17,653 to 19,029
_0038
EX28DRAFT_0039: EX28DRAFT_0039 - 16S rRNA (cytosine(967)-C(5))-methyltransferase, at 19,052 to 20,314
_0039
EX28DRAFT_0040: EX28DRAFT_0040 - methionyl-tRNA formyltransferase, at 20,391 to 21,338
_0040
Position (kb) 19
20
21 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 18.097 kb on - strand, within EX28DRAFT_0038 at 18.333 kb on + strand, within EX28DRAFT_0038 at 18.630 kb on - strand, within EX28DRAFT_0038 at 19.227 kb on + strand, within EX28DRAFT_0039 at 19.228 kb on - strand, within EX28DRAFT_0039 at 19.303 kb on + strand, within EX28DRAFT_0039 at 19.306 kb on + strand, within EX28DRAFT_0039 at 19.307 kb on - strand, within EX28DRAFT_0039 at 19.553 kb on - strand, within EX28DRAFT_0039 at 19.653 kb on - strand, within EX28DRAFT_0039 at 19.691 kb on + strand, within EX28DRAFT_0039 at 19.715 kb on + strand, within EX28DRAFT_0039 at 20.086 kb on - strand, within EX28DRAFT_0039 at 20.099 kb on - strand, within EX28DRAFT_0039 at 20.107 kb on - strand, within EX28DRAFT_0039 at 20.112 kb on - strand, within EX28DRAFT_0039 at 20.268 kb on - strand at 20.321 kb on + strand at 20.322 kb on - strand at 20.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 18,097 - EX28DRAFT_0038 0.32 +1.1 18,333 + EX28DRAFT_0038 0.49 -0.2 18,630 - EX28DRAFT_0038 0.71 -0.1 19,227 + EX28DRAFT_0039 0.14 -1.9 19,228 - EX28DRAFT_0039 0.14 -0.5 19,303 + EX28DRAFT_0039 0.20 -1.6 19,306 + EX28DRAFT_0039 0.20 -4.3 19,307 - EX28DRAFT_0039 0.20 -0.0 19,553 - EX28DRAFT_0039 0.40 -0.5 19,653 - EX28DRAFT_0039 0.48 +0.4 19,691 + EX28DRAFT_0039 0.51 -0.2 19,715 + EX28DRAFT_0039 0.52 +0.8 20,086 - EX28DRAFT_0039 0.82 +0.0 20,099 - EX28DRAFT_0039 0.83 -0.1 20,107 - EX28DRAFT_0039 0.84 -0.2 20,112 - EX28DRAFT_0039 0.84 -0.8 20,268 - -0.8 20,321 + -0.7 20,322 - -1.0 20,383 - -0.1
Or see this region's nucleotide sequence