Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21190 and CA264_21195 are separated by 135 nucleotides CA264_21195 and CA264_21200 are separated by 332 nucleotides CA264_21200 and CA264_21205 are separated by 17 nucleotides CA264_21205 and CA264_21210 are separated by 79 nucleotides
CA264_21190: CA264_21190 - hypothetical protein, at 104,007 to 105,101
_21190
CA264_21195: CA264_21195 - hypothetical protein, at 105,237 to 105,677
_21195
CA264_21200: CA264_21200 - hypothetical protein, at 106,010 to 106,597
_21200
CA264_21205: CA264_21205 - hypothetical protein, at 106,615 to 106,977
_21205
CA264_21210: CA264_21210 - SOS mutagenesis and repair protein UmuC, at 107,057 to 108,325
_21210
Position (kb)
106
107 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 105.048 kb on - strand at 105.048 kb on - strand at 105.049 kb on + strand at 105.049 kb on + strand at 105.049 kb on + strand at 105.049 kb on + strand at 105.049 kb on + strand at 105.050 kb on - strand at 105.050 kb on - strand at 105.098 kb on - strand at 105.098 kb on - strand at 105.111 kb on + strand at 105.111 kb on + strand at 105.112 kb on - strand at 105.114 kb on + strand at 105.114 kb on + strand at 105.115 kb on - strand at 105.115 kb on - strand at 105.116 kb on + strand at 105.116 kb on + strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.133 kb on - strand at 105.181 kb on + strand at 105.182 kb on - strand at 105.182 kb on - strand at 105.182 kb on - strand at 105.182 kb on - strand at 105.215 kb on + strand at 105.216 kb on - strand at 105.237 kb on - strand at 105.248 kb on - strand at 105.272 kb on + strand at 105.272 kb on + strand at 105.272 kb on + strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.273 kb on - strand at 105.329 kb on + strand, within CA264_21195 at 105.330 kb on - strand, within CA264_21195 at 105.339 kb on + strand, within CA264_21195 at 105.389 kb on + strand, within CA264_21195 at 105.390 kb on - strand, within CA264_21195 at 105.390 kb on - strand, within CA264_21195 at 105.451 kb on + strand, within CA264_21195 at 105.502 kb on + strand, within CA264_21195 at 105.503 kb on - strand, within CA264_21195 at 105.585 kb on + strand, within CA264_21195 at 105.621 kb on - strand, within CA264_21195 at 105.624 kb on + strand, within CA264_21195 at 105.654 kb on + strand at 105.663 kb on + strand at 105.671 kb on + strand at 105.672 kb on - strand at 105.672 kb on - strand at 105.675 kb on + strand at 105.675 kb on + strand at 105.678 kb on + strand at 105.679 kb on - strand at 105.679 kb on - strand at 105.692 kb on - strand at 105.692 kb on - strand at 105.692 kb on - strand at 105.756 kb on - strand at 105.769 kb on - strand at 105.793 kb on + strand at 105.794 kb on - strand at 105.794 kb on - strand at 105.809 kb on - strand at 105.812 kb on + strand at 105.813 kb on - strand at 105.815 kb on - strand at 105.815 kb on - strand at 105.815 kb on - strand at 105.815 kb on - strand at 105.817 kb on - strand at 105.842 kb on - strand at 105.922 kb on + strand at 105.944 kb on + strand at 105.950 kb on - strand at 105.955 kb on + strand at 105.955 kb on + strand at 105.956 kb on - strand at 105.957 kb on + strand at 105.957 kb on + strand at 105.957 kb on + strand at 105.957 kb on + strand at 105.957 kb on + strand at 105.958 kb on - strand at 105.958 kb on - strand at 105.958 kb on - strand at 105.958 kb on - strand at 105.958 kb on - strand at 105.959 kb on + strand at 105.959 kb on + strand at 105.960 kb on - strand at 105.962 kb on + strand at 105.962 kb on + strand at 105.976 kb on + strand at 105.977 kb on - strand at 106.009 kb on + strand at 106.097 kb on + strand, within CA264_21200 at 106.097 kb on + strand, within CA264_21200 at 106.098 kb on - strand, within CA264_21200 at 106.129 kb on + strand, within CA264_21200 at 106.136 kb on + strand, within CA264_21200 at 106.157 kb on + strand, within CA264_21200 at 106.175 kb on + strand, within CA264_21200 at 106.176 kb on - strand, within CA264_21200 at 106.316 kb on + strand, within CA264_21200 at 106.316 kb on + strand, within CA264_21200 at 106.317 kb on - strand, within CA264_21200 at 106.364 kb on + strand, within CA264_21200 at 106.365 kb on - strand, within CA264_21200 at 106.365 kb on - strand, within CA264_21200 at 106.381 kb on - strand, within CA264_21200 at 106.483 kb on + strand, within CA264_21200 at 106.484 kb on - strand, within CA264_21200 at 106.484 kb on - strand, within CA264_21200 at 106.484 kb on - strand, within CA264_21200 at 106.502 kb on + strand, within CA264_21200 at 106.503 kb on - strand, within CA264_21200 at 106.503 kb on - strand, within CA264_21200 at 106.504 kb on + strand, within CA264_21200 at 106.515 kb on - strand, within CA264_21200 at 106.515 kb on - strand, within CA264_21200 at 106.604 kb on + strand at 106.605 kb on - strand at 106.607 kb on - strand at 106.607 kb on - strand at 106.607 kb on - strand at 106.607 kb on - strand at 106.609 kb on + strand at 106.610 kb on - strand at 106.610 kb on - strand at 106.611 kb on + strand at 106.611 kb on + strand at 106.611 kb on + strand at 106.611 kb on + strand at 106.612 kb on - strand at 106.612 kb on - strand at 106.613 kb on + strand at 106.613 kb on + strand at 106.614 kb on - strand at 106.614 kb on - strand at 106.628 kb on - strand at 106.630 kb on + strand at 106.631 kb on - strand at 106.647 kb on - strand at 106.671 kb on + strand, within CA264_21205 at 106.671 kb on + strand, within CA264_21205 at 106.672 kb on - strand, within CA264_21205 at 106.672 kb on - strand, within CA264_21205 at 106.672 kb on - strand, within CA264_21205 at 106.672 kb on - strand, within CA264_21205 at 106.674 kb on + strand, within CA264_21205 at 106.674 kb on + strand, within CA264_21205 at 106.675 kb on - strand, within CA264_21205 at 106.676 kb on + strand, within CA264_21205 at 106.808 kb on + strand, within CA264_21205 at 106.808 kb on + strand, within CA264_21205 at 106.829 kb on + strand, within CA264_21205 at 106.892 kb on + strand, within CA264_21205 at 106.978 kb on - strand at 106.979 kb on + strand at 107.082 kb on - strand at 107.092 kb on + strand at 107.093 kb on - strand at 107.094 kb on + strand at 107.095 kb on - strand at 107.095 kb on - strand at 107.131 kb on + strand at 107.153 kb on + strand at 107.160 kb on - strand at 107.185 kb on + strand, within CA264_21210 at 107.185 kb on + strand, within CA264_21210 at 107.221 kb on + strand, within CA264_21210 at 107.246 kb on - strand, within CA264_21210 at 107.246 kb on - strand, within CA264_21210 at 107.286 kb on + strand, within CA264_21210 at 107.323 kb on - strand, within CA264_21210 at 107.323 kb on - strand, within CA264_21210 at 107.349 kb on + strand, within CA264_21210 at 107.409 kb on + strand, within CA264_21210 at 107.409 kb on + strand, within CA264_21210 at 107.409 kb on + strand, within CA264_21210 at 107.410 kb on - strand, within CA264_21210 at 107.412 kb on + strand, within CA264_21210 at 107.412 kb on + strand, within CA264_21210 at 107.440 kb on + strand, within CA264_21210 at 107.441 kb on - strand, within CA264_21210 at 107.444 kb on - strand, within CA264_21210 at 107.444 kb on - strand, within CA264_21210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 105,048 - -0.3 105,048 - +0.0 105,049 + -1.2 105,049 + -0.4 105,049 + -0.1 105,049 + -0.0 105,049 + -0.4 105,050 - -0.3 105,050 - -0.3 105,098 - -0.2 105,098 - -0.1 105,111 + +0.2 105,111 + -1.0 105,112 - -0.1 105,114 + +0.6 105,114 + +1.0 105,115 - +0.7 105,115 - +0.5 105,116 + +1.1 105,116 + -0.8 105,117 - -0.2 105,117 - -2.1 105,117 - -0.4 105,133 - +0.4 105,181 + -0.7 105,182 - -0.2 105,182 - +0.4 105,182 - +1.2 105,182 - -0.3 105,215 + -0.0 105,216 - -0.4 105,237 - +0.4 105,248 - -0.0 105,272 + -0.3 105,272 + +1.4 105,272 + -0.6 105,273 - -0.3 105,273 - -0.4 105,273 - +0.3 105,273 - +0.2 105,273 - -0.3 105,273 - +0.7 105,273 - -0.3 105,329 + CA264_21195 0.21 -0.2 105,330 - CA264_21195 0.21 +0.1 105,339 + CA264_21195 0.23 -0.6 105,389 + CA264_21195 0.34 +0.6 105,390 - CA264_21195 0.35 +0.5 105,390 - CA264_21195 0.35 -0.4 105,451 + CA264_21195 0.49 +0.7 105,502 + CA264_21195 0.60 -0.8 105,503 - CA264_21195 0.60 -0.0 105,585 + CA264_21195 0.79 -0.1 105,621 - CA264_21195 0.87 -0.1 105,624 + CA264_21195 0.88 -1.3 105,654 + +0.0 105,663 + +0.2 105,671 + -0.4 105,672 - +0.1 105,672 - -0.7 105,675 + -0.3 105,675 + -1.5 105,678 + +0.6 105,679 - +0.0 105,679 - +1.3 105,692 - -0.6 105,692 - +0.9 105,692 - +0.9 105,756 - -0.2 105,769 - -0.1 105,793 + -0.3 105,794 - -0.4 105,794 - -1.0 105,809 - +0.2 105,812 + +0.4 105,813 - +0.5 105,815 - +1.1 105,815 - +0.2 105,815 - +0.2 105,815 - -0.4 105,817 - -0.1 105,842 - +1.1 105,922 + -0.7 105,944 + +0.1 105,950 - -0.3 105,955 + +0.2 105,955 + -0.8 105,956 - +0.1 105,957 + -0.6 105,957 + +0.5 105,957 + -0.4 105,957 + -0.1 105,957 + -0.0 105,958 - +0.0 105,958 - -0.3 105,958 - -0.5 105,958 - +0.1 105,958 - -0.2 105,959 + +1.0 105,959 + +1.3 105,960 - +0.6 105,962 + -0.3 105,962 + +0.6 105,976 + -1.7 105,977 - +1.2 106,009 + -0.3 106,097 + CA264_21200 0.15 +0.1 106,097 + CA264_21200 0.15 +0.8 106,098 - CA264_21200 0.15 +1.3 106,129 + CA264_21200 0.20 +0.7 106,136 + CA264_21200 0.21 +0.1 106,157 + CA264_21200 0.25 +0.1 106,175 + CA264_21200 0.28 -0.0 106,176 - CA264_21200 0.28 +0.4 106,316 + CA264_21200 0.52 -0.0 106,316 + CA264_21200 0.52 -0.0 106,317 - CA264_21200 0.52 +0.5 106,364 + CA264_21200 0.60 -0.5 106,365 - CA264_21200 0.60 +0.3 106,365 - CA264_21200 0.60 +0.3 106,381 - CA264_21200 0.63 +0.2 106,483 + CA264_21200 0.80 +0.7 106,484 - CA264_21200 0.81 +0.4 106,484 - CA264_21200 0.81 +0.4 106,484 - CA264_21200 0.81 +2.0 106,502 + CA264_21200 0.84 +0.7 106,503 - CA264_21200 0.84 +0.2 106,503 - CA264_21200 0.84 -0.1 106,504 + CA264_21200 0.84 -0.6 106,515 - CA264_21200 0.86 +2.5 106,515 - CA264_21200 0.86 +0.0 106,604 + -0.3 106,605 - +0.8 106,607 - -0.2 106,607 - +0.2 106,607 - -0.7 106,607 - +0.2 106,609 + +1.4 106,610 - -0.1 106,610 - -0.6 106,611 + +0.2 106,611 + +0.0 106,611 + -0.3 106,611 + -0.3 106,612 - -0.2 106,612 - -0.2 106,613 + +0.4 106,613 + +0.0 106,614 - +0.0 106,614 - +0.9 106,628 - +0.4 106,630 + +0.1 106,631 - -0.4 106,647 - -0.5 106,671 + CA264_21205 0.15 -0.1 106,671 + CA264_21205 0.15 -0.4 106,672 - CA264_21205 0.16 +0.9 106,672 - CA264_21205 0.16 +0.3 106,672 - CA264_21205 0.16 -0.5 106,672 - CA264_21205 0.16 -0.4 106,674 + CA264_21205 0.16 +0.7 106,674 + CA264_21205 0.16 +0.3 106,675 - CA264_21205 0.17 -0.2 106,676 + CA264_21205 0.17 +0.5 106,808 + CA264_21205 0.53 +0.2 106,808 + CA264_21205 0.53 +0.0 106,829 + CA264_21205 0.59 -0.3 106,892 + CA264_21205 0.76 +1.1 106,978 - -0.3 106,979 + -1.1 107,082 - +0.3 107,092 + -0.1 107,093 - +0.4 107,094 + +0.1 107,095 - -0.9 107,095 - -0.6 107,131 + +0.0 107,153 + -0.7 107,160 - +0.6 107,185 + CA264_21210 0.10 -0.4 107,185 + CA264_21210 0.10 -0.5 107,221 + CA264_21210 0.13 -0.1 107,246 - CA264_21210 0.15 +0.1 107,246 - CA264_21210 0.15 +1.1 107,286 + CA264_21210 0.18 +0.3 107,323 - CA264_21210 0.21 -0.1 107,323 - CA264_21210 0.21 -1.0 107,349 + CA264_21210 0.23 +1.2 107,409 + CA264_21210 0.28 -0.7 107,409 + CA264_21210 0.28 +0.1 107,409 + CA264_21210 0.28 -1.0 107,410 - CA264_21210 0.28 -0.5 107,412 + CA264_21210 0.28 -0.1 107,412 + CA264_21210 0.28 -0.8 107,440 + CA264_21210 0.30 -0.3 107,441 - CA264_21210 0.30 +0.3 107,444 - CA264_21210 0.30 +0.1 107,444 - CA264_21210 0.30 +0.5
Or see this region's nucleotide sequence