Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21200

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21190 and CA264_21195 are separated by 135 nucleotidesCA264_21195 and CA264_21200 are separated by 332 nucleotidesCA264_21200 and CA264_21205 are separated by 17 nucleotidesCA264_21205 and CA264_21210 are separated by 79 nucleotides CA264_21190: CA264_21190 - hypothetical protein, at 104,007 to 105,101 _21190 CA264_21195: CA264_21195 - hypothetical protein, at 105,237 to 105,677 _21195 CA264_21200: CA264_21200 - hypothetical protein, at 106,010 to 106,597 _21200 CA264_21205: CA264_21205 - hypothetical protein, at 106,615 to 106,977 _21205 CA264_21210: CA264_21210 - SOS mutagenesis and repair protein UmuC, at 107,057 to 108,325 _21210 Position (kb) 106 107Strain fitness (log2 ratio) -2 -1 0 1 2at 105.048 kb on - strandat 105.048 kb on - strandat 105.049 kb on + strandat 105.049 kb on + strandat 105.049 kb on + strandat 105.049 kb on + strandat 105.049 kb on + strandat 105.050 kb on - strandat 105.050 kb on - strandat 105.098 kb on - strandat 105.098 kb on - strandat 105.111 kb on + strandat 105.111 kb on + strandat 105.112 kb on - strandat 105.114 kb on + strandat 105.114 kb on + strandat 105.115 kb on - strandat 105.115 kb on - strandat 105.116 kb on + strandat 105.116 kb on + strandat 105.117 kb on - strandat 105.117 kb on - strandat 105.117 kb on - strandat 105.133 kb on - strandat 105.181 kb on + strandat 105.182 kb on - strandat 105.182 kb on - strandat 105.182 kb on - strandat 105.182 kb on - strandat 105.215 kb on + strandat 105.216 kb on - strandat 105.237 kb on - strandat 105.248 kb on - strandat 105.272 kb on + strandat 105.272 kb on + strandat 105.272 kb on + strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.273 kb on - strandat 105.329 kb on + strand, within CA264_21195at 105.330 kb on - strand, within CA264_21195at 105.339 kb on + strand, within CA264_21195at 105.389 kb on + strand, within CA264_21195at 105.390 kb on - strand, within CA264_21195at 105.390 kb on - strand, within CA264_21195at 105.451 kb on + strand, within CA264_21195at 105.502 kb on + strand, within CA264_21195at 105.503 kb on - strand, within CA264_21195at 105.585 kb on + strand, within CA264_21195at 105.621 kb on - strand, within CA264_21195at 105.624 kb on + strand, within CA264_21195at 105.654 kb on + strandat 105.663 kb on + strandat 105.671 kb on + strandat 105.672 kb on - strandat 105.672 kb on - strandat 105.675 kb on + strandat 105.675 kb on + strandat 105.678 kb on + strandat 105.679 kb on - strandat 105.679 kb on - strandat 105.692 kb on - strandat 105.692 kb on - strandat 105.692 kb on - strandat 105.756 kb on - strandat 105.769 kb on - strandat 105.793 kb on + strandat 105.794 kb on - strandat 105.794 kb on - strandat 105.809 kb on - strandat 105.812 kb on + strandat 105.813 kb on - strandat 105.815 kb on - strandat 105.815 kb on - strandat 105.815 kb on - strandat 105.815 kb on - strandat 105.817 kb on - strandat 105.842 kb on - strandat 105.922 kb on + strandat 105.944 kb on + strandat 105.950 kb on - strandat 105.955 kb on + strandat 105.955 kb on + strandat 105.956 kb on - strandat 105.957 kb on + strandat 105.957 kb on + strandat 105.957 kb on + strandat 105.957 kb on + strandat 105.957 kb on + strandat 105.958 kb on - strandat 105.958 kb on - strandat 105.958 kb on - strandat 105.958 kb on - strandat 105.958 kb on - strandat 105.959 kb on + strandat 105.959 kb on + strandat 105.960 kb on - strandat 105.962 kb on + strandat 105.962 kb on + strandat 105.976 kb on + strandat 105.977 kb on - strandat 106.009 kb on + strandat 106.097 kb on + strand, within CA264_21200at 106.097 kb on + strand, within CA264_21200at 106.098 kb on - strand, within CA264_21200at 106.129 kb on + strand, within CA264_21200at 106.136 kb on + strand, within CA264_21200at 106.157 kb on + strand, within CA264_21200at 106.175 kb on + strand, within CA264_21200at 106.176 kb on - strand, within CA264_21200at 106.316 kb on + strand, within CA264_21200at 106.316 kb on + strand, within CA264_21200at 106.317 kb on - strand, within CA264_21200at 106.364 kb on + strand, within CA264_21200at 106.365 kb on - strand, within CA264_21200at 106.365 kb on - strand, within CA264_21200at 106.381 kb on - strand, within CA264_21200at 106.483 kb on + strand, within CA264_21200at 106.484 kb on - strand, within CA264_21200at 106.484 kb on - strand, within CA264_21200at 106.484 kb on - strand, within CA264_21200at 106.502 kb on + strand, within CA264_21200at 106.503 kb on - strand, within CA264_21200at 106.503 kb on - strand, within CA264_21200at 106.504 kb on + strand, within CA264_21200at 106.515 kb on - strand, within CA264_21200at 106.515 kb on - strand, within CA264_21200at 106.604 kb on + strandat 106.605 kb on - strandat 106.607 kb on - strandat 106.607 kb on - strandat 106.607 kb on - strandat 106.607 kb on - strandat 106.609 kb on + strandat 106.610 kb on - strandat 106.610 kb on - strandat 106.611 kb on + strandat 106.611 kb on + strandat 106.611 kb on + strandat 106.611 kb on + strandat 106.612 kb on - strandat 106.612 kb on - strandat 106.613 kb on + strandat 106.613 kb on + strandat 106.614 kb on - strandat 106.614 kb on - strandat 106.628 kb on - strandat 106.630 kb on + strandat 106.631 kb on - strandat 106.647 kb on - strandat 106.671 kb on + strand, within CA264_21205at 106.671 kb on + strand, within CA264_21205at 106.672 kb on - strand, within CA264_21205at 106.672 kb on - strand, within CA264_21205at 106.672 kb on - strand, within CA264_21205at 106.672 kb on - strand, within CA264_21205at 106.674 kb on + strand, within CA264_21205at 106.674 kb on + strand, within CA264_21205at 106.675 kb on - strand, within CA264_21205at 106.676 kb on + strand, within CA264_21205at 106.808 kb on + strand, within CA264_21205at 106.808 kb on + strand, within CA264_21205at 106.829 kb on + strand, within CA264_21205at 106.892 kb on + strand, within CA264_21205at 106.978 kb on - strandat 106.979 kb on + strandat 107.082 kb on - strandat 107.092 kb on + strandat 107.093 kb on - strandat 107.094 kb on + strandat 107.095 kb on - strandat 107.095 kb on - strandat 107.131 kb on + strandat 107.153 kb on + strandat 107.160 kb on - strandat 107.185 kb on + strand, within CA264_21210at 107.185 kb on + strand, within CA264_21210at 107.221 kb on + strand, within CA264_21210at 107.246 kb on - strand, within CA264_21210at 107.246 kb on - strand, within CA264_21210at 107.286 kb on + strand, within CA264_21210at 107.323 kb on - strand, within CA264_21210at 107.323 kb on - strand, within CA264_21210at 107.349 kb on + strand, within CA264_21210at 107.409 kb on + strand, within CA264_21210at 107.409 kb on + strand, within CA264_21210at 107.409 kb on + strand, within CA264_21210at 107.410 kb on - strand, within CA264_21210at 107.412 kb on + strand, within CA264_21210at 107.412 kb on + strand, within CA264_21210at 107.440 kb on + strand, within CA264_21210at 107.441 kb on - strand, within CA264_21210at 107.444 kb on - strand, within CA264_21210at 107.444 kb on - strand, within CA264_21210

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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105,048 - -0.3
105,048 - +0.0
105,049 + -1.2
105,049 + -0.4
105,049 + -0.1
105,049 + -0.0
105,049 + -0.4
105,050 - -0.3
105,050 - -0.3
105,098 - -0.2
105,098 - -0.1
105,111 + +0.2
105,111 + -1.0
105,112 - -0.1
105,114 + +0.6
105,114 + +1.0
105,115 - +0.7
105,115 - +0.5
105,116 + +1.1
105,116 + -0.8
105,117 - -0.2
105,117 - -2.1
105,117 - -0.4
105,133 - +0.4
105,181 + -0.7
105,182 - -0.2
105,182 - +0.4
105,182 - +1.2
105,182 - -0.3
105,215 + -0.0
105,216 - -0.4
105,237 - +0.4
105,248 - -0.0
105,272 + -0.3
105,272 + +1.4
105,272 + -0.6
105,273 - -0.3
105,273 - -0.4
105,273 - +0.3
105,273 - +0.2
105,273 - -0.3
105,273 - +0.7
105,273 - -0.3
105,329 + CA264_21195 0.21 -0.2
105,330 - CA264_21195 0.21 +0.1
105,339 + CA264_21195 0.23 -0.6
105,389 + CA264_21195 0.34 +0.6
105,390 - CA264_21195 0.35 +0.5
105,390 - CA264_21195 0.35 -0.4
105,451 + CA264_21195 0.49 +0.7
105,502 + CA264_21195 0.60 -0.8
105,503 - CA264_21195 0.60 -0.0
105,585 + CA264_21195 0.79 -0.1
105,621 - CA264_21195 0.87 -0.1
105,624 + CA264_21195 0.88 -1.3
105,654 + +0.0
105,663 + +0.2
105,671 + -0.4
105,672 - +0.1
105,672 - -0.7
105,675 + -0.3
105,675 + -1.5
105,678 + +0.6
105,679 - +0.0
105,679 - +1.3
105,692 - -0.6
105,692 - +0.9
105,692 - +0.9
105,756 - -0.2
105,769 - -0.1
105,793 + -0.3
105,794 - -0.4
105,794 - -1.0
105,809 - +0.2
105,812 + +0.4
105,813 - +0.5
105,815 - +1.1
105,815 - +0.2
105,815 - +0.2
105,815 - -0.4
105,817 - -0.1
105,842 - +1.1
105,922 + -0.7
105,944 + +0.1
105,950 - -0.3
105,955 + +0.2
105,955 + -0.8
105,956 - +0.1
105,957 + -0.6
105,957 + +0.5
105,957 + -0.4
105,957 + -0.1
105,957 + -0.0
105,958 - +0.0
105,958 - -0.3
105,958 - -0.5
105,958 - +0.1
105,958 - -0.2
105,959 + +1.0
105,959 + +1.3
105,960 - +0.6
105,962 + -0.3
105,962 + +0.6
105,976 + -1.7
105,977 - +1.2
106,009 + -0.3
106,097 + CA264_21200 0.15 +0.1
106,097 + CA264_21200 0.15 +0.8
106,098 - CA264_21200 0.15 +1.3
106,129 + CA264_21200 0.20 +0.7
106,136 + CA264_21200 0.21 +0.1
106,157 + CA264_21200 0.25 +0.1
106,175 + CA264_21200 0.28 -0.0
106,176 - CA264_21200 0.28 +0.4
106,316 + CA264_21200 0.52 -0.0
106,316 + CA264_21200 0.52 -0.0
106,317 - CA264_21200 0.52 +0.5
106,364 + CA264_21200 0.60 -0.5
106,365 - CA264_21200 0.60 +0.3
106,365 - CA264_21200 0.60 +0.3
106,381 - CA264_21200 0.63 +0.2
106,483 + CA264_21200 0.80 +0.7
106,484 - CA264_21200 0.81 +0.4
106,484 - CA264_21200 0.81 +0.4
106,484 - CA264_21200 0.81 +2.0
106,502 + CA264_21200 0.84 +0.7
106,503 - CA264_21200 0.84 +0.2
106,503 - CA264_21200 0.84 -0.1
106,504 + CA264_21200 0.84 -0.6
106,515 - CA264_21200 0.86 +2.5
106,515 - CA264_21200 0.86 +0.0
106,604 + -0.3
106,605 - +0.8
106,607 - -0.2
106,607 - +0.2
106,607 - -0.7
106,607 - +0.2
106,609 + +1.4
106,610 - -0.1
106,610 - -0.6
106,611 + +0.2
106,611 + +0.0
106,611 + -0.3
106,611 + -0.3
106,612 - -0.2
106,612 - -0.2
106,613 + +0.4
106,613 + +0.0
106,614 - +0.0
106,614 - +0.9
106,628 - +0.4
106,630 + +0.1
106,631 - -0.4
106,647 - -0.5
106,671 + CA264_21205 0.15 -0.1
106,671 + CA264_21205 0.15 -0.4
106,672 - CA264_21205 0.16 +0.9
106,672 - CA264_21205 0.16 +0.3
106,672 - CA264_21205 0.16 -0.5
106,672 - CA264_21205 0.16 -0.4
106,674 + CA264_21205 0.16 +0.7
106,674 + CA264_21205 0.16 +0.3
106,675 - CA264_21205 0.17 -0.2
106,676 + CA264_21205 0.17 +0.5
106,808 + CA264_21205 0.53 +0.2
106,808 + CA264_21205 0.53 +0.0
106,829 + CA264_21205 0.59 -0.3
106,892 + CA264_21205 0.76 +1.1
106,978 - -0.3
106,979 + -1.1
107,082 - +0.3
107,092 + -0.1
107,093 - +0.4
107,094 + +0.1
107,095 - -0.9
107,095 - -0.6
107,131 + +0.0
107,153 + -0.7
107,160 - +0.6
107,185 + CA264_21210 0.10 -0.4
107,185 + CA264_21210 0.10 -0.5
107,221 + CA264_21210 0.13 -0.1
107,246 - CA264_21210 0.15 +0.1
107,246 - CA264_21210 0.15 +1.1
107,286 + CA264_21210 0.18 +0.3
107,323 - CA264_21210 0.21 -0.1
107,323 - CA264_21210 0.21 -1.0
107,349 + CA264_21210 0.23 +1.2
107,409 + CA264_21210 0.28 -0.7
107,409 + CA264_21210 0.28 +0.1
107,409 + CA264_21210 0.28 -1.0
107,410 - CA264_21210 0.28 -0.5
107,412 + CA264_21210 0.28 -0.1
107,412 + CA264_21210 0.28 -0.8
107,440 + CA264_21210 0.30 -0.3
107,441 - CA264_21210 0.30 +0.3
107,444 - CA264_21210 0.30 +0.1
107,444 - CA264_21210 0.30 +0.5

Or see this region's nucleotide sequence