Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18935 and CA264_18940 are separated by 85 nucleotides CA264_18940 and CA264_18945 overlap by 11 nucleotides CA264_18945 and CA264_18950 are separated by 300 nucleotides CA264_18950 and CA264_18955 are separated by 218 nucleotides CA264_18955 and CA264_18960 are separated by 5 nucleotides
CA264_18935: CA264_18935 - riboflavin biosynthesis protein RibD, at 4,397,033 to 4,397,578
_18935
CA264_18940: CA264_18940 - hypothetical protein, at 4,397,664 to 4,398,071
_18940
CA264_18945: CA264_18945 - hypothetical protein, at 4,398,061 to 4,398,267
_18945
CA264_18950: CA264_18950 - hypothetical protein, at 4,398,568 to 4,398,945
_18950
CA264_18955: CA264_18955 - cytochrome C, at 4,399,164 to 4,399,517
_18955
CA264_18960: CA264_18960 - glucose dehydrogenase, at 4,399,523 to 4,400,980
_18960
Position (kb)
4398
4399 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4397.612 kb on + strand at 4397.612 kb on + strand at 4397.613 kb on - strand at 4397.613 kb on - strand at 4397.613 kb on - strand at 4397.617 kb on - strand at 4397.646 kb on + strand at 4397.669 kb on + strand at 4397.670 kb on - strand at 4397.696 kb on + strand at 4397.697 kb on - strand at 4397.697 kb on - strand at 4397.773 kb on + strand, within CA264_18940 at 4397.773 kb on + strand, within CA264_18940 at 4397.774 kb on - strand, within CA264_18940 at 4397.774 kb on - strand, within CA264_18940 at 4397.774 kb on - strand, within CA264_18940 at 4397.889 kb on - strand, within CA264_18940 at 4397.902 kb on + strand, within CA264_18940 at 4397.935 kb on + strand, within CA264_18940 at 4397.935 kb on + strand, within CA264_18940 at 4397.935 kb on + strand, within CA264_18940 at 4397.936 kb on - strand, within CA264_18940 at 4397.936 kb on - strand, within CA264_18940 at 4397.980 kb on + strand, within CA264_18940 at 4398.062 kb on + strand at 4398.071 kb on + strand at 4398.101 kb on + strand, within CA264_18945 at 4398.110 kb on - strand, within CA264_18945 at 4398.253 kb on + strand at 4398.254 kb on - strand at 4398.258 kb on + strand at 4398.258 kb on + strand at 4398.258 kb on + strand at 4398.258 kb on + strand at 4398.259 kb on - strand at 4398.259 kb on - strand at 4398.292 kb on + strand at 4398.292 kb on + strand at 4398.292 kb on + strand at 4398.292 kb on + strand at 4398.292 kb on + strand at 4398.293 kb on - strand at 4398.293 kb on - strand at 4398.293 kb on - strand at 4398.293 kb on - strand at 4398.296 kb on + strand at 4398.296 kb on + strand at 4398.296 kb on + strand at 4398.296 kb on + strand at 4398.296 kb on + strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.297 kb on - strand at 4398.300 kb on + strand at 4398.300 kb on + strand at 4398.301 kb on - strand at 4398.301 kb on - strand at 4398.302 kb on + strand at 4398.302 kb on + strand at 4398.303 kb on - strand at 4398.319 kb on + strand at 4398.417 kb on - strand at 4398.417 kb on - strand at 4398.431 kb on + strand at 4398.431 kb on + strand at 4398.432 kb on - strand at 4398.432 kb on - strand at 4398.434 kb on - strand at 4398.435 kb on + strand at 4398.462 kb on + strand at 4398.486 kb on + strand at 4398.530 kb on + strand at 4398.530 kb on + strand at 4398.563 kb on + strand at 4398.605 kb on + strand at 4398.608 kb on + strand, within CA264_18950 at 4398.615 kb on + strand, within CA264_18950 at 4398.616 kb on - strand, within CA264_18950 at 4398.781 kb on + strand, within CA264_18950 at 4398.781 kb on + strand, within CA264_18950 at 4398.782 kb on - strand, within CA264_18950 at 4398.809 kb on - strand, within CA264_18950 at 4398.849 kb on - strand, within CA264_18950 at 4398.852 kb on - strand, within CA264_18950 at 4398.853 kb on + strand, within CA264_18950 at 4398.854 kb on - strand, within CA264_18950 at 4398.959 kb on - strand at 4398.960 kb on + strand at 4398.960 kb on + strand at 4398.961 kb on - strand at 4398.961 kb on - strand at 4398.961 kb on - strand at 4398.963 kb on + strand at 4398.964 kb on - strand at 4399.045 kb on + strand at 4399.074 kb on + strand at 4399.092 kb on - strand at 4399.130 kb on + strand at 4399.135 kb on - strand at 4399.158 kb on - strand at 4399.165 kb on + strand at 4399.197 kb on - strand at 4399.202 kb on - strand, within CA264_18955 at 4399.202 kb on - strand, within CA264_18955 at 4399.210 kb on - strand, within CA264_18955 at 4399.260 kb on + strand, within CA264_18955 at 4399.343 kb on + strand, within CA264_18955 at 4399.399 kb on - strand, within CA264_18955 at 4399.415 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.433 kb on + strand, within CA264_18955 at 4399.525 kb on - strand at 4399.525 kb on - strand at 4399.620 kb on + strand at 4399.703 kb on + strand, within CA264_18960 at 4399.769 kb on - strand, within CA264_18960 at 4399.811 kb on - strand, within CA264_18960 at 4399.911 kb on - strand, within CA264_18960
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 4,397,612 + +2.2 4,397,612 + +0.2 4,397,613 - -0.6 4,397,613 - -0.2 4,397,613 - -0.0 4,397,617 - -1.2 4,397,646 + +0.5 4,397,669 + +0.0 4,397,670 - +1.2 4,397,696 + -0.5 4,397,697 - -0.5 4,397,697 - -0.6 4,397,773 + CA264_18940 0.27 +0.1 4,397,773 + CA264_18940 0.27 +1.1 4,397,774 - CA264_18940 0.27 -0.2 4,397,774 - CA264_18940 0.27 +0.1 4,397,774 - CA264_18940 0.27 -1.0 4,397,889 - CA264_18940 0.55 +0.4 4,397,902 + CA264_18940 0.58 -0.5 4,397,935 + CA264_18940 0.66 +0.1 4,397,935 + CA264_18940 0.66 -0.1 4,397,935 + CA264_18940 0.66 -1.4 4,397,936 - CA264_18940 0.67 -1.2 4,397,936 - CA264_18940 0.67 -2.0 4,397,980 + CA264_18940 0.77 -0.1 4,398,062 + +2.0 4,398,071 + +0.2 4,398,101 + CA264_18945 0.19 +1.0 4,398,110 - CA264_18945 0.24 +0.2 4,398,253 + +0.1 4,398,254 - +0.1 4,398,258 + -0.7 4,398,258 + +2.7 4,398,258 + +0.5 4,398,258 + +0.5 4,398,259 - +0.5 4,398,259 - -0.2 4,398,292 + +0.1 4,398,292 + +0.2 4,398,292 + -0.5 4,398,292 + +1.8 4,398,292 + -0.9 4,398,293 - -0.1 4,398,293 - +0.9 4,398,293 - -0.2 4,398,293 - +0.0 4,398,296 + +0.4 4,398,296 + +0.5 4,398,296 + +1.6 4,398,296 + -0.9 4,398,296 + +0.3 4,398,297 - +0.5 4,398,297 - -0.6 4,398,297 - -0.2 4,398,297 - -0.1 4,398,297 - +0.8 4,398,297 - -0.1 4,398,297 - -0.8 4,398,300 + -0.0 4,398,300 + -1.1 4,398,301 - -1.0 4,398,301 - +0.1 4,398,302 + -0.2 4,398,302 + -0.4 4,398,303 - +0.4 4,398,319 + -0.1 4,398,417 - -0.1 4,398,417 - +0.2 4,398,431 + +0.1 4,398,431 + +0.1 4,398,432 - +0.1 4,398,432 - +0.1 4,398,434 - +0.3 4,398,435 + +0.8 4,398,462 + +0.2 4,398,486 + -0.3 4,398,530 + +0.6 4,398,530 + +0.0 4,398,563 + +0.3 4,398,605 + -1.1 4,398,608 + CA264_18950 0.11 -0.2 4,398,615 + CA264_18950 0.12 -0.1 4,398,616 - CA264_18950 0.13 +0.1 4,398,781 + CA264_18950 0.56 -1.3 4,398,781 + CA264_18950 0.56 -0.8 4,398,782 - CA264_18950 0.57 -1.8 4,398,809 - CA264_18950 0.64 -0.2 4,398,849 - CA264_18950 0.74 +0.9 4,398,852 - CA264_18950 0.75 -0.2 4,398,853 + CA264_18950 0.75 -0.5 4,398,854 - CA264_18950 0.76 +0.3 4,398,959 - -0.0 4,398,960 + -1.2 4,398,960 + -0.2 4,398,961 - -0.2 4,398,961 - -0.7 4,398,961 - +0.1 4,398,963 + +0.5 4,398,964 - +0.9 4,399,045 + +0.0 4,399,074 + +0.2 4,399,092 - -0.2 4,399,130 + +1.2 4,399,135 - +0.6 4,399,158 - -0.2 4,399,165 + -0.6 4,399,197 - -0.8 4,399,202 - CA264_18955 0.11 +0.8 4,399,202 - CA264_18955 0.11 -0.4 4,399,210 - CA264_18955 0.13 -0.1 4,399,260 + CA264_18955 0.27 +0.3 4,399,343 + CA264_18955 0.51 -0.2 4,399,399 - CA264_18955 0.66 -0.2 4,399,415 + CA264_18955 0.71 -0.1 4,399,433 + CA264_18955 0.76 +0.6 4,399,433 + CA264_18955 0.76 +0.2 4,399,433 + CA264_18955 0.76 +0.1 4,399,433 + CA264_18955 0.76 -0.0 4,399,433 + CA264_18955 0.76 -1.1 4,399,433 + CA264_18955 0.76 -0.3 4,399,525 - -1.4 4,399,525 - +0.3 4,399,620 + -0.1 4,399,703 + CA264_18960 0.12 -0.8 4,399,769 - CA264_18960 0.17 -0.3 4,399,811 - CA264_18960 0.20 +0.3 4,399,911 - CA264_18960 0.27 +0.7
Or see this region's nucleotide sequence