Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18825 and CA264_18830 are separated by 167 nucleotides CA264_18830 and CA264_18835 are separated by 130 nucleotides CA264_18835 and CA264_18840 are separated by 122 nucleotides
CA264_18825: CA264_18825 - hypothetical protein, at 4,369,945 to 4,370,319
_18825
CA264_18830: CA264_18830 - hypothetical protein, at 4,370,487 to 4,370,897
_18830
CA264_18835: CA264_18835 - MFS transporter, at 4,371,028 to 4,372,209
_18835
CA264_18840: CA264_18840 - AraC family transcriptional regulator, at 4,372,332 to 4,373,198
_18840
Position (kb)
4371
4372
4373 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4370.096 kb on - strand, within CA264_18825 at 4370.103 kb on - strand, within CA264_18825 at 4370.103 kb on - strand, within CA264_18825 at 4370.196 kb on + strand, within CA264_18825 at 4370.196 kb on + strand, within CA264_18825 at 4370.388 kb on + strand at 4370.388 kb on + strand at 4370.389 kb on - strand at 4370.389 kb on - strand at 4370.393 kb on + strand at 4370.411 kb on + strand at 4370.411 kb on + strand at 4370.412 kb on - strand at 4370.455 kb on - strand at 4370.461 kb on - strand at 4370.461 kb on - strand at 4370.467 kb on + strand at 4370.472 kb on - strand at 4370.626 kb on + strand, within CA264_18830 at 4370.626 kb on + strand, within CA264_18830 at 4370.626 kb on + strand, within CA264_18830 at 4370.783 kb on - strand, within CA264_18830 at 4370.822 kb on - strand, within CA264_18830 at 4370.896 kb on - strand at 4370.914 kb on - strand at 4370.918 kb on - strand at 4370.919 kb on + strand at 4370.919 kb on + strand at 4370.920 kb on - strand at 4370.920 kb on - strand at 4370.920 kb on - strand at 4370.920 kb on - strand at 4370.920 kb on - strand at 4370.923 kb on + strand at 4370.924 kb on - strand at 4370.924 kb on - strand at 4370.924 kb on - strand at 4370.924 kb on - strand at 4370.924 kb on - strand at 4370.924 kb on - strand at 4370.925 kb on + strand at 4370.925 kb on + strand at 4370.925 kb on + strand at 4371.007 kb on - strand at 4371.033 kb on + strand at 4371.117 kb on + strand at 4371.140 kb on - strand at 4371.174 kb on + strand, within CA264_18835 at 4371.199 kb on - strand, within CA264_18835 at 4371.327 kb on + strand, within CA264_18835 at 4371.391 kb on + strand, within CA264_18835 at 4371.392 kb on - strand, within CA264_18835 at 4371.395 kb on + strand, within CA264_18835 at 4371.396 kb on - strand, within CA264_18835 at 4371.396 kb on - strand, within CA264_18835 at 4371.396 kb on - strand, within CA264_18835 at 4371.408 kb on + strand, within CA264_18835 at 4371.408 kb on + strand, within CA264_18835 at 4371.415 kb on + strand, within CA264_18835 at 4371.493 kb on + strand, within CA264_18835 at 4371.493 kb on + strand, within CA264_18835 at 4371.493 kb on + strand, within CA264_18835 at 4371.494 kb on - strand, within CA264_18835 at 4371.494 kb on - strand, within CA264_18835 at 4371.521 kb on + strand, within CA264_18835 at 4371.629 kb on + strand, within CA264_18835 at 4371.630 kb on - strand, within CA264_18835 at 4371.654 kb on - strand, within CA264_18835 at 4371.800 kb on - strand, within CA264_18835 at 4371.812 kb on + strand, within CA264_18835 at 4372.025 kb on - strand, within CA264_18835 at 4372.027 kb on - strand, within CA264_18835 at 4372.190 kb on - strand at 4372.231 kb on + strand at 4372.231 kb on + strand at 4372.231 kb on + strand at 4372.232 kb on - strand at 4372.232 kb on - strand at 4372.238 kb on - strand at 4372.275 kb on - strand at 4372.309 kb on + strand at 4372.407 kb on + strand at 4372.408 kb on - strand at 4372.408 kb on - strand at 4372.455 kb on - strand, within CA264_18840 at 4372.476 kb on + strand, within CA264_18840 at 4372.605 kb on - strand, within CA264_18840 at 4372.606 kb on + strand, within CA264_18840 at 4372.607 kb on - strand, within CA264_18840 at 4372.616 kb on - strand, within CA264_18840 at 4372.616 kb on - strand, within CA264_18840 at 4372.688 kb on + strand, within CA264_18840 at 4372.820 kb on - strand, within CA264_18840 at 4372.820 kb on - strand, within CA264_18840 at 4372.820 kb on - strand, within CA264_18840 at 4372.935 kb on - strand, within CA264_18840 at 4372.945 kb on + strand, within CA264_18840 at 4372.945 kb on + strand, within CA264_18840 at 4373.007 kb on - strand, within CA264_18840 at 4373.183 kb on + strand at 4373.183 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 4,370,096 - CA264_18825 0.40 -1.1 4,370,103 - CA264_18825 0.42 -1.8 4,370,103 - CA264_18825 0.42 +0.4 4,370,196 + CA264_18825 0.67 +0.1 4,370,196 + CA264_18825 0.67 +0.7 4,370,388 + +0.4 4,370,388 + -1.4 4,370,389 - -0.2 4,370,389 - -0.2 4,370,393 + -0.1 4,370,411 + +0.7 4,370,411 + +0.8 4,370,412 - +0.2 4,370,455 - +0.2 4,370,461 - -0.3 4,370,461 - +0.1 4,370,467 + +0.2 4,370,472 - +0.3 4,370,626 + CA264_18830 0.34 -0.2 4,370,626 + CA264_18830 0.34 -0.9 4,370,626 + CA264_18830 0.34 -0.0 4,370,783 - CA264_18830 0.72 -0.2 4,370,822 - CA264_18830 0.82 +0.1 4,370,896 - +1.1 4,370,914 - +1.2 4,370,918 - +0.2 4,370,919 + -0.2 4,370,919 + +1.7 4,370,920 - -0.6 4,370,920 - -0.1 4,370,920 - -0.8 4,370,920 - +0.6 4,370,920 - +0.2 4,370,923 + -0.1 4,370,924 - +2.1 4,370,924 - -1.7 4,370,924 - +0.6 4,370,924 - +0.1 4,370,924 - +1.3 4,370,924 - -0.5 4,370,925 + +0.4 4,370,925 + -0.0 4,370,925 + +0.1 4,371,007 - +0.1 4,371,033 + +0.2 4,371,117 + -0.2 4,371,140 - +0.6 4,371,174 + CA264_18835 0.12 +0.2 4,371,199 - CA264_18835 0.14 +0.3 4,371,327 + CA264_18835 0.25 +0.5 4,371,391 + CA264_18835 0.31 -0.1 4,371,392 - CA264_18835 0.31 -0.2 4,371,395 + CA264_18835 0.31 -0.0 4,371,396 - CA264_18835 0.31 +0.6 4,371,396 - CA264_18835 0.31 +0.7 4,371,396 - CA264_18835 0.31 -0.1 4,371,408 + CA264_18835 0.32 +0.0 4,371,408 + CA264_18835 0.32 +1.2 4,371,415 + CA264_18835 0.33 +1.4 4,371,493 + CA264_18835 0.39 -0.2 4,371,493 + CA264_18835 0.39 +0.1 4,371,493 + CA264_18835 0.39 +0.1 4,371,494 - CA264_18835 0.39 +0.1 4,371,494 - CA264_18835 0.39 -0.2 4,371,521 + CA264_18835 0.42 -0.3 4,371,629 + CA264_18835 0.51 +0.4 4,371,630 - CA264_18835 0.51 -1.1 4,371,654 - CA264_18835 0.53 +0.5 4,371,800 - CA264_18835 0.65 +0.5 4,371,812 + CA264_18835 0.66 +0.3 4,372,025 - CA264_18835 0.84 +0.1 4,372,027 - CA264_18835 0.85 -0.7 4,372,190 - -1.3 4,372,231 + -0.3 4,372,231 + +0.2 4,372,231 + +0.3 4,372,232 - -0.5 4,372,232 - -0.0 4,372,238 - +1.3 4,372,275 - -0.3 4,372,309 + -0.4 4,372,407 + +0.5 4,372,408 - -0.0 4,372,408 - +0.7 4,372,455 - CA264_18840 0.14 +0.0 4,372,476 + CA264_18840 0.17 -0.2 4,372,605 - CA264_18840 0.31 +0.0 4,372,606 + CA264_18840 0.32 +0.4 4,372,607 - CA264_18840 0.32 +0.4 4,372,616 - CA264_18840 0.33 -0.3 4,372,616 - CA264_18840 0.33 +0.3 4,372,688 + CA264_18840 0.41 -0.4 4,372,820 - CA264_18840 0.56 -0.1 4,372,820 - CA264_18840 0.56 +0.1 4,372,820 - CA264_18840 0.56 -0.3 4,372,935 - CA264_18840 0.70 -0.4 4,372,945 + CA264_18840 0.71 +0.8 4,372,945 + CA264_18840 0.71 -0.1 4,373,007 - CA264_18840 0.78 +1.0 4,373,183 + +0.2 4,373,183 + +0.1
Or see this region's nucleotide sequence