Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16420 and CA264_16425 are separated by 204 nucleotides CA264_16425 and CA264_16430 are separated by 182 nucleotides
CA264_16420: CA264_16420 - molecular chaperone HtpG, at 3,818,556 to 3,820,373
_16420
CA264_16425: CA264_16425 - hypothetical protein, at 3,820,578 to 3,820,901
_16425
CA264_16430: CA264_16430 - TonB dependent receptor, at 3,821,084 to 3,823,462
_16430
Position (kb)
3820
3821 Strain fitness (log2 ratio)
-1
0
1
2 at 3819.590 kb on - strand, within CA264_16420 at 3819.597 kb on - strand, within CA264_16420 at 3819.597 kb on - strand, within CA264_16420 at 3819.621 kb on + strand, within CA264_16420 at 3819.621 kb on + strand, within CA264_16420 at 3819.621 kb on + strand, within CA264_16420 at 3819.622 kb on - strand, within CA264_16420 at 3819.622 kb on - strand, within CA264_16420 at 3819.622 kb on - strand, within CA264_16420 at 3819.622 kb on - strand at 3819.686 kb on + strand, within CA264_16420 at 3819.686 kb on + strand, within CA264_16420 at 3819.687 kb on - strand, within CA264_16420 at 3819.688 kb on + strand, within CA264_16420 at 3819.688 kb on + strand, within CA264_16420 at 3819.689 kb on - strand, within CA264_16420 at 3819.689 kb on - strand, within CA264_16420 at 3819.790 kb on + strand, within CA264_16420 at 3819.790 kb on + strand, within CA264_16420 at 3819.790 kb on + strand, within CA264_16420 at 3819.794 kb on + strand, within CA264_16420 at 3819.794 kb on + strand, within CA264_16420 at 3819.794 kb on + strand, within CA264_16420 at 3819.801 kb on + strand at 3819.801 kb on + strand, within CA264_16420 at 3819.801 kb on + strand, within CA264_16420 at 3819.801 kb on + strand, within CA264_16420 at 3819.802 kb on - strand, within CA264_16420 at 3819.802 kb on - strand, within CA264_16420 at 3819.802 kb on - strand, within CA264_16420 at 3819.802 kb on - strand, within CA264_16420 at 3819.803 kb on + strand, within CA264_16420 at 3819.803 kb on + strand, within CA264_16420 at 3819.806 kb on + strand, within CA264_16420 at 3819.855 kb on + strand, within CA264_16420 at 3819.856 kb on - strand, within CA264_16420 at 3819.897 kb on - strand, within CA264_16420 at 3819.971 kb on + strand, within CA264_16420 at 3819.971 kb on + strand, within CA264_16420 at 3819.971 kb on + strand, within CA264_16420 at 3819.972 kb on - strand, within CA264_16420 at 3819.992 kb on + strand, within CA264_16420 at 3819.993 kb on - strand, within CA264_16420 at 3819.993 kb on - strand, within CA264_16420 at 3820.106 kb on - strand, within CA264_16420 at 3820.131 kb on - strand, within CA264_16420 at 3820.173 kb on - strand, within CA264_16420 at 3820.226 kb on + strand at 3820.268 kb on + strand at 3820.355 kb on + strand at 3820.355 kb on + strand at 3820.355 kb on + strand at 3820.356 kb on - strand at 3820.380 kb on + strand at 3820.381 kb on - strand at 3820.381 kb on - strand at 3820.385 kb on + strand at 3820.387 kb on + strand at 3820.388 kb on - strand at 3820.389 kb on + strand at 3820.389 kb on + strand at 3820.389 kb on + strand at 3820.389 kb on + strand at 3820.394 kb on + strand at 3820.394 kb on + strand at 3820.394 kb on + strand at 3820.524 kb on + strand at 3820.550 kb on + strand at 3820.553 kb on - strand at 3820.598 kb on + strand at 3820.599 kb on - strand at 3820.822 kb on + strand, within CA264_16425 at 3820.822 kb on + strand, within CA264_16425 at 3820.822 kb on + strand, within CA264_16425 at 3820.823 kb on - strand, within CA264_16425 at 3820.823 kb on - strand, within CA264_16425 at 3820.823 kb on - strand, within CA264_16425 at 3820.824 kb on + strand, within CA264_16425 at 3820.824 kb on + strand, within CA264_16425 at 3820.825 kb on - strand, within CA264_16425 at 3820.838 kb on + strand, within CA264_16425 at 3820.838 kb on + strand, within CA264_16425 at 3820.839 kb on - strand, within CA264_16425 at 3820.842 kb on + strand, within CA264_16425 at 3820.843 kb on - strand, within CA264_16425 at 3820.870 kb on + strand at 3820.872 kb on + strand at 3820.873 kb on - strand at 3820.873 kb on - strand at 3820.873 kb on - strand at 3820.973 kb on + strand at 3820.976 kb on + strand at 3820.977 kb on - strand at 3821.043 kb on + strand at 3821.044 kb on - strand at 3821.047 kb on - strand at 3821.049 kb on - strand at 3821.227 kb on - strand at 3821.227 kb on - strand at 3821.227 kb on - strand at 3821.270 kb on + strand at 3821.318 kb on + strand at 3821.318 kb on + strand at 3821.319 kb on - strand at 3821.319 kb on - strand at 3821.349 kb on - strand, within CA264_16430 at 3821.349 kb on - strand, within CA264_16430 at 3821.349 kb on - strand, within CA264_16430 at 3821.413 kb on + strand, within CA264_16430 at 3821.608 kb on + strand, within CA264_16430 at 3821.785 kb on + strand, within CA264_16430 at 3821.787 kb on + strand, within CA264_16430 at 3821.788 kb on - strand, within CA264_16430 at 3821.830 kb on - strand, within CA264_16430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 3,819,590 - CA264_16420 0.57 -0.3 3,819,597 - CA264_16420 0.57 +0.0 3,819,597 - CA264_16420 0.57 +0.7 3,819,621 + CA264_16420 0.59 -0.3 3,819,621 + CA264_16420 0.59 +0.3 3,819,621 + CA264_16420 0.59 +0.8 3,819,622 - CA264_16420 0.59 +0.4 3,819,622 - CA264_16420 0.59 +0.3 3,819,622 - CA264_16420 0.59 +0.2 3,819,622 - +0.9 3,819,686 + CA264_16420 0.62 -0.6 3,819,686 + CA264_16420 0.62 +0.2 3,819,687 - CA264_16420 0.62 -0.8 3,819,688 + CA264_16420 0.62 +0.1 3,819,688 + CA264_16420 0.62 -1.4 3,819,689 - CA264_16420 0.62 -0.1 3,819,689 - CA264_16420 0.62 -0.3 3,819,790 + CA264_16420 0.68 +0.3 3,819,790 + CA264_16420 0.68 +0.7 3,819,790 + CA264_16420 0.68 +1.4 3,819,794 + CA264_16420 0.68 -0.1 3,819,794 + CA264_16420 0.68 +1.1 3,819,794 + CA264_16420 0.68 -0.6 3,819,801 + +2.1 3,819,801 + CA264_16420 0.68 +0.9 3,819,801 + CA264_16420 0.68 +0.8 3,819,801 + CA264_16420 0.68 +0.7 3,819,802 - CA264_16420 0.69 -0.6 3,819,802 - CA264_16420 0.69 +1.4 3,819,802 - CA264_16420 0.69 +1.4 3,819,802 - CA264_16420 0.69 +0.4 3,819,803 + CA264_16420 0.69 -0.9 3,819,803 + CA264_16420 0.69 +1.2 3,819,806 + CA264_16420 0.69 +0.1 3,819,855 + CA264_16420 0.71 -0.4 3,819,856 - CA264_16420 0.72 +0.2 3,819,897 - CA264_16420 0.74 +2.1 3,819,971 + CA264_16420 0.78 -0.4 3,819,971 + CA264_16420 0.78 +0.2 3,819,971 + CA264_16420 0.78 +0.5 3,819,972 - CA264_16420 0.78 +0.7 3,819,992 + CA264_16420 0.79 +1.9 3,819,993 - CA264_16420 0.79 +0.7 3,819,993 - CA264_16420 0.79 -0.1 3,820,106 - CA264_16420 0.85 -0.3 3,820,131 - CA264_16420 0.87 +0.0 3,820,173 - CA264_16420 0.89 -0.4 3,820,226 + +0.6 3,820,268 + +1.5 3,820,355 + +0.0 3,820,355 + +0.2 3,820,355 + -0.3 3,820,356 - -0.6 3,820,380 + +0.3 3,820,381 - +0.2 3,820,381 - +0.2 3,820,385 + -0.2 3,820,387 + -0.8 3,820,388 - +0.2 3,820,389 + -0.6 3,820,389 + +0.7 3,820,389 + -0.3 3,820,389 + +0.7 3,820,394 + -0.3 3,820,394 + +0.3 3,820,394 + +0.5 3,820,524 + -0.2 3,820,550 + -0.3 3,820,553 - -0.2 3,820,598 + -0.1 3,820,599 - +0.1 3,820,822 + CA264_16425 0.75 +0.6 3,820,822 + CA264_16425 0.75 +0.2 3,820,822 + CA264_16425 0.75 -0.3 3,820,823 - CA264_16425 0.76 +0.8 3,820,823 - CA264_16425 0.76 -1.1 3,820,823 - CA264_16425 0.76 -1.0 3,820,824 + CA264_16425 0.76 +0.2 3,820,824 + CA264_16425 0.76 -0.3 3,820,825 - CA264_16425 0.76 +0.6 3,820,838 + CA264_16425 0.80 -0.0 3,820,838 + CA264_16425 0.80 -1.4 3,820,839 - CA264_16425 0.81 +1.1 3,820,842 + CA264_16425 0.81 -0.3 3,820,843 - CA264_16425 0.82 +0.1 3,820,870 + -0.5 3,820,872 + -0.4 3,820,873 - -0.3 3,820,873 - +0.1 3,820,873 - -0.2 3,820,973 + -0.2 3,820,976 + -0.3 3,820,977 - +0.2 3,821,043 + +0.0 3,821,044 - +0.5 3,821,047 - +0.4 3,821,049 - -0.1 3,821,227 - +0.4 3,821,227 - -0.3 3,821,227 - -0.4 3,821,270 + -1.0 3,821,318 + -0.3 3,821,318 + +1.7 3,821,319 - +0.2 3,821,319 - +0.9 3,821,349 - CA264_16430 0.11 -0.6 3,821,349 - CA264_16430 0.11 -0.3 3,821,349 - CA264_16430 0.11 +0.8 3,821,413 + CA264_16430 0.14 -0.3 3,821,608 + CA264_16430 0.22 -1.7 3,821,785 + CA264_16430 0.29 +1.0 3,821,787 + CA264_16430 0.30 +0.1 3,821,788 - CA264_16430 0.30 +0.4 3,821,830 - CA264_16430 0.31 +0.6
Or see this region's nucleotide sequence