Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13915 and CA264_13920 are separated by 608 nucleotides CA264_13920 and CA264_13925 are separated by 122 nucleotides
CA264_13915: CA264_13915 - PAS domain-containing sensor histidine kinase, at 3,247,039 to 3,248,583
_13915
CA264_13920: CA264_13920 - PutA protein, at 3,249,192 to 3,250,274
_13920
CA264_13925: CA264_13925 - cytochrome c oxidase subunit I, at 3,250,397 to 3,252,217
_13925
Position (kb)
3249
3250
3251 Strain fitness (log2 ratio)
-2
-1
0
1 at 3248.252 kb on - strand, within CA264_13915 at 3248.320 kb on - strand, within CA264_13915 at 3248.345 kb on + strand, within CA264_13915 at 3248.345 kb on + strand, within CA264_13915 at 3248.485 kb on + strand at 3248.485 kb on - strand at 3248.493 kb on + strand at 3248.493 kb on + strand at 3248.496 kb on + strand at 3248.519 kb on - strand at 3248.589 kb on - strand at 3248.605 kb on + strand at 3248.606 kb on - strand at 3248.606 kb on - strand at 3248.738 kb on + strand at 3248.802 kb on - strand at 3248.841 kb on - strand at 3248.929 kb on - strand at 3249.019 kb on + strand at 3249.034 kb on + strand at 3249.061 kb on + strand at 3249.062 kb on - strand at 3249.062 kb on - strand at 3249.062 kb on - strand at 3249.062 kb on - strand at 3249.062 kb on - strand at 3249.062 kb on - strand at 3249.069 kb on - strand at 3249.074 kb on + strand at 3249.074 kb on + strand at 3249.382 kb on - strand, within CA264_13920 at 3249.481 kb on - strand, within CA264_13920 at 3249.481 kb on - strand, within CA264_13920 at 3249.496 kb on + strand, within CA264_13920 at 3249.637 kb on + strand, within CA264_13920 at 3249.640 kb on - strand, within CA264_13920 at 3249.640 kb on - strand, within CA264_13920 at 3249.708 kb on + strand, within CA264_13920 at 3249.771 kb on + strand, within CA264_13920 at 3249.844 kb on - strand, within CA264_13920 at 3249.970 kb on + strand, within CA264_13920 at 3250.011 kb on + strand, within CA264_13920 at 3250.133 kb on - strand, within CA264_13920 at 3250.140 kb on + strand, within CA264_13920 at 3250.184 kb on - strand at 3250.256 kb on - strand at 3250.272 kb on + strand at 3250.381 kb on - strand at 3250.399 kb on - strand at 3250.467 kb on + strand at 3250.494 kb on + strand at 3250.495 kb on - strand at 3250.500 kb on + strand at 3250.524 kb on - strand at 3250.629 kb on + strand, within CA264_13925 at 3250.634 kb on - strand, within CA264_13925 at 3250.634 kb on - strand, within CA264_13925 at 3250.651 kb on + strand, within CA264_13925 at 3250.651 kb on + strand, within CA264_13925 at 3250.688 kb on + strand, within CA264_13925 at 3250.689 kb on - strand, within CA264_13925 at 3250.715 kb on - strand, within CA264_13925 at 3250.743 kb on + strand, within CA264_13925 at 3250.746 kb on + strand, within CA264_13925 at 3250.747 kb on - strand, within CA264_13925 at 3250.776 kb on + strand, within CA264_13925 at 3250.800 kb on + strand, within CA264_13925 at 3250.833 kb on + strand, within CA264_13925 at 3250.834 kb on - strand, within CA264_13925 at 3250.885 kb on - strand, within CA264_13925 at 3250.953 kb on + strand, within CA264_13925 at 3250.953 kb on + strand, within CA264_13925 at 3250.953 kb on + strand, within CA264_13925 at 3251.021 kb on - strand, within CA264_13925 at 3251.040 kb on - strand, within CA264_13925 at 3251.102 kb on - strand, within CA264_13925 at 3251.131 kb on + strand, within CA264_13925 at 3251.131 kb on + strand, within CA264_13925 at 3251.131 kb on + strand, within CA264_13925 at 3251.205 kb on - strand, within CA264_13925 at 3251.236 kb on + strand, within CA264_13925
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 3,248,252 - CA264_13915 0.79 -1.2 3,248,320 - CA264_13915 0.83 -0.7 3,248,345 + CA264_13915 0.85 -0.5 3,248,345 + CA264_13915 0.85 +0.1 3,248,485 + -0.3 3,248,485 - +0.3 3,248,493 + +0.3 3,248,493 + +0.4 3,248,496 + +0.4 3,248,519 - -0.3 3,248,589 - -0.5 3,248,605 + +0.8 3,248,606 - +0.6 3,248,606 - -2.1 3,248,738 + -0.4 3,248,802 - +0.2 3,248,841 - +1.1 3,248,929 - +0.7 3,249,019 + +0.1 3,249,034 + +0.8 3,249,061 + -0.3 3,249,062 - -0.3 3,249,062 - +0.3 3,249,062 - +0.5 3,249,062 - +0.0 3,249,062 - +0.3 3,249,062 - -0.2 3,249,069 - +0.8 3,249,074 + +0.1 3,249,074 + +0.9 3,249,382 - CA264_13920 0.18 -1.0 3,249,481 - CA264_13920 0.27 +0.3 3,249,481 - CA264_13920 0.27 +0.4 3,249,496 + CA264_13920 0.28 -1.0 3,249,637 + CA264_13920 0.41 +0.2 3,249,640 - CA264_13920 0.41 +1.0 3,249,640 - CA264_13920 0.41 +1.0 3,249,708 + CA264_13920 0.48 -0.1 3,249,771 + CA264_13920 0.53 +0.4 3,249,844 - CA264_13920 0.60 -0.4 3,249,970 + CA264_13920 0.72 -1.8 3,250,011 + CA264_13920 0.76 +1.0 3,250,133 - CA264_13920 0.87 +0.1 3,250,140 + CA264_13920 0.88 +0.3 3,250,184 - +0.5 3,250,256 - -0.4 3,250,272 + -0.3 3,250,381 - +1.4 3,250,399 - -0.0 3,250,467 + -0.1 3,250,494 + +0.8 3,250,495 - -0.1 3,250,500 + +0.1 3,250,524 - -0.3 3,250,629 + CA264_13925 0.13 -0.1 3,250,634 - CA264_13925 0.13 -0.7 3,250,634 - CA264_13925 0.13 +0.6 3,250,651 + CA264_13925 0.14 -0.4 3,250,651 + CA264_13925 0.14 +0.9 3,250,688 + CA264_13925 0.16 -1.0 3,250,689 - CA264_13925 0.16 +0.2 3,250,715 - CA264_13925 0.17 -0.1 3,250,743 + CA264_13925 0.19 -1.1 3,250,746 + CA264_13925 0.19 +0.1 3,250,747 - CA264_13925 0.19 -0.5 3,250,776 + CA264_13925 0.21 -0.2 3,250,800 + CA264_13925 0.22 -1.7 3,250,833 + CA264_13925 0.24 -0.4 3,250,834 - CA264_13925 0.24 -0.3 3,250,885 - CA264_13925 0.27 -0.3 3,250,953 + CA264_13925 0.31 -0.9 3,250,953 + CA264_13925 0.31 +0.2 3,250,953 + CA264_13925 0.31 +0.1 3,251,021 - CA264_13925 0.34 -0.5 3,251,040 - CA264_13925 0.35 -0.2 3,251,102 - CA264_13925 0.39 -0.1 3,251,131 + CA264_13925 0.40 +0.3 3,251,131 + CA264_13925 0.40 -1.4 3,251,131 + CA264_13925 0.40 -0.2 3,251,205 - CA264_13925 0.44 -0.3 3,251,236 + CA264_13925 0.46 +0.7
Or see this region's nucleotide sequence