Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10685 and CA264_10690 are separated by 15 nucleotides CA264_10690 and CA264_10695 overlap by 8 nucleotides CA264_10695 and CA264_10700 overlap by 11 nucleotides
CA264_10685: CA264_10685 - anti-anti-sigma factor, at 2,467,499 to 2,468,371
_10685
CA264_10690: CA264_10690 - anti-anti-sigma factor, at 2,468,387 to 2,468,797
_10690
CA264_10695: CA264_10695 - anti-sigma regulatory factor, at 2,468,790 to 2,469,194
_10695
CA264_10700: CA264_10700 - stage II sporulation protein E, at 2,469,184 to 2,470,212
_10700
Position (kb)
2468
2469
2470 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2467.850 kb on + strand, within CA264_10685 at 2467.983 kb on + strand, within CA264_10685 at 2467.984 kb on - strand, within CA264_10685 at 2467.984 kb on - strand, within CA264_10685 at 2468.079 kb on + strand, within CA264_10685 at 2468.104 kb on - strand, within CA264_10685 at 2468.181 kb on + strand, within CA264_10685 at 2468.197 kb on + strand, within CA264_10685 at 2468.212 kb on - strand, within CA264_10685 at 2468.328 kb on + strand at 2468.374 kb on + strand at 2468.375 kb on - strand at 2468.375 kb on - strand at 2468.421 kb on - strand at 2468.430 kb on + strand, within CA264_10690 at 2468.431 kb on - strand, within CA264_10690 at 2468.448 kb on + strand, within CA264_10690 at 2468.449 kb on - strand, within CA264_10690 at 2468.450 kb on + strand, within CA264_10690 at 2468.450 kb on + strand, within CA264_10690 at 2468.451 kb on - strand, within CA264_10690 at 2468.451 kb on - strand, within CA264_10690 at 2468.530 kb on + strand, within CA264_10690 at 2468.575 kb on - strand, within CA264_10690 at 2468.578 kb on + strand, within CA264_10690 at 2468.622 kb on + strand, within CA264_10690 at 2468.625 kb on + strand, within CA264_10690 at 2468.625 kb on + strand, within CA264_10690 at 2468.686 kb on - strand, within CA264_10690 at 2468.688 kb on - strand, within CA264_10690 at 2468.688 kb on - strand, within CA264_10690 at 2468.788 kb on + strand at 2468.789 kb on - strand at 2468.830 kb on + strand at 2468.831 kb on - strand, within CA264_10695 at 2468.852 kb on - strand, within CA264_10695 at 2469.133 kb on + strand, within CA264_10695 at 2469.165 kb on - strand at 2469.201 kb on + strand at 2469.201 kb on + strand at 2469.201 kb on + strand at 2469.202 kb on - strand at 2469.230 kb on - strand at 2469.333 kb on + strand, within CA264_10700 at 2469.334 kb on - strand, within CA264_10700 at 2469.334 kb on - strand, within CA264_10700 at 2469.396 kb on - strand, within CA264_10700 at 2469.469 kb on + strand, within CA264_10700 at 2469.639 kb on + strand, within CA264_10700 at 2469.639 kb on + strand, within CA264_10700 at 2469.640 kb on - strand, within CA264_10700 at 2469.681 kb on - strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.699 kb on - strand, within CA264_10700 at 2469.699 kb on - strand, within CA264_10700 at 2469.701 kb on - strand, within CA264_10700 at 2469.773 kb on - strand, within CA264_10700 at 2469.773 kb on - strand, within CA264_10700 at 2469.863 kb on + strand, within CA264_10700 at 2469.885 kb on + strand, within CA264_10700 at 2469.886 kb on - strand, within CA264_10700 at 2469.896 kb on - strand, within CA264_10700 at 2469.929 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2470.059 kb on - strand, within CA264_10700 at 2470.059 kb on - strand, within CA264_10700 at 2470.150 kb on + strand at 2470.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,467,850 + CA264_10685 0.40 -0.3 2,467,983 + CA264_10685 0.55 -0.4 2,467,984 - CA264_10685 0.56 +0.3 2,467,984 - CA264_10685 0.56 -0.3 2,468,079 + CA264_10685 0.66 +0.4 2,468,104 - CA264_10685 0.69 +0.3 2,468,181 + CA264_10685 0.78 -1.8 2,468,197 + CA264_10685 0.80 -0.3 2,468,212 - CA264_10685 0.82 +0.2 2,468,328 + -1.5 2,468,374 + -0.0 2,468,375 - +0.6 2,468,375 - +0.8 2,468,421 - -0.7 2,468,430 + CA264_10690 0.10 -0.0 2,468,431 - CA264_10690 0.11 +0.2 2,468,448 + CA264_10690 0.15 -0.4 2,468,449 - CA264_10690 0.15 +1.4 2,468,450 + CA264_10690 0.15 -0.5 2,468,450 + CA264_10690 0.15 -1.6 2,468,451 - CA264_10690 0.16 -0.2 2,468,451 - CA264_10690 0.16 -1.6 2,468,530 + CA264_10690 0.35 -1.3 2,468,575 - CA264_10690 0.46 +0.5 2,468,578 + CA264_10690 0.46 -1.0 2,468,622 + CA264_10690 0.57 +1.7 2,468,625 + CA264_10690 0.58 -0.2 2,468,625 + CA264_10690 0.58 -0.9 2,468,686 - CA264_10690 0.73 +2.6 2,468,688 - CA264_10690 0.73 -0.2 2,468,688 - CA264_10690 0.73 +0.7 2,468,788 + -0.0 2,468,789 - -0.7 2,468,830 + +1.2 2,468,831 - CA264_10695 0.10 -0.3 2,468,852 - CA264_10695 0.15 -0.1 2,469,133 + CA264_10695 0.85 -0.9 2,469,165 - +0.4 2,469,201 + +1.0 2,469,201 + -0.6 2,469,201 + -0.3 2,469,202 - +0.1 2,469,230 - +0.9 2,469,333 + CA264_10700 0.14 +0.1 2,469,334 - CA264_10700 0.15 +0.3 2,469,334 - CA264_10700 0.15 -0.8 2,469,396 - CA264_10700 0.21 +1.7 2,469,469 + CA264_10700 0.28 +0.9 2,469,639 + CA264_10700 0.44 -0.9 2,469,639 + CA264_10700 0.44 +0.7 2,469,640 - CA264_10700 0.44 +0.1 2,469,681 - CA264_10700 0.48 +0.4 2,469,698 + CA264_10700 0.50 -0.3 2,469,698 + CA264_10700 0.50 -0.7 2,469,698 + CA264_10700 0.50 -0.1 2,469,699 - CA264_10700 0.50 -1.0 2,469,699 - CA264_10700 0.50 +0.2 2,469,701 - CA264_10700 0.50 +0.0 2,469,773 - CA264_10700 0.57 +0.1 2,469,773 - CA264_10700 0.57 -1.0 2,469,863 + CA264_10700 0.66 +0.2 2,469,885 + CA264_10700 0.68 -0.0 2,469,886 - CA264_10700 0.68 +1.1 2,469,896 - CA264_10700 0.69 +0.2 2,469,929 - CA264_10700 0.72 +0.0 2,469,980 - CA264_10700 0.77 +0.1 2,469,980 - CA264_10700 0.77 -0.2 2,469,980 - CA264_10700 0.77 -0.3 2,470,059 - CA264_10700 0.85 +0.1 2,470,059 - CA264_10700 0.85 +0.2 2,470,150 + +0.2 2,470,151 - -0.1
Or see this region's nucleotide sequence