Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09015 and CA264_09020 are separated by 355 nucleotides CA264_09020 and CA264_09025 are separated by 95 nucleotides
CA264_09015: CA264_09015 - acyl-CoA dehydrogenase, at 2,104,812 to 2,105,966
_09015
CA264_09020: CA264_09020 - alpha/beta hydrolase, at 2,106,322 to 2,107,107
_09020
CA264_09025: CA264_09025 - peptidase M28, at 2,107,203 to 2,108,855
_09025
Position (kb)
2106
2107
2108 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2105.478 kb on - strand, within CA264_09015 at 2105.488 kb on + strand, within CA264_09015 at 2105.488 kb on + strand, within CA264_09015 at 2105.584 kb on + strand, within CA264_09015 at 2105.648 kb on + strand, within CA264_09015 at 2105.648 kb on + strand, within CA264_09015 at 2105.649 kb on - strand, within CA264_09015 at 2105.930 kb on + strand at 2105.949 kb on + strand at 2105.988 kb on + strand at 2105.988 kb on + strand at 2105.989 kb on - strand at 2105.990 kb on + strand at 2105.990 kb on + strand at 2105.991 kb on - strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.992 kb on + strand at 2105.993 kb on - strand at 2105.993 kb on - strand at 2105.993 kb on - strand at 2105.999 kb on + strand at 2106.038 kb on - strand at 2106.058 kb on + strand at 2106.058 kb on + strand at 2106.059 kb on - strand at 2106.059 kb on - strand at 2106.060 kb on + strand at 2106.060 kb on + strand at 2106.060 kb on + strand at 2106.061 kb on - strand at 2106.080 kb on + strand at 2106.106 kb on - strand at 2106.118 kb on - strand at 2106.128 kb on + strand at 2106.129 kb on - strand at 2106.163 kb on - strand at 2106.164 kb on + strand at 2106.165 kb on - strand at 2106.275 kb on + strand at 2106.275 kb on + strand at 2106.299 kb on + strand at 2106.300 kb on - strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.355 kb on + strand at 2106.402 kb on + strand, within CA264_09020 at 2106.423 kb on - strand, within CA264_09020 at 2106.428 kb on + strand, within CA264_09020 at 2106.429 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.432 kb on - strand, within CA264_09020 at 2106.464 kb on + strand, within CA264_09020 at 2106.470 kb on - strand, within CA264_09020 at 2106.499 kb on - strand, within CA264_09020 at 2106.509 kb on - strand, within CA264_09020 at 2106.514 kb on - strand, within CA264_09020 at 2106.523 kb on - strand, within CA264_09020 at 2106.540 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.549 kb on - strand, within CA264_09020 at 2106.630 kb on - strand, within CA264_09020 at 2106.728 kb on - strand, within CA264_09020 at 2106.732 kb on + strand, within CA264_09020 at 2106.733 kb on - strand, within CA264_09020 at 2106.760 kb on - strand, within CA264_09020 at 2106.762 kb on - strand, within CA264_09020 at 2106.793 kb on + strand, within CA264_09020 at 2106.794 kb on - strand, within CA264_09020 at 2106.871 kb on + strand, within CA264_09020 at 2106.926 kb on + strand, within CA264_09020 at 2106.927 kb on - strand, within CA264_09020 at 2106.950 kb on + strand, within CA264_09020 at 2106.951 kb on - strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.002 kb on + strand, within CA264_09020 at 2107.003 kb on - strand, within CA264_09020 at 2107.003 kb on - strand, within CA264_09020 at 2107.016 kb on + strand, within CA264_09020 at 2107.023 kb on - strand, within CA264_09020 at 2107.046 kb on + strand at 2107.046 kb on + strand at 2107.121 kb on - strand at 2107.122 kb on + strand at 2107.126 kb on + strand at 2107.126 kb on + strand at 2107.152 kb on - strand at 2107.163 kb on - strand at 2107.184 kb on + strand at 2107.216 kb on + strand at 2107.216 kb on + strand at 2107.229 kb on + strand at 2107.230 kb on - strand at 2107.230 kb on - strand at 2107.280 kb on - strand at 2107.328 kb on - strand at 2107.328 kb on - strand at 2107.344 kb on + strand at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.410 kb on + strand, within CA264_09025 at 2107.502 kb on + strand, within CA264_09025 at 2107.515 kb on - strand, within CA264_09025 at 2107.515 kb on - strand, within CA264_09025 at 2107.579 kb on + strand, within CA264_09025 at 2107.579 kb on + strand, within CA264_09025 at 2107.580 kb on - strand, within CA264_09025 at 2107.606 kb on + strand, within CA264_09025 at 2107.606 kb on + strand, within CA264_09025 at 2107.669 kb on - strand, within CA264_09025 at 2107.677 kb on + strand, within CA264_09025 at 2107.677 kb on + strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.678 kb on - strand, within CA264_09025 at 2107.682 kb on + strand, within CA264_09025 at 2107.682 kb on + strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.683 kb on - strand, within CA264_09025 at 2107.687 kb on + strand, within CA264_09025 at 2107.687 kb on + strand, within CA264_09025 at 2107.688 kb on - strand, within CA264_09025 at 2107.700 kb on + strand, within CA264_09025 at 2107.711 kb on + strand, within CA264_09025 at 2107.715 kb on + strand, within CA264_09025 at 2107.716 kb on - strand, within CA264_09025 at 2107.716 kb on - strand, within CA264_09025 at 2107.751 kb on - strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.758 kb on + strand, within CA264_09025 at 2107.787 kb on + strand, within CA264_09025 at 2107.826 kb on + strand, within CA264_09025 at 2107.829 kb on + strand, within CA264_09025 at 2107.879 kb on + strand, within CA264_09025 at 2107.882 kb on + strand, within CA264_09025 at 2107.882 kb on + strand, within CA264_09025 at 2107.883 kb on - strand, within CA264_09025 at 2107.883 kb on - strand, within CA264_09025 at 2107.917 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.931 kb on + strand, within CA264_09025 at 2107.932 kb on - strand, within CA264_09025 at 2107.932 kb on - strand, within CA264_09025 at 2108.070 kb on + strand, within CA264_09025 at 2108.076 kb on - strand, within CA264_09025 at 2108.100 kb on + strand, within CA264_09025 at 2108.101 kb on - strand, within CA264_09025
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,105,478 - CA264_09015 0.58 +0.3 2,105,488 + CA264_09015 0.59 +0.6 2,105,488 + CA264_09015 0.59 +0.8 2,105,584 + CA264_09015 0.67 -0.6 2,105,648 + CA264_09015 0.72 -0.1 2,105,648 + CA264_09015 0.72 +0.1 2,105,649 - CA264_09015 0.72 +0.2 2,105,930 + -0.3 2,105,949 + -0.3 2,105,988 + -0.3 2,105,988 + +0.9 2,105,989 - +2.0 2,105,990 + +0.3 2,105,990 + -0.0 2,105,991 - -0.1 2,105,992 + +0.7 2,105,992 + +0.5 2,105,992 + +0.3 2,105,992 + -0.1 2,105,993 - -0.2 2,105,993 - +0.2 2,105,993 - +0.4 2,105,999 + +0.1 2,106,038 - +0.3 2,106,058 + +0.1 2,106,058 + -2.0 2,106,059 - +0.2 2,106,059 - -1.0 2,106,060 + -0.1 2,106,060 + -0.2 2,106,060 + -0.2 2,106,061 - +0.5 2,106,080 + -0.4 2,106,106 - +0.0 2,106,118 - +0.5 2,106,128 + -0.8 2,106,129 - +2.0 2,106,163 - -0.2 2,106,164 + -1.3 2,106,165 - -2.0 2,106,275 + -0.1 2,106,275 + -1.4 2,106,299 + +0.6 2,106,300 - -1.4 2,106,355 + +0.4 2,106,355 + +0.2 2,106,355 + -0.1 2,106,402 + CA264_09020 0.10 +0.0 2,106,423 - CA264_09020 0.13 -0.3 2,106,428 + CA264_09020 0.13 +0.1 2,106,429 - CA264_09020 0.14 -0.4 2,106,432 - CA264_09020 0.14 -0.3 2,106,432 - CA264_09020 0.14 -0.2 2,106,432 - CA264_09020 0.14 -0.1 2,106,432 - CA264_09020 0.14 -0.1 2,106,464 + CA264_09020 0.18 +0.3 2,106,470 - CA264_09020 0.19 -0.9 2,106,499 - CA264_09020 0.23 -0.2 2,106,509 - CA264_09020 0.24 -0.9 2,106,514 - CA264_09020 0.24 -0.4 2,106,523 - CA264_09020 0.26 +0.0 2,106,540 - CA264_09020 0.28 +1.1 2,106,549 - CA264_09020 0.29 +0.4 2,106,549 - CA264_09020 0.29 +0.2 2,106,630 - CA264_09020 0.39 -0.3 2,106,728 - CA264_09020 0.52 +0.3 2,106,732 + CA264_09020 0.52 -0.2 2,106,733 - CA264_09020 0.52 -0.1 2,106,760 - CA264_09020 0.56 -1.9 2,106,762 - CA264_09020 0.56 +0.3 2,106,793 + CA264_09020 0.60 -0.8 2,106,794 - CA264_09020 0.60 -0.1 2,106,871 + CA264_09020 0.70 +0.3 2,106,926 + CA264_09020 0.77 +0.7 2,106,927 - CA264_09020 0.77 -0.3 2,106,950 + CA264_09020 0.80 -0.6 2,106,951 - CA264_09020 0.80 +0.6 2,107,002 + CA264_09020 0.87 -1.0 2,107,002 + CA264_09020 0.87 +0.3 2,107,002 + CA264_09020 0.87 +1.7 2,107,003 - CA264_09020 0.87 +0.0 2,107,003 - CA264_09020 0.87 -1.5 2,107,016 + CA264_09020 0.88 +0.6 2,107,023 - CA264_09020 0.89 +0.6 2,107,046 + +0.1 2,107,046 + -0.8 2,107,121 - -0.4 2,107,122 + +0.8 2,107,126 + -0.1 2,107,126 + +0.8 2,107,152 - +0.0 2,107,163 - +0.9 2,107,184 + +0.6 2,107,216 + +1.3 2,107,216 + -0.4 2,107,229 + +0.1 2,107,230 - -0.9 2,107,230 - +0.3 2,107,280 - -0.5 2,107,328 - +0.1 2,107,328 - -0.3 2,107,344 + +0.3 2,107,410 + CA264_09025 0.13 +0.9 2,107,410 + CA264_09025 0.13 -0.6 2,107,410 + CA264_09025 0.13 +0.0 2,107,410 + CA264_09025 0.13 -0.4 2,107,410 + CA264_09025 0.13 +0.1 2,107,502 + CA264_09025 0.18 -0.2 2,107,515 - CA264_09025 0.19 +1.8 2,107,515 - CA264_09025 0.19 +1.7 2,107,579 + CA264_09025 0.23 +0.6 2,107,579 + CA264_09025 0.23 +0.4 2,107,580 - CA264_09025 0.23 +0.4 2,107,606 + CA264_09025 0.24 -0.4 2,107,606 + CA264_09025 0.24 +0.2 2,107,669 - CA264_09025 0.28 -0.1 2,107,677 + CA264_09025 0.29 -0.6 2,107,677 + CA264_09025 0.29 +1.5 2,107,678 - CA264_09025 0.29 -1.8 2,107,678 - CA264_09025 0.29 +0.1 2,107,678 - CA264_09025 0.29 -1.9 2,107,682 + CA264_09025 0.29 +0.5 2,107,682 + CA264_09025 0.29 -0.3 2,107,683 - CA264_09025 0.29 -0.0 2,107,683 - CA264_09025 0.29 -0.5 2,107,683 - CA264_09025 0.29 +1.0 2,107,687 + CA264_09025 0.29 -0.1 2,107,687 + CA264_09025 0.29 -0.8 2,107,688 - CA264_09025 0.29 +0.0 2,107,700 + CA264_09025 0.30 +0.2 2,107,711 + CA264_09025 0.31 +0.8 2,107,715 + CA264_09025 0.31 -0.8 2,107,716 - CA264_09025 0.31 +0.3 2,107,716 - CA264_09025 0.31 -0.3 2,107,751 - CA264_09025 0.33 -0.4 2,107,758 + CA264_09025 0.34 +0.1 2,107,758 + CA264_09025 0.34 -0.2 2,107,758 + CA264_09025 0.34 +0.1 2,107,787 + CA264_09025 0.35 -1.0 2,107,826 + CA264_09025 0.38 +0.3 2,107,829 + CA264_09025 0.38 +0.2 2,107,879 + CA264_09025 0.41 +0.3 2,107,882 + CA264_09025 0.41 -0.5 2,107,882 + CA264_09025 0.41 -0.4 2,107,883 - CA264_09025 0.41 -0.4 2,107,883 - CA264_09025 0.41 -0.5 2,107,917 + CA264_09025 0.43 -0.1 2,107,931 + CA264_09025 0.44 +0.2 2,107,931 + CA264_09025 0.44 +0.1 2,107,931 + CA264_09025 0.44 +0.2 2,107,932 - CA264_09025 0.44 +0.3 2,107,932 - CA264_09025 0.44 +0.3 2,108,070 + CA264_09025 0.52 -0.4 2,108,076 - CA264_09025 0.53 +0.4 2,108,100 + CA264_09025 0.54 +0.3 2,108,101 - CA264_09025 0.54 +0.4
Or see this region's nucleotide sequence